Multilocus sequence analysis of Treponema denticola strains of diverse origin

[1]  G. Weinstock,et al.  Genetic diversity in Treponema pallidum: implications for pathogenesis, evolution and molecular diagnostics of syphilis and yaws. , 2012, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.

[2]  C. Seers,et al.  Virulence Factors of the Oral Spirochete Treponema denticola , 2011, Journal of dental research.

[3]  C. Hart,et al.  Characterization of Novel Bovine Gastrointestinal Tract Treponema Isolates and Comparison with Bovine Digital Dermatitis Treponemes , 2010, Applied and Environmental Microbiology.

[4]  K. Ishihara.  Virulence factors of Treponema denticola. , 2010, Periodontology 2000.

[5]  R. Darveau,et al.  Periodontitis: a polymicrobial disruption of host homeostasis , 2010, Nature Reviews Microbiology.

[6]  Pablo Librado,et al.  DnaSP v5: a software for comprehensive analysis of DNA polymorphism data , 2009, Bioinform..

[7]  C. Hart,et al.  Treponema pedis sp. nov., a spirochaete isolated from bovine digital dermatitis lesions. , 2009, International journal of systematic and evolutionary microbiology.

[8]  M. Kilian,et al.  Prevalence and distribution of principal periodontal pathogens worldwide. , 2008, Journal of clinical periodontology.

[9]  Joel Dudley,et al.  MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences , 2008, Briefings Bioinform..

[10]  G. Weinstock,et al.  BMC Microbiology BioMed Central , 2007 .

[11]  R. Capone,et al.  Human serum antibodies recognize Treponema denticola Msp and PrtP protease complex proteins. , 2008, Oral microbiology and immunology.

[12]  P. Ocampo,et al.  On the Origin of the Treponematoses: A Phylogenetic Approach , 2008, PLoS neglected tropical diseases.

[13]  Palle Villesen,et al.  FaBox: an online toolbox for fasta sequences , 2007 .

[14]  D. Caugant,et al.  fimA Genotypes and Multilocus Sequence Types of Porphyromonas gingivalis from Patients with Periodontitis , 2007, Journal of Clinical Microbiology.

[15]  C. Fraser,et al.  Sequences, sequence clusters and bacterial species , 2006, Philosophical Transactions of the Royal Society B: Biological Sciences.

[16]  G. Baranton,et al.  Delineation of Borrelia burgdorferi sensu lato species by multilocus sequence analysis and confirmation of the delineation of Borrelia spielmanii sp. nov. , 2006, International journal of systematic and evolutionary microbiology.

[17]  A. V. van Winkelhoff,et al.  Multilocus Sequence Typing of Porphyromonas gingivalis Strains from Different Geographic Origins , 2006, Journal of Clinical Microbiology.

[18]  P. Petersen,et al.  Strengthening the prevention of periodontal disease: the WHO approach. , 2005, Journal of periodontology.

[19]  J. Fenno.  Laboratory Maintenance of Treponema denticola , 2005, Current protocols in microbiology.

[20]  D. Gevers,et al.  Phylogeny and Molecular Identification of Vibrios on the Basis of Multilocus Sequence Analysis , 2005, Applied and Environmental Microbiology.

[21]  D. Gevers,et al.  Re-evaluating prokaryotic species , 2005, Nature Reviews Microbiology.

[22]  B. Stevenson,et al.  Current Protocols in Microbiology , 2005 .

[23]  D. Gevers,et al.  Application of multilocus sequence analysis (MLSA) for rapid identification of Enterococcus species based on rpoA and pheS genes. , 2005, Microbiology.

[24]  S. Holt,et al.  Porphyromonas gingivalis, Treponema denticola, and Tannerella forsythia: the "red complex", a prototype polybacterial pathogenic consortium in periodontitis. , 2005, Periodontology 2000.

[25]  S. Socransky,et al.  Periodontal microbial ecology. , 2005, Periodontology 2000.

[26]  R. Ellen,et al.  Spirochetes at the forefront of periodontal infections. , 2005, Periodontology 2000.

[27]  A. Edwards,et al.  Binding Properties and Adhesion-Mediating Regions of the Major Sheath Protein of Treponema denticola ATCC 35405 , 2005, Infection and Immunity.

[28]  C. Fraser,et al.  Fuzzy species among recombinogenic bacteria , 2005, BMC Biology.

[29]  Sergei L. Kosakovsky Pond,et al.  HyPhy: hypothesis testing using phylogenies , 2005, Bioinform..

[30]  Howard Ochman,et al.  Identification and phylogenetic sorting of bacterial lineages with universally conserved genes and proteins. , 2004, Environmental microbiology.

[31]  U. Göbel,et al.  Treponema putidum sp. nov., a medium-sized proteolytic spirochaete isolated from lesions of human periodontitis and acute necrotizing ulcerative gingivitis. , 2004, International journal of systematic and evolutionary microbiology.

[32]  G. Weinstock,et al.  Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[33]  T. Thurnheer,et al.  Gingival crevice microbiota from Chinese patients with gingivitis or necrotizing ulcerative gingivitis. , 2004, European journal of oral sciences.

