Genomic Selective Constraints in Murid Noncoding DNA
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[1] Aleksey Y Ogurtsov,et al. Selection in favor of nucleotides G and C diversifies evolution rates and levels of polymorphism at mammalian synonymous sites. , 2006, Journal of theoretical biology.
[2] S. Boissinot,et al. Fitness cost of LINE-1 (L1) activity in humans. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[3] D. Haussler,et al. A distal enhancer and an ultraconserved exon are derived from a novel retroposon , 2006, Nature.
[4] A. Vinogradov. "Genome design" model: evidence from conserved intronic sequence in human-mouse comparison. , 2006, Genome research.
[5] E. Lander,et al. A large family of ancient repeat elements in the human genome is under strong selection. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[6] L. Hurst,et al. Evidence for purifying selection against synonymous mutations in mammalian exonic splicing enhancers. , 2006, Molecular biology and evolution.
[7] Shamil Sunyaev,et al. Evolutionary constraints in conserved nongenic sequences of mammals. , 2005, Genome research.
[8] N. Bresolin,et al. Fixation of conserved sequences shapes human intron size and influences transposon-insertion dynamics. , 2005, Trends in genetics : TIG.
[9] Jean L. Chang,et al. Initial sequence of the chimpanzee genome and comparison with the human genome , 2005, Nature.
[10] L. Hurst,et al. Evidence for selection on synonymous mutations affecting stability of mRNA secondary structure in mammals , 2005, Genome Biology.
[11] D. Haussler,et al. Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes. , 2005, Genome research.
[12] Daniel J. Gaffney,et al. The scale of mutational variation in the murid genome. , 2005, Genome research.
[13] L. Hurst,et al. Gametophytic Selection in Arabidopsis thaliana Supports the Selective Model of Intron Length Reduction , 2005, PLoS genetics.
[14] S. Batzoglou,et al. Distribution and intensity of constraint in mammalian genomic sequence. , 2005, Genome research.
[15] Hans Ellegren,et al. Male-driven biased gene conversion governs the evolution of base composition in human alu repeats. , 2005, Molecular biology and evolution.
[16] Laurent Duret,et al. Homology-dependent methylation in primate repetitive DNA. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[17] A. Reymond,et al. Conserved non-genic sequences — an unexpected feature of mammalian genomes , 2005, Nature Reviews Genetics.
[18] M. Lercher,et al. Explorer Evidence for Widespread Degradation of Gene Control Regions in Hominid Genomes , 2015 .
[19] Hiroaki Kitano,et al. The PANTHER database of protein families, subfamilies, functions and pathways , 2004, Nucleic Acids Res..
[20] Damian Smedley,et al. Ensembl 2005 , 2004, Nucleic Acids Res..
[21] Dirk Holste,et al. Single Nucleotide Polymorphism–Based Validation of Exonic Splicing Enhancers , 2004, PLoS biology.
[22] L. Hurst,et al. Similar rates but different modes of sequence evolution in introns and at exonic silent sites in rodents: evidence for selectively driven codon usage. , 2004, Molecular biology and evolution.
[23] D. Haussler,et al. Ultraconserved Elements in the Human Genome , 2004, Science.
[24] A. Vinogradov. Compactness of human housekeeping genes: selection for economy or genomic design? , 2004, Trends in genetics : TIG.
[25] Lisa M. D'Souza,et al. Genome sequence of the Brown Norway rat yields insights into mammalian evolution , 2004, Nature.
[26] S. Batzoglou,et al. Characterization of evolutionary rates and constraints in three Mammalian genomes. , 2004, Genome research.
[27] S. Carroll,et al. The regulatory content of intergenic DNA shapes genome architecture , 2004, Genome Biology.
[28] D. Haussler,et al. Article Identification and Characterization of Multi-Species Conserved Sequences , 2022 .
[29] Alexandre Reymond,et al. Evolutionary Discrimination of Mammalian Conserved Non-Genic Sequences (CNGs) , 2003, Science.
[30] Daniel J. Gaffney,et al. Functional constraints and frequency of deleterious mutations in noncoding DNA of rodents , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[31] Araxi O. Urrutia,et al. The signature of selection mediated by expression on human genes. , 2003, Genome research.
[32] Nancy F. Hansen,et al. Comparative analyses of multi-species sequences from targeted genomic regions , 2003, Nature.
[33] E. Levanon,et al. Human housekeeping genes are compact. , 2003, Trends in genetics : TIG.
[34] R. Sorek,et al. Intronic sequences flanking alternatively spliced exons are conserved between human and mouse. , 2003, Genome research.
[35] Erez Y. Levanon,et al. Widespread occurrence of antisense transcription in the human genome , 2003, Nature Biotechnology.
[36] C. V. Jongeneel,et al. Numerous potentially functional but non-genic conserved sequences on human chromosome 21 , 2002, Nature.
[37] S. P. Fodor,et al. Evolutionarily conserved sequences on human chromosome 21. , 2001, Genome research.
[38] P. Keightley,et al. Deleterious mutations and the evolution of sex. , 2000, Science.
[39] T. Jukes,et al. The neutral theory of molecular evolution. , 2000, Genetics.
[40] M. Batzer,et al. Alu repeats and human disease. , 1999, Molecular genetics and metabolism.
[41] Peter D. Keightley,et al. High genomic deleterious mutation rates in hominids , 1999, Nature.
[42] R. Britten,et al. Mobile elements inserted in the distant past have taken on important functions. , 1997, Gene.
[43] Thomas L. Madden,et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.
[44] S. Boissinot,et al. Mutation Pattern Variation Among Regions of the Primate Genome , 1997, Journal of Molecular Evolution.
[45] P. Hanawalt. Transcription-coupled repair and human disease. , 1994, Science.
[46] J. Thompson,et al. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. , 1994, Nucleic acids research.
[47] M. Nei,et al. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. , 1993, Molecular biology and evolution.
[48] Wen-Hsiung Li,et al. Nonrandomness of point mutation as reflected in nucleotide substitutions in pseudogenes and its evolutionary implications , 2005, Journal of Molecular Evolution.
[49] Rat Genome Sequencing Project Consortium. Genome sequence of the Brown Norway rat yields insights into mammalian evolution , 2004 .
[50] K. Holsinger. The neutral theory of molecular evolution , 2004 .
[51] Nicholas L. Bray,et al. AVID: A global alignment program. , 2003, Genome research.
[52] Mouse Genome Sequencing Consortium. Initial sequencing and comparative analysis of the mouse genome , 2002, Nature.
[53] International Human Genome Sequencing Consortium. Initial sequencing and analysis of the human genome , 2001, Nature.
[54] J. Crow,et al. A molecular approach to estimating the human deleterious mutation rate , 1993, Human mutation.
[55] T. Nagylaki. Evolution of a finite population under gene conversion. , 1983, Proceedings of the National Academy of Sciences of the United States of America.