Three-way (N-way) fusion of brain imaging data based on mCCA+jICA and its application to discriminating schizophrenia

Multimodal fusion is an effective approach to better understand brain diseases. However, most such instances have been limited to pair-wise fusion; because there are often more than two imaging modalities available per subject, there is a need for approaches that can combine multiple datasets optimally. In this paper, we extended our previous two-way fusion model called "multimodal CCA+joint ICA", to three or N-way fusion, that enables robust identification of correspondence among N data types and allows one to investigate the important question of whether certain disease risk factors are shared or distinct across multiple modalities. We compared "mCCA+jICA" with its alternatives in a 3-way fusion simulation and verified its advantages in both decomposition accuracy and modal linkage detection. We also applied it to real functional Magnetic Resonance Imaging (fMRI)-Diffusion Tensor Imaging (DTI) and structural MRI fusion to elucidate the abnormal architecture underlying schizophrenia (n=97) relative to healthy controls (n=116). Both modality-common and modality-unique abnormal regions were identified in schizophrenia. Specifically, the visual cortex in fMRI, the anterior thalamic radiation (ATR) and forceps minor in DTI, and the parietal lobule, cuneus and thalamus in sMRI were linked and discriminated between patients and controls. One fMRI component with regions of activity in motor cortex and superior temporal gyrus individually discriminated schizophrenia from controls. Finally, three components showed significant correlation with duration of illness (DOI), suggesting that lower gray matter volumes in parietal, frontal, and temporal lobes and cerebellum are associated with increased DOI, along with white matter disruption in ATR and cortico-spinal tracts. Findings suggest that the identified fractional anisotropy changes may relate to the corresponding functional/structural changes in the brain that are thought to play a role in the clinical expression of schizophrenia. The proposed "mCCA+jICA" method showed promise for elucidating the joint or coupled neuronal abnormalities underlying mental illnesses and improves our understanding of the disease process.

[1]  Philip K. McGuire,et al.  Reductions in frontal, temporal and parietal volume associated with the onset of psychosis , 2008, Schizophrenia Research.

[2]  Vince D. Calhoun,et al.  Fusion of fMRI, sMRI, and EEG data using canonical correlation analysis , 2009, 2009 IEEE International Conference on Acoustics, Speech and Signal Processing.

[3]  Hangyi Jiang,et al.  Mapping of functional areas in the human cortex based on connectivity through association fibers. , 2009, Cerebral cortex.

[4]  V. Calhoun,et al.  A Review of Challenges in the Use of fMRI for Disease Classification / Characterization and A Projection Pursuit Application from A Multi-site fMRI Schizophrenia Study , 2008, Brain Imaging and Behavior.

[5]  Karl J. Friston,et al.  Unified segmentation , 2005, NeuroImage.

[6]  Yasuhiro Kawasaki,et al.  Parietal lobe volume deficits in schizophrenia spectrum disorders , 2007, Schizophrenia Research.

[7]  Liberty S. Hamilton,et al.  Alterations in functional activation in euthymic bipolar disorder and schizophrenia during a working memory task , 2009, Human brain mapping.

[8]  Veena Kumari,et al.  Frontal lobe volumes in schizophrenia: effects of stage and duration of illness. , 2006, Journal of psychiatric research.

[9]  Vince D. Calhoun,et al.  A pilot multivariate parallel ICA study to investigate differential linkage between neural networks and genetic profiles in schizophrenia , 2010, NeuroImage.

[10]  Michele T. Diaz,et al.  Voxel-based morphometric multisite collaborative study on schizophrenia. , 2009, Schizophrenia bulletin.

[11]  Timothy Edward John Behrens,et al.  Anatomically related grey and white matter abnormalities in adolescent-onset schizophrenia. , 2007, Brain : a journal of neurology.

[12]  M. First,et al.  Structured clinical interview for DSM-IV axis I disorders : SCID-I: clinical version : administration booklet , 1996 .

[13]  Guinevere F. Eden,et al.  Multivariate analysis of neuronal interactions in the generalized partial least squares framework: simulations and empirical studies , 2003, NeuroImage.

[14]  Karl J. Friston,et al.  Spatial registration and normalization of images , 1995 .

[15]  A. J. Bell,et al.  INDEPENDENT COMPONENT ANALYSIS OF BIOMEDICAL SIGNALS , 2000 .

[16]  James McKirdy,et al.  White matter abnormalities in bipolar disorder and schizophrenia detected using diffusion tensor magnetic resonance imaging. , 2009, Bipolar disorders.

