Forward or backward, that is the question: phospholipid trafficking by the Mla system

The distinctive feature of Gram-negative bacteria is the presence of an asymmetric outer membrane (OM), which acts as a permeation barrier blocking the diffusion of noxious components such as antibiotics that could compromise cell survival. The outer membrane has an inner leaflet, mainly formed by phospholipids (PLs), and the outer leaflet, composed of molecules of lipopolysaccharide (LPS). Building this membrane is a very complex process as every OM element needs to be transported from the cytoplasm or the inner membrane and properly placed in the OM. In addition, the asymmetry needs to be maintained to guarantee the barrier function of the membrane. The presence of misplaced PLs in the outer leaflet of the OM causes increased permeability, endangering cell survival. The Mla system (maintenance of OM lipid asymmetry) has been linked to the removal of the misplaced PLs, restoring OM asymmetry. The Mla system has elements in all compartments of the cell envelope: the lipoprotein MlaA in complex with the trimeric porins OmpC/F in the OM, MlaC in the periplasmic space and an ABC transporter in the inner membrane called MlaFEDB. While genetic and structural work suggest that the Mla pathway is retrograde (PL movement from OM to IM), several groups have advocated that transport could happen in an anterograde fashion (from IM to OM). However, recent biochemical studies strongly support retrograde transport. This review provides an overview of the current knowledge of the Mla system from a structural point of view and addresses the latest biochemical findings and their impact in transport directionality.

[1]  N. Coudray,et al.  Structure and mechanism of the bacterial lipid ABC transporter, MlaFEDB. , 2022, Current opinion in structural biology.

[2]  M. Trent,et al.  Absence of YhdP, TamB, and YdbH leads to defects in glycerophospholipid transport and cell morphology in Gram-negative bacteria , 2022, PLoS genetics.

[3]  Shu-Sin Chng,et al.  ATP disrupts lipid-binding equilibrium to drive retrograde transport critical for bacterial outer membrane asymmetry , 2021, Proceedings of the National Academy of Sciences.

[4]  N. Ruiz,et al.  YhdP, TamB, and YdbH Are Redundant but Essential for Growth and Lipid Homeostasis of the Gram-Negative Outer Membrane , 2021, mBio.

[5]  Oriol Vinyals,et al.  Highly accurate protein structure prediction with AlphaFold , 2021, Nature.

[6]  Samuel I. Miller,et al.  Structure and lipid dynamics in the maintenance of lipid asymmetry inner membrane complex of A. baumannii , 2021, Communications biology.

[7]  W. Im,et al.  Structural insight into phospholipid transport by the MlaFEBD complex from P. aeruginosa. , 2021, Journal of molecular biology.

[8]  X. Daura,et al.  The Pseudomonas aeruginosa substrate-binding protein Ttg2D functions as a general glycerophospholipid transporter across the periplasm , 2021, Communications Biology.

[9]  M. Winterhalter,et al.  How to Enter a Bacterium: Bacterial Porins and the Permeation of Antibiotics. , 2021, Chemical reviews.

[10]  OUP accepted manuscript , 2021, Nucleic Acids Research.

[11]  Qiang Zhou,et al.  Cryo-EM structures of Acinetobacter baumannii glycerophospholipid transporter , 2020, Cell discovery.

[12]  Q. Luo,et al.  Structural insights into outer membrane asymmetry maintenance in Gram-negative bacteria by MlaFEDB , 2020, Nature Structural & Molecular Biology.

[13]  D. Kahne,et al.  Assembly and Maintenance of Lipids at the Bacterial Outer Membrane. , 2020, Chemical reviews.

[14]  Qiang Zhou,et al.  Structural mechanism of phospholipids translocation by MlaFEDB complex , 2020, Cell Research.

[15]  M. Powers,et al.  The Mla pathway in Acinetobacter baumannii has no demonstrable role in anterograde lipid transport , 2020, eLife.

[16]  N. Coudray,et al.  Structure of bacterial phospholipid transporter MlaFEDB with substrate bound , 2020, bioRxiv.

[17]  N. Coudray,et al.  Structure of MlaFB uncovers novel mechanisms of ABC transporter regulation , 2020, bioRxiv.

[18]  N. Noinaj,et al.  The big BAM theory: An open and closed case? , 2020, Biochimica et biophysica acta. Biomembranes.

[19]  H. Zgurskaya,et al.  Permeability barriers of Gram‐negative pathogens , 2020, Annals of the New York Academy of Sciences.

[20]  J. Naismith,et al.  Porins and small-molecule translocation across the outer membrane of Gram-negative bacteria , 2019, Nature Reviews Microbiology.

[21]  M. Powers,et al.  Intermembrane transport: Glycerophospholipid homeostasis of the Gram-negative cell envelope , 2019, Proceedings of the National Academy of Sciences.

[22]  Gareth W. Hughes,et al.  Evidence for phospholipid export from the bacterial inner membrane by the Mla ABC transport system , 2019, Nature Microbiology.

[23]  T. Lithgow,et al.  The TAM: A Translocation and Assembly Module of the β-Barrel Assembly Machinery in Bacterial Outer Membranes. , 2019, EcoSal Plus.

[24]  D. Bumann,et al.  A Multidisciplinary Approach toward Identification of Antibiotic Scaffolds for Acinetobacter baumannii. , 2019, Structure.

[25]  Shu-Sin Chng,et al.  Characterization of Interactions and Phospholipid Transfer between Substrate Binding Proteins of the OmpC-Mla System. , 2018, Biochemistry.

