Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
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Kazuho Ikeo | Yoshio Tateno | Takashi Gojobori | Roberto A Barrero | Matthew Bellgard | Gabriel Keeble-Gagnère | Paula Moolhuijzen | Y. Tateno | T. Gojobori | K. Ikeo | F. Guerrero | R. Barrero | M. Bellgard | G. Keeble-Gagnère | P. Moolhuijzen | Paula M. Moolhuijzen | Bing Zhang | Felix D Guerrero | Ala Lew-Tabor | Bing Zhang | A. Lew-Tabor
[1] Dan Graur,et al. Neutral evolution of robustness in Drosophila microRNA precursors. , 2011, Molecular biology and evolution.
[2] Peer Bork,et al. Ancient animal microRNAs and the evolution of tissue identity , 2010, Nature.
[3] G. Hannon,et al. Evolutionary flux of canonical microRNAs and mirtrons in Drosophila , 2010, Nature Genetics.
[4] N. Park,et al. Salivary microRNA: Discovery, Characterization, and Clinical Utility for Oral Cancer Detection , 2009, Clinical Cancer Research.
[5] Jonathan R. Clark,et al. Alterations in miRNA processing and expression in pleomorphic adenomas of the salivary gland , 2009, International journal of cancer.
[6] Richard Durbin,et al. Sequence analysis Fast and accurate short read alignment with Burrows – Wheeler transform , 2009 .
[7] Benjamin M. Wheeler,et al. The deep evolution of metazoan microRNAs , 2009, Evolution & development.
[8] Cole Trapnell,et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome , 2009, Genome Biology.
[9]
R. Durbin,et al.
Mapping Quality Scores Mapping Short Dna Sequencing Reads and Calling Variants Using P ,
2022
.
[10]
Joel Dudley,et al.
MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences
,
2008,
Briefings Bioinform..
[11]
V. Ambros,et al.
Drosophila let-7 microRNA is required for remodeling of the neuromusculature during metamorphosis.
,
2008,
Genes & development.
[12]
Robert J. Moore,et al.
A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach.
,
2008,
Genome research.
[13]
J. Cotton,et al.
The Ediacaran emergence of bilaterians: congruence between the genetic and the geological fossil records
,
2008,
Philosophical Transactions of the Royal Society B: Biological Sciences.
[14]
G. Daley,et al.
Selective Blockade of MicroRNA Processing by Lin28
,
2008,
Science.
[15]
Hong Duan,et al.
The regulatory activity of microRNA* species has substantial influence on microRNA and 3′ UTR evolution
,
2008,
Nature Structural &Molecular Biology.
[16]
N. Rajewsky,et al.
Discovering microRNAs from deep sequencing data using miRDeep
,
2008,
Nature Biotechnology.
[17]
Ruiqiang Li,et al.
SOAP: short oligonucleotide alignment program
,
2008,
Bioinform..
[18]
Philip C. J. Donoghue,et al.
MicroRNAs and the advent of vertebrate morphological complexity
,
2008,
Proceedings of the National Academy of Sciences.
[19]
Harrison W. Gabel,et al.
MicroRNA‐183 family conservation and ciliated neurosensory organ expression
,
2008,
Evolution & development.
[20]
Stijn van Dongen,et al.
miRBase: tools for microRNA genomics
,
2007,
Nucleic Acids Res..
[21]
M. Hoy,et al.
First divergence time estimate of spiders, scorpions, mites and ticks (subphylum: Chelicerata) inferred from mitochondrial phylogeny
,
2008,
Experimental and Applied Acarology.
[22]
Michael Q. Zhang,et al.
Using quality scores and longer reads improves accuracy of Solexa read mapping
,
2008,
BMC Bioinformatics.
[23]
Rodrigo Lopez,et al.
Clustal W and Clustal X version 2.0
,
2007,
Bioinform..
[24]
Christophe Antoniewski,et al.
MicroRNAs in Drosophila: the magic wand to enter the Chamber of Secrets?
,
2007,
Biochimie.
[25]
V. Nene,et al.
Tick genomics: the Ixodes genome project and beyond.
,
2007,
International journal for parasitology.
[26]
Chaoqian Xu,et al.
The muscle-specific microRNAs miR-1 and miR-133 produce opposing effects on apoptosis by targeting HSP60, HSP70 and caspase-9 in cardiomyocytes
,
2007,
Journal of Cell Science.
[27]
C. Cole,et al.
Phylogenetic distribution of microRNAs supports the basal position of acoel flatworms and the polyphyly of Platyhelminthes
,
2007,
Evolution & development.
[28]
M. Nei,et al.
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.
,
2007,
Molecular biology and evolution.
[29]
Peng Jiang,et al.
MiPred: classification of real and pseudo microRNA precursors using random forest prediction model with combined features
,
2007,
Nucleic Acids Res..
[30]
I. da Silva Vaz,et al.
Cell death during preoviposition period in Boophilus microplus tick.
,
2007,
Veterinary parasitology.
[31]
Lena Smirnova,et al.
The FASEB Journal • Research Communication Post-transcriptional regulation of the let-7 microRNA during neural cell specification
,
2022
.
[32]
I. da Silva Vaz,et al.
Oxidative stress impairs heme detoxification in the midgut of the cattle tick, Rhipicephalus (Boophilus) microplus.
