Maxwell parallel imaging

Purpose: To develop a general framework for Parallel Imaging (PI) with the use of Maxwell regularization for the estimation of the sensitivity maps (SMs) and constrained optimization for the parameter-free image reconstruction. Theory and Methods: Certain characteristics of both the SMs and the images are routinely used to regularize the otherwise ill-posed optimization-based joint reconstruction from highly accelerated PI data. In this paper we rely on a fundamental property of SMs--they are solutions of Maxwell equations-- we construct the subspace of all possible SM distributions supported in a given field-of-view, and we promote solutions of SMs that belong in this subspace. In addition, we propose a constrained optimization scheme for the image reconstruction, as a second step, once an accurate estimation of the SMs is available. The resulting method, dubbed Maxwell Parallel Imaging (MPI), works seamlessly for arbitrary sequences (both 2D and 3D) with any trajectory and minimal calibration signals. Results: The effectiveness of MPI is illustrated for a wide range of datasets with various undersampling schemes, including radial, variable-density Poisson-disc, and Cartesian, and is compared against the state-of-the-art PI methods. Finally, we include some numerical experiments that demonstrate the memory footprint reduction of the constructed Maxwell basis with the help of tensor decomposition, thus allowing the use of MPI for full 3D image reconstructions. Conclusions: The MPI framework provides a physics-inspired optimization method for the accurate and efficient image reconstruction from arbitrary accelerated scans.

[1]  Michael Elad,et al.  ESPIRiT—an eigenvalue approach to autocalibrating parallel MRI: Where SENSE meets GRAPPA , 2014, Magnetic resonance in medicine.

[2]  Michael Unser,et al.  Hessian Schatten-Norm Regularization for Linear Inverse Problems , 2012, IEEE Transactions on Image Processing.

[3]  Steen Moeller,et al.  Deep-Learning Methods for Parallel Magnetic Resonance Imaging Reconstruction: A Survey of the Current Approaches, Trends, and Issues , 2020, IEEE Signal Processing Magazine.

[4]  Jianhong Shen,et al.  Deblurring images: Matrices, spectra, and filtering , 2007, Math. Comput..

[5]  Frédo Durand,et al.  Understanding Blind Deconvolution Algorithms , 2011, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[6]  Leslie Ying,et al.  Joint image reconstruction and sensitivity estimation in SENSE (JSENSE) , 2007, Magnetic resonance in medicine.

[7]  Michael Elad,et al.  Calibrationless parallel imaging reconstruction based on structured low‐rank matrix completion , 2013, Magnetic resonance in medicine.

[8]  Stamatios Lefkimmiatis,et al.  Iterative Joint Image Demosaicking and Denoising Using a Residual Denoising Network , 2018, IEEE Transactions on Image Processing.

[9]  Jingwei Zhuo,et al.  P‐LORAKS: Low‐rank modeling of local k‐space neighborhoods with parallel imaging data , 2016, Magnetic resonance in medicine.

[10]  Wei Lin,et al.  A rapid and robust numerical algorithm for sensitivity encoding with sparsity constraints: Self‐feeding sparse SENSE , 2010, Magnetic resonance in medicine.

[11]  Nathan Halko,et al.  Finding Structure with Randomness: Probabilistic Algorithms for Constructing Approximate Matrix Decompositions , 2009, SIAM Rev..

[12]  T. Hohage,et al.  Image reconstruction by regularized nonlinear inversion—Joint estimation of coil sensitivities and image content , 2008, Magnetic resonance in medicine.

[13]  Daniel K Sodickson,et al.  Dependence of B1+ and B1- Field Patterns of Surface Coils on the Electrical Properties of the Sample and the MR Operating Frequency. , 2016, Concepts in magnetic resonance. Part B, Magnetic resonance engineering.

[14]  Stanley Osher,et al.  Nonlocal Structure Tensor Functionals for Image Regularization , 2015, IEEE Transactions on Computational Imaging.

[15]  Akira Ishimaru,et al.  Wave propagation and scattering in random media , 1997 .

[16]  Jong Chul Ye,et al.  Deep artifact learning for compressed sensing and parallel MRI , 2017, ArXiv.

[17]  Armando Manduca,et al.  Calibrationless parallel MRI using CLEAR , 2011, 2011 Conference Record of the Forty Fifth Asilomar Conference on Signals, Systems and Computers (ASILOMAR).

[18]  Athanasios G. Polimeridis,et al.  Memory Footprint Reduction for the FFT-Based Volume Integral Equation Method via Tensor Decompositions , 2018, IEEE Transactions on Antennas and Propagation.

[19]  Ernie Esser,et al.  Applications of Lagrangian-Based Alternating Direction Methods and Connections to Split Bregman , 2009 .

[20]  Robin M Heidemann,et al.  Generalized autocalibrating partially parallel acquisitions (GRAPPA) , 2002, Magnetic resonance in medicine.

[21]  Michael Lustig,et al.  Estimating absolute‐phase maps using ESPIRiT and virtual conjugate coils , 2015, Magnetic resonance in medicine.

[22]  Frank Ong,et al.  ENLIVE: An Efficient Nonlinear Method for Calibrationless and Robust Parallel Imaging , 2017, Scientific Reports.

[23]  Per-Gunnar Martinsson,et al.  Randomized algorithms for the low-rank approximation of matrices , 2007, Proceedings of the National Academy of Sciences.

[24]  L. Rudin,et al.  Nonlinear total variation based noise removal algorithms , 1992 .

