Meeting report of the third annual Tri-Service Microbiome Consortium symposium
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Jason W. Soares | Nancy Kelley-Loughnane | Aarti Gautam | Camilla A. Mauzy | Andrew J. Hoisington | J. Philip Karl | Robyn A. Barbato | Laurel A. Doherty | Sarah M. Glaven | Robert J. Kokoska | Dagmar Leary | Rebecca L. Mickol | Matthew A. Perisin | Edward J. Van Opstal | Vanessa Varaljay | Michael S. Goodson | Dagmar H. Leary | A. Hoisington | J. Soares | J. Karl | V. Varaljay | N. Kelley-Loughnane | A. Gautam | Edward J. van Opstal | R. Barbato | R. Kokoska | C. Mauzy | M. Goodson | R. Mickol
[1] John E. Anderson,et al. Linking vegetation cover and seasonal thaw depths in interior Alaska permafrost terrains using remote sensing , 2019, Remote Sensing of Environment.
[2] Jennifer Barrila,et al. Microbiology of the Built Environment in Spacecraft Used for Human Flight , 2018 .
[3] T. Fukami,et al. Ectomycorrhizal fungal traits reflect environmental conditions along a coastal California edaphic gradient. , 2014, FEMS microbiology ecology.
[4] Jennifer Lu,et al. Improved metagenomic analysis with Kraken 2 , 2019, Genome Biology.
[5] C. Jung,et al. Effects of acute exposures of 2,4,6-trinitrotoluene and inorganic lead on the fecal microbiome of the green anole (Anolis carolinensis) , 2018, PloS one.
[6] Andrew J. Hoisington,et al. Military-Related Exposures, Social Determinants of Health, and Dysbiosis: The United States-Veteran Microbiome Project (US-VMP) , 2018, Front. Cell. Infect. Microbiol..
[7] Dagmar H. Leary,et al. Integrated metagenomic and metaproteomic analyses of marine biofilm communities , 2014, Biofouling.
[8] P. Sims,et al. Spatial metagenomic characterization of microbial biogeography in the gut , 2019, Nature Biotechnology.
[9] M. Betenbaugh,et al. Environmental stimuli drive a transition from cooperation to competition in synthetic phototrophic communities , 2019, Nature Microbiology.
[10] T. Fukami,et al. Mycorrhizal co-invasion and novel interactions depend on neighborhood context. , 2015, Ecology.
[11] Robert A. Player,et al. A diet of U.S. military food rations alters gut microbiota composition and does not increase intestinal permeability. , 2019, The Journal of nutritional biochemistry.
[12] Florian P Breitwieser,et al. Pavian: interactive analysis of metagenomics data for microbiome studies and pathogen identification , 2019, Bioinform..
[13] G. Reid,et al. Probiotics and prebiotics in intestinal health and disease: from biology to the clinic , 2019, Nature Reviews Gastroenterology & Hepatology.
[14] G. Ballard,et al. Identification of an avian polyomavirus associated with Adélie penguins (Pygoscelis adeliae). , 2015, The Journal of general virology.
[15] Laurel A. Doherty,et al. Acute stressor alters inter-species microbial competition for resistant starch-supplemented medium , 2018, Gut microbes.
[16] Sean P. Gilmore,et al. Top-down Enrichment Guides in Formation of Synthetic Microbial Consortia for Biomass Degradation. , 2019, ACS synthetic biology.
[17] C. Jung,et al. Effects of chitin and temperature on sub-Arctic soil microbial and fungal communities and biodegradation of hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) and 2,4-dinitrotoluene (DNT) , 2019, Biodegradation.
[18] Xuefeng “Nick” Peng,et al. Microbial communities for bioprocessing: lessons learned from nature , 2016 .
[19] J. Soares,et al. The current state and future direction of DoD gut microbiome research: a summary of the first DoD gut microbiome informational meeting , 2018, Standards in Genomic Sciences.
[20] Harris H. Wang,et al. Scalable and cost-effective ribonuclease-based rRNA depletion for transcriptomics , 2019, bioRxiv.
[21] S. Montain,et al. Changes in intestinal microbiota composition and metabolism coincide with increased intestinal permeability in young adults under prolonged physiological stress. , 2017, American journal of physiology. Gastrointestinal and liver physiology.
[22] Harris H. Wang,et al. Metagenomic engineering of the mammalian gut microbiome in situ , 2018, Nature Methods.
[23] J. Karl,et al. Intestinal in vitro and ex vivo Models to Study Host-Microbiome Interactions and Acute Stressors , 2018, Front. Physiol..
[24] Kevin V. Solomon,et al. Early-branching gut fungi possess a large, comprehensive array of biomass-degrading enzymes , 2016, Science.
[25] R. Dickson. The Lung Microbiome and ARDS. It Is Time to Broaden the Model. , 2017, American journal of respiratory and critical care medicine.
[26] F. Martinez,et al. The Microbiome and the Respiratory Tract. , 2016, Annual review of physiology.
[27] Christian Munck,et al. Recording mobile DNA in the gut microbiota using an Escherichia coli CRISPR-Cas spacer acquisition platform , 2020, Nature Communications.