,
2007,
Molecular and biochemical parasitology.
[33]
T. Rana,et al.
Illuminating the silence: understanding the structure and function of small RNAs
,
2007,
Nature Reviews Molecular Cell Biology.
[34]
Joel S Parker,et al.
Extensive post-transcriptional regulation of microRNAs and its implications for cancer.
,
2006,
Genes & development.
[35]
M. Sorgine,et al.
Insect Biochemistry and Molecular Biology Minireview Adaptations against Heme Toxicity in Blood-feeding Arthropods
,
2022
.
[36]
Jian-Fu Chen,et al.
The role of microRNA-1 and microRNA-133 in skeletal muscle proliferation and differentiation
,
2006,
Nature Genetics.
[37]
K. Turksen,et al.
Isolation and characterization
,
2006
.
[38]
F. Jongejan,et al.
The Known Distribution and Ecological Preferences of the Tick Subgenus Boophilus (Acari: Ixodidae) in Africa and Latin America
,
2006,
Experimental & Applied Acarology.
[39]
C. Burge,et al.
The Widespread Impact of Mammalian MicroRNAs on mRNA Repression and Evolution
,
2005,
Science.
[40]
V. Kim.
MicroRNA biogenesis: coordinated cropping and dicing
,
2005,
Nature Reviews Molecular Cell Biology.
[41]
D. Bartel,et al.
Microarray profiling of microRNAs reveals frequent coexpression with neighboring miRNAs and host genes.
,
2005,
RNA.
[42]
R. Russell,et al.
Principles of MicroRNA–Target Recognition
,
2005,
PLoS biology.
[43]
C. Burge,et al.
Conserved Seed Pairing, Often Flanked by Adenosines, Indicates that Thousands of Human Genes are MicroRNA Targets
,
2005,
Cell.
[44]
D. Bartel.
MicroRNAs Genomics, Biogenesis, Mechanism, and Function
,
2004,
Cell.
[45]
T. Du,et al.
Asymmetry in the Assembly of the RNAi Enzyme Complex
,
2003,
Cell.
[46]
S. Jayasena,et al.
Functional siRNAs and miRNAs Exhibit Strand Bias
,
2003,
Cell.
[47]
V. Kim,et al.
The nuclear RNase III Drosha initiates microRNA processing
,
2003,
Nature.
[48]
V. Ambros,et al.
Temporal regulation of microRNA expression in Drosophila melanogaster mediated by hormonal signals and broad-Complex gene activity.
,
2003,
Developmental biology.
[49]
Ivo L. Hofacker,et al.
Vienna RNA secondary structure server
,
2003,
Nucleic Acids Res..
[50]
R. Russell,et al.
bantam Encodes a Developmentally Regulated microRNA that Controls Cell Proliferation and Regulates the Proapoptotic Gene hid in Drosophila
,
2003,
Cell.
[51]
W. L'amoreaux,et al.
Morphological evidence that salivary gland degeneration in the American dog tick, Dermacentor variabilis (Say), involves programmed cell death.
,
2003,
Tissue & cell.
[52]
V. Kim,et al.
MicroRNA maturation: stepwise processing and subcellular localization
,
2002,
The EMBO journal.
[53]
W. J. Kent,et al.
BLAT--the BLAST-like alignment tool.
,
2002,
Genome research.
[54]
S. Bortoluzzi,et al.
Detecting differentially expressed genes in multiple tag sampling experiments: comparative evaluation of statistical tests.
,
2001,
Human molecular genetics.
[55]
B. Reinhart,et al.
The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans
,
2000,
Nature.
[56]
L. Figueiredo,et al.
Report on ticks collected in the Southeast and Mid-West regions of Brazil: analyzing the potential transmission of tick-borne pathogens to man.
,
1999,
Revista da Sociedade Brasileira de Medicina Tropical.
[57]
W. Haas,et al.
Host-odour recognition in two tick species is coded in a blend of vertebrate volatiles
,
1999,
Journal of Comparative Physiology A.
[58]
D. Botstein,et al.
Cluster analysis and display of genome-wide expression patterns.
,
1998,
Proceedings of the National Academy of Sciences of the United States of America.
[59]
M. Nei,et al.
A new method of inference of ancestral nucleotide and amino acid sequences.
,
1995,
Genetics.
[60]
R. Poorman,et al.
A Heme-binding Protein from Hemolymph and Oocytes of the Blood-sucking Insect, Rhodnius prolixus
,
1995,
The Journal of Biological Chemistry.
[61]
H. Inokuma,et al.
Prostaglandin E2 production by the cattle tick (Boophilus microplus) into feeding sites and its effect on the response of bovine mononuclear cells to mitogen.
,
1994,
Veterinary parasitology.
[62]
T. Kaufman,et al.
The homeotic gene Sex combs reduced of Drosophila melanogaster is differentially regulated in the embryonic and imaginal stages of development.
,
1991,
Genetics.
[63]
N. Stewart,et al.
Biological comparisons between a laboratory-maintained and a recently isolated field strain of Boophilus microplus.
,
1982,
The Journal of parasitology.
[64]
S. Jeffery.
Evolution of Protein Molecules
,
1979
.
[65]
T. Jukes.
CHAPTER 24 – Evolution of Protein Molecules
,
1969
.