A computational method for the detection of activation/deactivation patterns in biological signals with three levels of electric intensity.

In the present work, we develop a computational technique to approximate the changes of phase in temporal series associated to electric signals of muscles which perform activities at three different levels of intensity. We suppose that the temporal series are samples of independent, normally distributed random variables with mean equal to zero, and variance equal to one of three possible values, each of them associated to a certain degree of electric intensity. For example, these intensity levels may represent a leg muscle at rest, or active during a light activity (walking), or active during a highly demanding performance (jogging). The model is presented as a maximum likelihood problem involving discrete variables. In turn, this problem is transformed into a continuous one via the introduction of continuous variables with penalization parameters, and it is solved recursively through an iterative numerical method. An a posteriori treatment of the results is used in order to avoid the detection of relatively short periods of silence or activity. We perform simulations with synthetic data in order to assess the validity of our technique. Our computational results show that the method approximates well the occurrence of the change points in synthetic temporal series, even in the presence of autocorrelated sequences. In the way, we show that a generalization of a computational technique for the change-point detection of electric signals with two phases of activity (Esquivel-Frausto et al., 2010 [40]), may be inapplicable in cases of temporal series with three levels of intensity. In this sense, the method proposed in the present manuscript improves previous efforts of the authors.

[1]  D Popivanov,et al.  Testing procedures for non-stationarity and non-linearity in physiological signals. , 1999, Mathematical biosciences.

[2]  Edward Carlstein,et al.  Nonparametric Change-Point Estimation for Data from an Ergodic Sequence , 1994 .

[3]  Marc Lavielle,et al.  The Multiple Change-Points Problem for the Spectral Distribution , 2000 .

[4]  Lei Yang,et al.  An Adaptive Algorithm for the Determination of the Onset and Offset of Muscle Contraction by EMG Signal Processing , 2013, IEEE Transactions on Neural Systems and Rehabilitation Engineering.

[5]  John Q. Gan,et al.  Unsupervised movement onset detection from EEG recorded during self-paced real hand movement , 2010, Medical & Biological Engineering & Computing.

[6]  M. Lavielle,et al.  Detection of multiple change-points in multivariate time series , 2006 .

[7]  A H Lang,et al.  Automatic sampling and averaging of electromyographic unit potentials. , 1971, Electroencephalography and clinical neurophysiology.

[8]  Estimation of change point and compound Poisson process parameters for the earthquake data in Turkey , 2009 .

[9]  C. Pekarik,et al.  Organochlorine Contaminants in Herring Gull Eggs from the Great Lakes, 1974-1995: Change Point Regression Analysis and Short-Term Regression , 1998 .

[10]  Jorge Eduardo Macías-Díaz,et al.  Computational approximation of the likelihood ratio for testing the existence of change-points in a heteroscedastic series , 2013 .

[11]  Silvia Conforto,et al.  Automatic detection of surface EMG activation timing using a wavelet transform based method. , 2010, Journal of electromyography and kinesiology : official journal of the International Society of Electrophysiological Kinesiology.

[12]  Edward A. Clancy,et al.  Adaptive whitening of the electromyogram to improve amplitude estimation , 2000, IEEE Transactions on Biomedical Engineering.

[13]  A. F. Smith,et al.  Straight Lines with a Change‐Point: A Bayesian Analysis of Some Renal Transplant Data , 1980 .

[14]  S P Levine,et al.  A direct brain interface based on event-related potentials. , 2000, IEEE transactions on rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society.

[15]  Andreas Schulze-Bonhage,et al.  Grasp Detection from Human ECoG during Natural Reach-to-Grasp Movements , 2013, PloS one.

[16]  H Nissen-Petersen,et al.  A delay line to record random action potentials. , 1969, Electroencephalography and clinical neurophysiology.

[17]  S. Harkema,et al.  A Bayesian change-point analysis of electromyographic data: detecting muscle activation patterns and associated applications. , 2003, Biostatistics.

[18]  Srikesh G Arunajadai A point process driven multiple change point model: a robust resistant approach. , 2009, Mathematical biosciences.

[19]  Venkata K. Jandhyala,et al.  Maximum likelihood estimation of a change-point for exponentially distributed random variables , 2001 .

[20]  David V. Hinkley,et al.  Time-ordered classification , 1972 .

[21]  David V. Hinkley,et al.  Inference about the change-point in a sequence of binomial variables , 1970 .

[22]  Emilie Lebarbier,et al.  Detecting multiple change-points in the mean of Gaussian process by model selection , 2005, Signal Process..

[23]  F. Mohd-Yasin,et al.  Techniques of EMG signal analysis: detection, processing, classification and applications , 2006, Biological Procedures Online.

[24]  J Perry,et al.  The Rancho EMG analyzer: a computerized system for gait analysis. , 1993, Journal of biomedical engineering.

[25]  E. Carlstein Nonparametric Change-Point Estimation , 1988 .

[26]  S. Chib Estimation and comparison of multiple change-point models , 1998 .