[17]  Edgar Erdfelder,et al.  GPOWER: A general power analysis program , 1996 .

[18]  Michael G. Strintzis,et al.  Optimized transmission of JPEG2000 streams over wireless channels , 2006, IEEE Transactions on Image Processing.

[19]  Ronald Pierson,et al.  Long-term antipsychotic treatment and brain volumes: a longitudinal study of first-episode schizophrenia. , 2011, Archives of general psychiatry.

[20]  Terrence J. Sejnowski,et al.  An Information-Maximization Approach to Blind Separation and Blind Deconvolution , 1995, Neural Computation.

[21]  Giacomo Koch,et al.  Impaired inter-hemispheric facilitatory connectivity in schizophrenia , 2011, Clinical Neurophysiology.

[22]  Tyrone D. Cannon,et al.  Cortex mapping reveals regionally specific patterns of genetic and disease-specific gray-matter deficits in twins discordant for schizophrenia , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[23]  Vince D. Calhoun,et al.  Discriminating schizophrenia and bipolar disorder by fusing fMRI and DTI in a multimodal CCA+ joint ICA model , 2011, NeuroImage.

[24]  N. Andreasen The Scale for the Assessment of Negative Symptoms (SANS): Conceptual and Theoretical Foundations , 1989, British Journal of Psychiatry.

[25]  Vince D. Calhoun,et al.  An ICA-based method for the identification of optimal FMRI features and components using combined group-discriminative techniques , 2009, NeuroImage.

[26]  P. Skudlarski,et al.  Brain Connectivity Is Not Only Lower but Different in Schizophrenia: A Combined Anatomical and Functional Approach , 2010, Biological Psychiatry.

[27]  Leanne M Williams,et al.  Dysregulation of arousal and amygdala-prefrontal systems in paranoid schizophrenia. , 2004, The American journal of psychiatry.

[28]  Mark W. Woolrich,et al.  Linked independent component analysis for multimodal data fusion , 2011, NeuroImage.

[29]  Vince D. Calhoun,et al.  Feature-Based Fusion of Medical Imaging Data , 2009, IEEE Transactions on Information Technology in Biomedicine.

[30]  Andrew Simmons,et al.  Association between a longer duration of illness, age and lower frontal lobe grey matter volume in schizophrenia , 2008, Behavioural Brain Research.

[31]  M Isohanni,et al.  Negative symptoms in schizophrenia—A review , 2008, Nordic journal of psychiatry.

[32]  Vince D. Calhoun,et al.  Human Neuroscience , 2022 .

[33]  P. Danos,et al.  Pathologie des Thalamus und Schizophrenie: Ein überblick , 2004 .

[34]  Vince D Calhoun,et al.  Extracting Intrinsic Functional Networks with Feature-Based Group Independent Component Analysis , 2012, Psychometrika.

[35]  V. Calhoun,et al.  Aberrant localization of synchronous hemodynamic activity in auditory cortex reliably characterizes schizophrenia , 2004, Biological Psychiatry.

[36]  B. O’Donnell,et al.  Steady state responses: electrophysiological assessment of sensory function in schizophrenia. , 2009, Schizophrenia bulletin.

[37]  Vince D. Calhoun,et al.  Identification of Imaging Biomarkers in Schizophrenia: A Coefficient-constrained Independent Component Analysis of the Mind Multi-site Schizophrenia Study , 2010, Neuroinformatics.

[38]  J. Kettenring,et al.  Canonical Analysis of Several Sets of Variables , 2022 .

[39]  Vince D. Calhoun,et al.  Joint Blind Source Separation by Multiset Canonical Correlation Analysis , 2009, IEEE Transactions on Signal Processing.

[40]  Peter A. Calabresi,et al.  Tract probability maps in stereotaxic spaces: Analyses of white matter anatomy and tract-specific quantification , 2008, NeuroImage.

[41]  Rex E. Jung,et al.  Does function follow form?: Methods to fuse structural and functional brain images show decreased linkage in schizophrenia , 2010, NeuroImage.

[42]  P. Matthews,et al.  White matter abnormalities and brain activation in schizophrenia: A combined DTI and fMRI study , 2007, Schizophrenia Research.

[43]  N C Andreasen,et al.  Negative v positive schizophrenia. Definition and validation. , 1982, Archives of general psychiatry.

[44]  Jean-Francois Mangin,et al.  What is the best similarity measure for motion correction in fMRI time series? , 2002, IEEE Transactions on Medical Imaging.