[25]  Stuart Crozier,et al.  An electromagnetic reverse method of coil sensitivity mapping for parallel MRI - theoretical framework. , 2010, Journal of magnetic resonance.

[26]  Jacob K. White,et al.  Fast Electromagnetic Analysis of MRI Transmit RF Coils Based on Accelerated Integral Equation Methods , 2016, IEEE Transactions on Biomedical Engineering.

[27]  Dianne P. O'Leary,et al.  Deblurring Images: Matrices, Spectra and Filtering , 2006, J. Electronic Imaging.

[28]  Jacob K. White,et al.  The ultimate signal‐to‐noise ratio in realistic body models , 2017, Magnetic resonance in medicine.

[29]  Stephen P. Boyd,et al.  Distributed Optimization and Statistical Learning via the Alternating Direction Method of Multipliers , 2011, Found. Trends Mach. Learn..

[30]  Stephan Günnemann,et al.  Introduction to Tensor Decompositions and their Applications in Machine Learning , 2017, ArXiv.

[31]  Patrick L. Combettes,et al.  Signal Recovery by Proximal Forward-Backward Splitting , 2005, Multiscale Model. Simul..

[32]  Michael Rabbat,et al.  fastMRI: A Publicly Available Raw k-Space and DICOM Dataset of Knee Images for Accelerated MR Image Reconstruction Using Machine Learning. , 2020, Radiology. Artificial intelligence.

[33]  Pascal Vincent,et al.  fastMRI: An Open Dataset and Benchmarks for Accelerated MRI , 2018, ArXiv.

[34]  Jia-Hong Gao,et al.  Improved SENSE imaging using accurate coil sensitivity maps generated by a global magnitude‐phase fitting method , 2015, Magnetic resonance in medicine.

[35]  Jacob K. White,et al.  Computation of ultimate SAR amplification factors for radiofrequency hyperthermia in non-uniform body models: impact of frequency and tumour location , 2018, International journal of hyperthermia : the official journal of European Society for Hyperthermic Oncology, North American Hyperthermia Group.

[36]  Tony F. Chan,et al.  Color TV: total variation methods for restoration of vector-valued images , 1998, IEEE Trans. Image Process..

[37]  D. Donoho,et al.  Sparse MRI: The application of compressed sensing for rapid MR imaging , 2007, Magnetic resonance in medicine.

[38]  Ioannis P. Georgakis,et al.  A formalism to investigate the optimal transmit efficiency in radiofrequency shimming , 2020, NMR in biomedicine.

[39]  P. Boesiger,et al.  SENSE: Sensitivity encoding for fast MRI , 1999, Magnetic resonance in medicine.

[40]  K. Bredies,et al.  Parallel imaging with nonlinear reconstruction using variational penalties , 2012, Magnetic resonance in medicine.

[41]  Stamatios Lefkimmiatis,et al.  Iterative Residual CNNs for Burst Photography Applications , 2018, 2019 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR).

[42]  Jacob K. White,et al.  Stable FFT-JVIE solvers for fast analysis of highly inhomogeneous dielectric objects , 2014, J. Comput. Phys..

[43]  H. Macdonald,et al.  The Integration of the Equations of Propagation of Electric Waves , 1912 .

[44]  Justin P. Haldar,et al.  Low-Rank Modeling of Local $k$-Space Neighborhoods (LORAKS) for Constrained MRI , 2014, IEEE Transactions on Medical Imaging.

[45]  Michael Unser,et al.  Poisson Image Reconstruction With Hessian Schatten-Norm Regularization , 2013, IEEE Transactions on Image Processing.

[46]  Petros Maragos,et al.  Structure Tensor Total Variation , 2015, SIAM J. Imaging Sci..

[47]  Gregory Shakhnarovich,et al.  Deep Back-Projection Networks for Super-Resolution , 2018, 2018 IEEE/CVF Conference on Computer Vision and Pattern Recognition.

[48]  A. Bakushinsky,et al.  Iterative Methods for Approximate Solution of Inverse Problems , 2005 .

[49]  L. Tucker,et al.  Some mathematical notes on three-mode factor analysis , 1966, Psychometrika.

[50]  Peter Börnert,et al.  Parallel magnetic resonance imaging , 2007, Neurotherapeutics.

[51]  J. Shewchuk An Introduction to the Conjugate Gradient Method Without the Agonizing Pain , 1994 .

[52]  Stamatios Lefkimmiatis,et al.  Universal Denoising Networks : A Novel CNN Architecture for Image Denoising , 2017, 2018 IEEE/CVF Conference on Computer Vision and Pattern Recognition.

[53]  A. Love,et al.  The Integration of the Equations of Propagation of Electric Waves , 2022 .

[54]  Stefan Roth,et al.  Shrinkage Fields for Effective Image Restoration , 2014, 2014 IEEE Conference on Computer Vision and Pattern Recognition.

[55]  Jeffrey A. Fessler,et al.  Regularized MR coil sensitivity estimation using augmented Lagrangian methods , 2012, 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI).

[56]  B. He,et al.  Alternating Direction Method with Self-Adaptive Penalty Parameters for Monotone Variational Inequalities , 2000 .

[57]  Mathews Jacob,et al.  MULTICHANNEL ESTIMATION OF COIL SENSITIVITIES IN PARALLEL MRI , 2007, 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

[58]  Mário A. T. Figueiredo,et al.  Signal restoration with overcomplete wavelet transforms: comparison of analysis and synthesis priors , 2009, Optical Engineering + Applications.