[27]  Adrian F. M. Smith Change-Point problems: approaches and applications , 1980 .

[28]  A. Adler,et al.  An improved method for muscle activation detection during gait , 2004, Canadian Conference on Electrical and Computer Engineering 2004 (IEEE Cat. No.04CH37513).

[29]  J. Perry,et al.  Computer algorithms to characterize individual subject EMG profiles during gait. , 1992, Archives of physical medicine and rehabilitation.

[30]  S. Panchapakesan,et al.  Inference about the Change-Point in a Sequence of Random Variables: A Selection Approach , 1988 .

[31]  C. Weilhoefer,et al.  Using change-point analysis and weighted averaging approaches to explore the relationships between common benthic diatoms and in-stream environmental variables in mid-atlantic highlands streams, USA , 2008, Hydrobiologia.

[32]  M. Knaflitz,et al.  A statistical method for the measurement of muscle activation intervals from surface myoelectric signal during gait , 1998, IEEE Transactions on Biomedical Engineering.

[33]  R. Curnow,et al.  Maximum likelihood estimation of multiple change points , 1990 .

[34]  J. Hartigan,et al.  A Bayesian Analysis for Change Point Problems , 1993 .

[35]  C. Loader CHANGE POINT ESTIMATION USING NONPARAMETRIC REGRESSION , 1996 .

[36]  Vladimir N. Minin,et al.  Dual multiple change-point model leads to more accurate recombination detection , 2005, Bioinform..

[37]  Luc Martin,et al.  A method to combine numerical optimization and EMG data for the estimation of joint moments under dynamic conditions. , 2004, Journal of biomechanics.

[38]  Peter R Johnston,et al.  A sensitivity study of conductivity values in the passive bidomain equation. , 2011, Mathematical biosciences.

[39]  M Schmid,et al.  Novel formulation of a double threshold algorithm for the estimation of muscle activation intervals designed for variable SNR environments. , 2012, Journal of electromyography and kinesiology : official journal of the International Society of Electrophysiological Kinesiology.

[40]  J. A. Guerrero,et al.  Activity pattern detection in electroneurographic and electromyogram signals through a heteroscedastic change-point method. , 2010, Mathematical biosciences.

[41]  A. Raftery,et al.  Bayesian analysis of a Poisson process with a change-point , 1986 .

[42]  T. Bollerslev,et al.  Generalized autoregressive conditional heteroskedasticity , 1986 .

[43]  B. Western,et al.  A Bayesian Change Point Model for Historical Time Series Analysis , 2004, Political Analysis.

[44]  M. Suchard,et al.  Phylogenetic Mapping of Recombination Hotspots in Human Immunodeficiency Virus via Spatially Smoothed Change-Point Processes , 2007, Genetics.

[45]  R. Gupta,et al.  Analysis of lognormal survival data. , 1997, Mathematical biosciences.

[46]  S Micera,et al.  Improving detection of muscle activation intervals. , 2001, IEEE engineering in medicine and biology magazine : the quarterly magazine of the Engineering in Medicine & Biology Society.

[47]  Gert Pfurtscheller,et al.  Overt foot movement detection in one single Laplacian EEG derivation , 2008, Journal of Neuroscience Methods.

[48]  G. Cobb The problem of the Nile: Conditional solution to a changepoint problem , 1978 .

[49]  C. Gielen,et al.  Relation between EMG activation patterns and kinematic properties of aimed arm movements. , 1985, Journal of motor behavior.

[50]  David B. Wolfson,et al.  Maximum likelihood estimation in the multi-path change-point problem , 1993 .

[51]  B. S. Darkhovskh A Nonparametric Method for the a Posteriori Detection of the “Disorder” Time of a Sequence of Independent Random Variables , 1976 .

[52]  Daniel Commenges,et al.  Inference about a change point in experimental neurophysiology , 1986 .

[53]  Franck Quaine,et al.  Using EMG data to constrain optimization procedure improves finger tendon tension estimations during static fingertip force production. , 2007, Journal of biomechanics.

[54]  Piecewise exponential survival curves with smooth transitions. , 1994, Mathematical biosciences.

[55]  Javier Navallas,et al.  Mathematical analysis of a muscle architecture model. , 2009, Mathematical biosciences.

[56]  A. N. PETTrrr A Non-parametric Approach to the Change-point Problem , 1979 .

[57]  A. J. Thexton,et al.  A randomisation method for discriminating between signal and noise in recordings of rhythmic electromyographic activity , 1996, Journal of Neuroscience Methods.

[58]  Lester Ingber,et al.  Neocortical dynamics at multiple scales: EEG standing waves, statistical mechanics, and physical analogs. , 2010, Mathematical biosciences.

[59]  Erik J. Scheme,et al.  Whitening of the electromyogram for improved classification accuracy in prosthesis control , 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[60]  D. Andrews Tests for Parameter Instability and Structural Change with Unknown Change Point , 1993 .