[34]  H. Karch,et al.  Multilocus sequence analysis of Porphyromonas gingivalis indicates frequent recombination. , 2003, Microbiology.

[35]  John P. Huelsenbeck,et al.  MrBayes 3: Bayesian phylogenetic inference under mixed models , 2003, Bioinform..

[36]  F. Dewhirst,et al.  Prevalent Bacterial Species and Novel Phylotypes in Advanced Noma Lesions , 2002, Journal of Clinical Microbiology.

[37]  W. Loesche,et al.  Periodontal Disease as a Specific, albeit Chronic, Infection: Diagnosis and Treatment , 2001, Clinical Microbiology Reviews.

[38]  I. Longden,et al.  EMBOSS: the European Molecular Biology Open Software Suite. , 2000, Trends in genetics : TIG.

[39]  R. Ericson,et al.  The diversity of periodontal spirochetes by 16S rRNA analysis. , 2000, Oral microbiology and immunology.

[40]  C. Wyss.  Flagellins, but Not Endoflagellar Sheath Proteins, of Treponema pallidum and of Pathogen-Related Oral Spirochetes Are Glycosylated , 1998, Infection and Immunity.

[41]  W. Leung,et al.  Conservation of msp, the gene encoding the major outer membrane protein of oral Treponema spp , 1997, Journal of bacteriology.

[42]  D. Caugant,et al.  Population genetic analysis of oral treponemes by multilocus enzyme electrophoresis. , 1995, Oral microbiology and immunology.

[43]  F E Dewhirst,et al.  Diversity of cultivable and uncultivable oral spirochetes from a patient with severe destructive periodontitis , 1994, Infection and immunity.

[44]  T. Keng,et al.  Treponema denticola (ex Brumpt 1925) sp. nov., nom. rev., and identification of new spirochete isolates from periodontal pockets. , 1993, International journal of systematic bacteriology.

[45]  S. Kokeguchi,et al.  Molecular cloning and sequence analysis of antigen gene tdpA of Treponema denticola , 1991, Infection and immunity.

[46]  S. Holt,et al.  Interaction of Treponema denticola TD-4, GM-1, and MS25 with human gingival fibroblasts , 1990, Infection and immunity.

[47]  J. S. Hoeven,et al.  Development of Periodontal Microflora on Human Serum , 1989 .

[48]  P. F. ter Steeg,et al.  Modelling the Gingival Pocket by Enrichment of Subgingival Microflora in Human Serum in Chemostats , 1988 .

[49]  H. Morton,et al.  Quantitative relationship of Treponema denticola to severity of periodontal disease , 1988, Infection and immunity.

[50]  L. Simonson,et al.  Monoclonal antibodies that recognize a specific surface antigen of Treponema denticola , 1988, Infection and immunity.

[51]  S. Cheng,et al.  Comparative study of six random oral spirochete isolates. Serological heterogeneity of Treponema denticola. , 1985, Journal of periodontal research.

[52]  A. Allen,et al.  Detection of oral anaerobic spirochetes in dental plaque by the indirect fluorescent-antibody technique , 1979, Journal of clinical microbiology.

[53]  S. Socransky,et al.  Morphological and Biochemical Differentiation of Three Types of Small Oral Spirochetes , 1969, Journal of bacteriology.

[54]  P. Vinuesa.  Multilocus Sequence Analysis and Bacterial Species Phylogeny Estimation , 2010 .

[55]  R. Papke,et al.  Molecular phylogeny of microorganisms , 2010 .

[56]  Julio A. Rozas Liras,et al.  DnaSP v 5 : a software for comprehensive analysis of DNA polymorphism data , 2009 .

[57]  Derrick J. Zwickl.  Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion , 2006 .

[58]  David Posada,et al.  Using models of nucleotide evolution to build phylogenetic trees. , 2005, Developmental and comparative immunology.

[59]  Tom Coenye,et al.  Opinion: Re-evaluating prokaryotic species. , 2005, Nature reviews. Microbiology.

[60]  R. B. Hespell,et al.  Amino acid and glucose fermentation by Treponema denticola , 2004, Archiv für Mikrobiologie.

[61]  M. Sela,et al.  Role of Treponema denticola in periodontal diseases. , 2001, Critical reviews in oral biology and medicine : an official publication of the American Association of Oral Biologists.

[62]  U. Göbel,et al.  Proteolytic activity among various oral Treponema species and cloning of a prtP-like gene of Treponema socranskii subsp. socranskii. , 2001, FEMS Microbiology Letters.

[63]  T. A. Hall,et al.  BIOEDIT: A USER-FRIENDLY BIOLOGICAL SEQUENCE ALIGNMENT EDITOR AND ANALYSIS PROGRAM FOR WINDOWS 95/98/ NT , 1999 .

[64]  David Posada,et al.  MODELTEST: testing the model of DNA substitution , 1998, Bioinform..

[65]  F. Mikx.  Comparison of peptidase, glycosidase and esterase activities of oral and non-oral Treponema species. , 1991, Journal of general microbiology.

[66]  W. Ketterl.  [Periodontal diseases]. , 1971, Der Zahnarzt; Colloquium med. dent.

[67]  B. Birren,et al.  Bmc Microbiology , 2006 .