Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume

[1]  David L. Valentine,et al.  A Persistent Oxygen Anomaly Reveals the Fate of Spilled Methane in the Deep Gulf of Mexico , 2011, Science.

[2]  David L. Valentine,et al.  Propane Respiration Jump-Starts Microbial Response to a Deep Oil Spill , 2010, Science.

[3]  P. D’haeseleer,et al.  Deep-Sea Oil Plume Enriches Indigenous Oil-Degrading Bacteria , 2010, Science.

[4]  A. Mascarelli Deepwater Horizon: After the oil , 2010, Nature.

[5]  A. Mascarelli Extent of lingering Gulf oil plume revealed , 2010 .

[6]  Eli Kintisch,et al.  Gulf oil spill. Will Deepwater Horizon set a new standard for catastrophe? , 2010, Science.

[7]  Christopher L. Hemme,et al.  GeoChip 3.0 as a high-throughput tool for analyzing microbial community composition, structure and functional activity , 2010, The ISME Journal.

[8]  R. Castro,et al.  Tracking Hydrocarbon Plume Transport and Biodegradation at Deepwater Horizon , 2010 .

[9]  F. Rojo,et al.  Oil Degraders as Pathogens , 2010 .

[10]  K. Timmis Handbook of hydrocarbon and lipid microbiology , 2010 .

[11]  Jizhong Zhou,et al.  Development of a Common Oligonucleotide Reference Standard for Microarray Data Normalization and Comparison across Different Microbial Communities , 2009, Applied and Environmental Microbiology.

[12]  Charles T. Garten,et al.  Spatial scaling of functional gene diversity across various microbial taxa , 2008, Proceedings of the National Academy of Sciences.

[13]  J. Paul Prophages in marine bacteria: dangerous molecular time bombs or the key to survival in the seas? , 2008, The ISME Journal.

[14]  A. K. Rowan,et al.  Crude-oil biodegradation via methanogenesis in subsurface petroleum reservoirs , 2008, Nature.

[15]  M. Blumenberg,et al.  Anaerobic oxidation of short-chain hydrocarbons by marine sulphate-reducing bacteria , 2007, Nature.

[16]  T. Lueders,et al.  The use of stable isotope probing to identify key iron-reducing microorganisms involved in anaerobic benzene degradation , 2007, The ISME Journal.

[17]  S. Bordenave,et al.  Effects of Heavy Fuel Oil on the Bacterial Community Structure of a Pristine Microbial Mat , 2007, Applied and Environmental Microbiology.

[18]  M. Boufadel,et al.  Effects of chemical dispersants and mineral fines on crude oil dispersion in a wave tank under breaking waves. , 2007, Marine pollution bulletin.

[19]  E. Turiel The Development of Morality , 2007 .

[20]  Christopher W. Schadt,et al.  Microarray-Based Analysis of Subnanogram Quantities of Microbial Community DNAs by Using Whole-Community Genome Amplification , 2006, Applied and Environmental Microbiology.

[21]  W. Röling,et al.  Marine microorganisms make a meal of oil , 2006, Nature Reviews Microbiology.

[22]  Yiqi Luo,et al.  Elevated CO2 stimulates net accumulations of carbon and nitrogen in land ecosystems: a meta-analysis. , 2006, Ecology.

[23]  J. Tiedje,et al.  Biogeography: An Emerging Cornerstone for Understanding Prokaryotic Diversity, Ecology, and Evolution , 2007, Microbial Ecology.

[24]  D. Jones,et al.  Anaerobic hydrocarbon biodegradation in deep subsurface oil reservoirs , 2004, Nature.

[25]  Rebecca E Parales,et al.  Biocatalytic degradation of pollutants. , 2004, Current opinion in biotechnology.

[26]  S Miyano,et al.  Open source clustering software. , 2004, Bioinformatics.

[27]  Shigeaki Harayama,et al.  Microbial communities in oil-contaminated seawater. , 2004, Current opinion in biotechnology.

[28]  Ian M. Head,et al.  Biological activity in the deep subsurface and the origin of heavy oil , 2003, Nature.

[29]  L. Young,et al.  Anaerobic Transformation of Alkanes to Fatty Acids by a Sulfate-Reducing Bacterium, Strain Hxd3 , 2003, Applied and Environmental Microbiology.

[30]  Ian M. Head,et al.  The controls on the composition of biodegraded oils in the deep subsurface - part 1: biodegradation rates in petroleum reservoirs , 2003 .

[31]  A. Butler,et al.  Petrobactin, a photoreactive siderophore produced by the oil-degrading marine bacterium Marinobacter hydrocarbonoclasticus. , 2002, Journal of the American Chemical Society.

[32]  A. Butler,et al.  Photochemical cycling of iron in the surface ocean mediated by microbial iron(iii)-binding ligands , 2001, Nature.

[33]  F. Widdel,et al.  Anaerobic biodegradation of saturated and aromatic hydrocarbons. , 2001, Current opinion in biotechnology.

[34]  Marti J. Anderson,et al.  A new method for non-parametric multivariate analysis of variance in ecology , 2001 .

[35]  R. Meckenstock,et al.  Anaerobic Naphthalene Degradation by a Sulfate-Reducing Enrichment Culture , 2000, Applied and Environmental Microbiology.

[36]  J. Paul,et al.  Prophage Induction of Indigenous Marine Lysogenic Bacteria by Environmental Pollutants , 1998 .

[37]  Sunny C. Jiang,et al.  Characterization of Marine Temperate Phage-Host Systems Isolated from Mamala Bay, Oahu, Hawaii , 1998, Applied and Environmental Microbiology.

[38]  K. R. Clarke,et al.  Non‐parametric multivariate analyses of changes in community structure , 1993 .

[39]  R. Cabrera,et al.  Rapid direct determination of ammonium and nitrate in soil and plant tissue extracts , 1990 .

[40]  A. E. Greenberg,et al.  Standard methods for the examination of water and wastewater : supplement to the sixteenth edition , 1988 .

[41]  Keki B. Irani,et al.  Evaluation and Optimization , 1977, VLDB.

[42]  R. Mah,et al.  Acridine orange-epifluorescence technique for counting bacteria in natural waters. , 1973, Transactions of the American Microscopical Society.