[26]  Samuel I. Miller,et al.  The Acinetobacter baumannii Mla system and glycerophospholipid transport to the outer membrane , 2018, bioRxiv.

[27]  N. Ruiz,et al.  Function and Biogenesis of Lipopolysaccharides , 2018, EcoSal Plus.

[28]  D. Holdbrook,et al.  The architecture of the OmpC–MlaA complex sheds light on the maintenance of outer membrane lipid asymmetry in Escherichia coli , 2018, The Journal of Biological Chemistry.

[29]  T. Silhavy,et al.  The Escherichia coli Phospholipase PldA Regulates Outer Membrane Homeostasis via Lipid Signaling , 2018, mBio.

[30]  T. Silhavy,et al.  Making a membrane on the other side of the wall. , 2017, Biochimica et biophysica acta. Molecular and cell biology of lipids.

[31]  M. Bogdanov,et al.  Biogenesis, transport and remodeling of lysophospholipids in Gram-negative bacteria. , 2017, Biochimica et biophysica acta. Molecular and cell biology of lipids.

[32]  D. Bumann,et al.  Structural basis for maintenance of bacterial outer membrane lipid asymmetry , 2017, Nature Microbiology.

[33]  Nathaniel J. Davies,et al.  MCE domain proteins: conserved inner membrane lipid-binding proteins required for outer membrane homeostasis , 2017, Scientific Reports.

[34]  I. Henderson,et al.  Architectures of Lipid Transport Systems for the Bacterial Outer Membrane , 2016, Cell.

[35]  B. Fox,et al.  The Power of Asymmetry: Architecture and Assembly of the Gram-Negative Outer Membrane Lipid Bilayer. , 2016, Annual review of microbiology.

[36]  M. Wenk,et al.  Defining key roles for auxiliary proteins in an ABC transporter that maintains bacterial outer membrane lipid asymmetry , 2016, eLife.

[37]  K. C. Huang,et al.  Disruption of lipid homeostasis in the Gram-negative cell envelope activates a novel cell death pathway , 2016, Proceedings of the National Academy of Sciences.

[38]  R. Benz,et al.  Structure, Dynamics, and Substrate Specificity of the OprO Porin from Pseudomonas aeruginosa. , 2015, Biophysical journal.

[39]  T. Silhavy,et al.  Outer membrane lipoprotein biogenesis: Lol is not the end , 2015, Philosophical Transactions of the Royal Society B: Biological Sciences.

[40]  Z. Chong,et al.  Osmoporin OmpC forms a complex with MlaA to maintain outer membrane lipid asymmetry in Escherichia coli , 2015, Molecular microbiology.

[41]  C. Whitfield,et al.  Biosynthesis and export of bacterial lipopolysaccharides. , 2014, Annual review of biochemistry.

[42]  S. Buchanan,et al.  TonB-dependent transporters: regulation, structure, and function. , 2010, Annual review of microbiology.

[43]  T. Silhavy,et al.  The bacterial cell envelope. , 2010, Cold Spring Harbor perspectives in biology.

[44]  T. Silhavy,et al.  An ABC transport system that maintains lipid asymmetry in the Gram-negative outer membrane , 2009, Proceedings of the National Academy of Sciences.

[45]  L. Dijkhuizen,et al.  The Actinobacterial mce4 Locus Encodes a Steroid Transporter* , 2008, Journal of Biological Chemistry.

[46]  Christoph Benning,et al.  A role for lipid trafficking in chloroplast biogenesis. , 2008, Progress in lipid research.

[47]  Robert E W Hancock,et al.  An arginine ladder in OprP mediates phosphate-specific transfer across the outer membrane , 2006, Nature Structural &Molecular Biology.

[48]  N. Casali,et al.  A phylogenomic analysis of the Actinomycetales mce operons , 2007, BMC Genomics.

[49]  K. Awai,et al.  A phosphatidic acid-binding protein of the chloroplast inner envelope membrane involved in lipid trafficking. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[50]  C. Stead,et al.  Diversity of endotoxin and its impact on pathogenesis. , 2006 .

[51]  H. Nikaido Restoring permeability barrier function to outer membrane. , 2005, Chemistry & biology.

[52]  H. Nikaido Molecular Basis of Bacterial Outer Membrane Permeability Revisited , 2003, Microbiology and Molecular Biology Reviews.

[53]  Samuel I. Miller,et al.  Transfer of palmitate from phospholipids to lipid A in outer membranes of Gram‐negative bacteria , 2000, The EMBO journal.

[54]  N. Dekker Outer‐membrane phospholipase A: known structure, unknown biological function , 2000, Molecular microbiology.

[55]  P. Lasch,et al.  The influence of poly-(L-lysine) and porin on the domain structure of mixed vesicles composed of lipopolysaccharide and phospholipid: an infrared spectroscopic study. , 1998, Biophysical journal.

[56]  C. Raetz,et al.  Biosynthesis and function of phospholipids in Escherichia coli. , 1990, The Journal of biological chemistry.

[57]  H. Nikaido,et al.  Persistence of segregated phospholipid domains in phospholipid--lipopolysaccharide mixed bilayers: studies with spin-labeled phospholipids. , 1981, Biochemistry.

[58]  M. Osborn,et al.  Translocation of phospholipids between the outer and inner membranes of Salmonella typhimurium. , 1977, The Journal of biological chemistry.