Sequence mining and transcript profiling to explore differentially expressed genes associated with lipid biosynthesis during soybean seed development

[1]  Rex T. Nelson,et al.  RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome , 2010, BMC Plant Biology.

[2]  Huanming Yang,et al.  Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome. , 2010, Genome research.

[3]  L. Vodkin,et al.  Flux of transcript patterns during soybean seed development , 2010, BMC Genomics.

[4]  T. Fennell,et al.  Targeted next-generation sequencing of a cancer transcriptome enhances detection of sequence variants and novel fusion transcripts , 2009, Genome Biology.

[5]  Ruibo Hu,et al.  Evaluation of putative reference genes for gene expression normalization in soybean by quantitative real-time RT-PCR , 2009, BMC Molecular Biology.

[6]  B. Williams,et al.  Mapping and quantifying mammalian transcriptomes by RNA-Seq , 2008, Nature Methods.

[7]  M. Gerstein,et al.  The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing , 2008, Science.

[8]  S. Chen,et al.  The soybean Dof-type transcription factor genes, GmDof4 and GmDof11, enhance lipid content in the seeds of transgenic Arabidopsis plants. , 2007, The Plant journal : for cell and molecular biology.

[9]  Dawei Li,et al.  The Genomes of Oryza sativa: A History of Duplications , 2005, PLoS biology.

[10]  Dawei Li,et al.  A Draft Sequence for the Genome of the Domesticated Silkworm ( Bombyx mori ) , 2004 .

[11]  Y. Sasaki,et al.  Plant Acetyl-CoA Carboxylase: Structure, Biosynthesis, Regulation, and Gene Manipulation for Plant Breeding , 2004, Bioscience, biotechnology, and biochemistry.

[12]  D. Craft,et al.  Identification and Characterization of the CYP52 Family of Candida tropicalis ATCC 20336, Important for the Conversion of Fatty Acids and Alkanes to α,ω-Dicarboxylic Acids , 2003, Applied and Environmental Microbiology.

[13]  J. Ohlrogge,et al.  Characterization of substrate specificity of plant FatA and FatB acyl-ACP thioesterases. , 2002, Archives of biochemistry and biophysics.

[14]  Huanming Yang,et al.  A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica) , 2002, Science.

[15]  Huanming Yang,et al.  A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica) , 2002, Science.

[16]  P. Covello,et al.  Seed-specific over-expression of an Arabidopsis cDNA encoding a diacylglycerol acyltransferase enhances seed oil content and seed weight. , 2001, Plant physiology.

[17]  J. Ohlrogge,et al.  Brassicaceae express multiple isoforms of biotin carboxyl carrier protein in a tissue-specific manner. , 2001, Plant physiology.

[18]  P. Edwards,et al.  Overexpression of 3-ketoacyl-acyl-carrier protein synthase IIIs in plants reduces the rate of lipid synthesis. , 2001, Plant physiology.

[19]  M. Mandal,et al.  Cloning of acyl-acyl carrier protein (ACP) thioesterase gene from Brassica juncea. , 2000, Biochemical Society Transactions.

[20]  J. Ohlrogge,et al.  Accumulation of palmitate in Arabidopsis mediated by the acyl-acyl carrier protein thioesterase FATB1. , 2000, Plant physiology.

[21]  J. Simon,et al.  cDNA cloning of Brassica napus malonyl‐CoA:ACP transacylase (MCAT) (fab D) and complementation of an E. coli MCAT mutant , 1998, FEBS letters.

[22]  J. Ohlrogge,et al.  Antisense Expression and Overexpression of Biotin Carboxylase in Tobacco Leaves , 1997, Plant physiology.

[23]  J. Ohlrogge,et al.  Targeting of the Arabidopsis Homomeric Acetyl-Coenzyme A Carboxylase to Plastids of Rapeseeds , 1997, Plant physiology.

[24]  R. Winz,et al.  Isolation of cDNAs from Brassica napus encoding the biotin-binding and transcarboxylase domains of acetyl-CoA carboxylase: assignment of the domain structure in a full-length Arabidopsis thaliana genomic clone. , 1994, Biochemical Journal.

[25]  J. Ohlrogge,et al.  Structure and Expression of an Arabidopsis Acetyl-Coenzyme A Carboxylase Gene , 1994, Plant physiology.

[26]  J. Jaworski,et al.  A Cerulenin Insensitive Short Chain 3-Ketoacyl-Acyl Carrier Protein Synthase in Spinacia oleracea Leaves. , 1989, Plant physiology.

[27]  J. Ohlrogge,et al.  Acyl-Lipid Metabolism , 2013, The arabidopsis book.

[28]  Dong Xiaoli,et al.  Comparative study on determination of seed oil content of energy plants by using NMR and Soxhlet Extraction. , 2011 .

[29]  Zhou Shun-qi.  Primary study on protein and lipid accumulation in high oil content soybean varieties , 2006 .

[30]  D. Hildebrand,et al.  Two soybean seed lipoxygenase nulls accumulate reduced levels of lipoxygenase transcripts , 2004, Plant Molecular Biology.