[45]  Vince D. Calhoun,et al.  A CCA+ICA based model for multi-task brain imaging data fusion and its application to schizophrenia , 2010, NeuroImage.

[46]  P. Danos,et al.  [Pathology of the thalamus and schizophrenia--an overview]. , 2004, Fortschritte der Neurologie-Psychiatrie.

[47]  Vince D. Calhoun,et al.  Reactivity of hemodynamic responses and functional connectivity to different states of alpha synchrony: A concurrent EEG-fMRI study , 2010, NeuroImage.

[48]  N. Andreasen,et al.  Anatomic and Functional Variability: The Effects of Filter Size in Group fMRI Data Analysis , 2001, NeuroImage.

[49]  Wei Deng,et al.  Short-term effects of antipsychotic treatment on cerebral function in drug-naive first-episode schizophrenia revealed by "resting state" functional magnetic resonance imaging. , 2010, Archives of general psychiatry.

[50]  Tülay Adali,et al.  Estimating the number of independent components for functional magnetic resonance imaging data , 2007, Human brain mapping.

[51]  M. Casanova,et al.  Is there a neuropathology of schizophrenia? , 1988, Biological Psychiatry.

[52]  G. Gratton,et al.  Combining structural and functional neuroimaging data for studying brain connectivity: a review. , 2008, Psychophysiology.

[53]  Sophia Frangou,et al.  Effect of age at onset of schizophrenia on white matter abnormalities , 2009, British Journal of Psychiatry.

[54]  V. Calhoun,et al.  A Selective Review of Multimodal Fusion Methods in Schizophrenia , 2012, Front. Hum. Neurosci..

[55]  T. Adali,et al.  A feature-based approach to combine functional MRI, structural MRI and EEG brain imaging data , 2006, 2006 International Conference of the IEEE Engineering in Medicine and Biology Society.

[56]  David A. Lewis,et al.  Is There a Neuropathology of Schizophrenia? Recent Findings Converge on Altered Thalamic-Prefrontal Cortical Connectivity , 2000 .

[57]  Vincent A Magnotta,et al.  Global white matter abnormalities in schizophrenia: a multisite diffusion tensor imaging study. , 2011, Schizophrenia bulletin.

[58]  P. Michie,et al.  Spatial Working Memoryand Planning Ability: Contrasts between Schizophreniaand Bipolar i Disorder , 2005, Cortex.

[59]  N. Andreasen Scale for the Assessment of Negative Symptoms , 2014 .

[60]  Lothar R. Schad,et al.  Motor Dysfunction and Sensorimotor Cortex Activation Changes in Schizophrenia: A Study with Functional Magnetic Resonance Imaging , 1999, NeuroImage.

[61]  Richard J. Caselli,et al.  Linking functional and structural brain images with multivariate network analyses: A novel application of the partial least square method , 2009, NeuroImage.

[62]  Mario Dzemidzic,et al.  Resting state corticolimbic connectivity abnormalities in unmedicated bipolar disorder and unipolar depression , 2009, Psychiatry Research: Neuroimaging.

[63]  Vince D. Calhoun,et al.  Effective connectivity analysis of fMRI and MEG data collected under identical paradigms , 2011, Comput. Biol. Medicine.

[64]  J. Pekar,et al.  Method for multimodal analysis of independent source differences in schizophrenia: Combining gray matter structural and auditory oddball functional data , 2006, Human brain mapping.

[65]  Thomas F. Münte,et al.  Microstructural Brain Differences Predict Functional Hemodynamic Responses in a Reward Processing Task , 2010, The Journal of Neuroscience.

[66]  Vince D. Calhoun,et al.  Canonical Correlation Analysis for Data Fusion and Group Inferences , 2010, IEEE Signal Processing Magazine.

[67]  Stephen M Smith,et al.  Correspondence of the brain's functional architecture during activation and rest , 2009, Proceedings of the National Academy of Sciences.

[68]  T. Klingberg,et al.  Combined analysis of DTI and fMRI data reveals a joint maturation of white and grey matter in a fronto-parietal network. , 2003, Brain research. Cognitive brain research.

[69]  Mark A. Elliott,et al.  Auditory Oddball fMRI in Schizophrenia: Association of Negative Symptoms with Regional Hypoactivation to Novel Distractors , 2008, Brain Imaging and Behavior.

[70]  V. Calhoun,et al.  Modulation of temporally coherent brain networks estimated using ICA at rest and during cognitive tasks , 2008, Human brain mapping.