[28] Claire E. Berryman,et al. Associations between the gut microbiota and host responses to high altitude , 2018, American journal of physiology. Gastrointestinal and liver physiology.
[29] William A. Walters,et al. Multi-Body-Site Microbiome and Culture Profiling of Military Trainees Suffering from Skin and Soft Tissue Infections at Fort Benning, Georgia , 2016, mSphere.
[30] Hilde van der Togt,et al. Publisher's Note , 2003, J. Netw. Comput. Appl..
[31] D. Karig,et al. Trait-based analysis of the human skin microbiome , 2019, Microbiome.
[32] M. Neubert,et al. Multiple Friends with Benefits: An Optimal Mutualist Management Strategy? , 2016, The American Naturalist.
[33] P. Wilmes,et al. A Dietary Fiber-Deprived Gut Microbiota Degrades the Colonic Mucus Barrier and Enhances Pathogen Susceptibility , 2016, Cell.
[34] Erica M. Hartmann,et al. Antimicrobial Chemicals Are Associated with Elevated Antibiotic Resistance Genes in the Indoor Dust Microbiome , 2016, Environmental science & technology.
[35] D. Ainley,et al. Viruses associated with Antarctic wildlife: From serology based detection to identification of genomes using high throughput sequencing , 2017, Virus Research.
[36] J. Soares,et al. Evaluation of Probiotics for Warfighter Health and Performance , 2020, Frontiers in Nutrition.
[37] C. Lowry,et al. Growing literature but limited evidence: A systematic review regarding prebiotic and probiotic interventions for those with traumatic brain injury and/or posttraumatic stress disorder , 2017, Brain, Behavior, and Immunity.
[38] Karsten Zengler,et al. Modelling approaches for studying the microbiome , 2019, Nature Microbiology.
[39] R. Malmstrom,et al. Visualizing in situ translational activity for identifying and sorting slow-growing archaeal−bacterial consortia , 2016, Proceedings of the National Academy of Sciences.
[40] Akira A Shishido,et al. Trial Evaluating Ambulatory Therapy of Travelers’ Diarrhea (TrEAT TD) Study: A Randomized Controlled Trial Comparing 3 Single-Dose Antibiotic Regimens With Loperamide , 2017, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.
[41] Steven Salzberg,et al. Bracken: Estimating species abundance in metagenomics data , 2016, bioRxiv.
[42] J. Gilbert,et al. Impacts of indoor surface finishes on bacterial viability , 2019, Indoor air.
[43] Andrew J. Hoisington,et al. Longitudinal homogenization of the microbiome between both occupants and the built environment in a cohort of United States Air Force Cadets , 2019, Microbiome.
[44] Daniel N. Baker,et al. KrakenUniq: confident and fast metagenomics classification using unique k-mer counts , 2018, Genome Biology.
[45] Sarah M. Strycharz-Glaven,et al. Microbial Electrochemical Energy Storage and Recovery in a Combined Electrotrophic and Electrogenic Biofilm , 2017 .
[46] Laurel A. Doherty,et al. Effects of Psychological, Environmental and Physical Stressors on the Gut Microbiota , 2018, Front. Microbiol..
[47] T. Douglas,et al. The role of changing temperature in microbial metabolic processes during permafrost thaw , 2020, PloS one.
[48] M. Jett,et al. Altered fecal microbiota composition in all male aggressor‐exposed rodent model simulating features of post‐traumatic stress disorder , 2018, Journal of neuroscience research.
[49] Erica M. Hartmann,et al. Pangenomic Approach To Understanding Microbial Adaptations within a Model Built Environment, the International Space Station, Relative to Human Hosts and Soil , 2019, mSystems.
[50] S. Salzberg,et al. Centrifuge: rapid and sensitive classification of metagenomic sequences , 2016, bioRxiv.
[51] Glenn R. Gibson,et al. The International Scientific Association for Probiotics and Prebiotics ( ISAPP ) consensus statement on the definition and scope of prebiotics , 2018 .
[52] Brittany L. Lenz,et al. Temporal shifts in the collective dermatologic microbiome of military trainees , 2019, Clinical, cosmetic and investigational dermatology.
[53] Alexander G. McFarland,et al. Antimicrobial Chemicals Associate with Microbial Function and Antibiotic Resistance Indoors , 2018, mSystems.
[54] Matthew A. Perisin,et al. Human gut microbe co-cultures have greater potential than monocultures for food waste remediation to commodity chemicals , 2018, Scientific Reports.
[55] Aarti Gautam,et al. Department of Defense Microbiome Research: A Summary of the Second Annual DOD Tri-Service Microbiome Consortium Informational Meeting , 2020 .
[56] D. Merrell,et al. Correlation between Nasal Microbiome Composition and Remote Purulent Skin and Soft Tissue Infections , 2014, Infection and Immunity.
[57] Jason W. Soares,et al. The Current and Future State of Department of Defense (DoD) Microbiome Research: a Summary of the Inaugural DoD Tri-Service Microbiome Consortium Informational Meeting , 2018, mSystems.
[58] Justin C. Biffinger,et al. Carbon Catabolite Repression and Impranil Polyurethane Degradation in Pseudomonas protegens Strain Pf-5 , 2016, Applied and Environmental Microbiology.