Laboratory mice born to wild mice have natural microbiota and model human immune responses
暂无分享,去创建一个
J. Badger | M. Hafner | J. McCulloch | Y. Belkaid | G. Trinchieri | S. Sen | Jasmin Herz | D. Anastasakis | S. Rosshart | Brian G. Vassallo | Ashli Hunter | Morgan K. Wall | A. Sarshad | Irina Leonardi | Nicholas Collins | J. Blatter | Seong-Ji Han | Samira Tamoutounour | Svetlana Potapova | Mark B. Foster St. Claire | W. Yuan | Matthew S Dreier | B. Hild | David Wang | I. Iliev | B. Rehermann | J. Herz | M. S. Dreier | Wuxing Yuan
[1] S. Givan,et al. The influence of caging, bedding, and diet on the composition of the microbiota in different regions of the mouse gut , 2018, Scientific Reports.
[2] P. Loke,et al. Rapid environmental effects on gut nematode susceptibility in rewilded mice , 2018, PLoS biology.
[3] Jesse H. Arbuckle,et al. Non-classical Immunity Controls Microbiota Impact on Skin Immunity and Tissue Repair , 2018, Cell.
[4] D. McGovern,et al. CX3CR1+ mononuclear phagocytes control immunity to intestinal fungi , 2018, Science.
[5] Allyson L. Byrd,et al. White Adipose Tissue Is a Reservoir for Memory T Cells and Promotes Protective Memory Responses to Infection , 2017, Immunity.
[6] G. A. Lazar,et al. Next generation antibody drugs: pursuit of the 'high-hanging fruit' , 2017, Nature Reviews Drug Discovery.
[7] N. Ajami,et al. Wild Mouse Gut Microbiota Promotes Host Fitness and Improves Disease Resistance , 2017, Cell.
[8] Irina Leonardi,et al. Fungal dysbiosis: immunity and interactions at mucosal barriers , 2017, Nature Reviews Immunology.
[9] B. Becher,et al. CyTOF workflow: differential discovery in high-throughput high-dimensional cytometry datasets , 2017, F1000Research.
[10] J. Raynes,et al. The comparative immunology of wild and laboratory mice, Mus musculus domesticus , 2017, Nature Communications.
[11] Guoyan Zhao,et al. VirusSeeker, a computational pipeline for virus discovery and virome composition analysis. , 2017, Virology.
[12] D. Underhill,et al. The mycobiome of the human urinary tract: potential roles for fungi in urology. , 2017, Annals of translational medicine.
[13] Andreas Radbruch,et al. Wild immunology assessed by multidimensional mass cytometry , 2017, Cytometry. Part A : the journal of the International Society for Analytical Cytology.
[14] David Wang,et al. The Bacterial Microbiome and Virome Milestones of Infant Development. , 2016, Trends in microbiology.
[15] Roland Eils,et al. Complex heatmaps reveal patterns and correlations in multidimensional genomic data , 2016, Bioinform..
[16] K. Servick. Of mice and microbes. , 2016, Science.
[17] H. Virgin,et al. Accounting for reciprocal host–microbiome interactions in experimental science , 2016, Nature.
[18] M. Low,et al. Not all mice are the same: Standardization of animal research data presentation , 2016, Hepatology.
[19] Matheus C. Bürger,et al. Sequential Infection with Common Pathogens Promotes Human-like Immune Gene Expression and Altered Vaccine Response. , 2016, Cell host & microbe.
[20] Paul J. McMurdie,et al. DADA2: High resolution sample inference from Illumina amplicon data , 2016, Nature Methods.
[21] W. Haining,et al. Normalizing the environment recapitulates adult human immune traits in laboratory mice , 2016, Nature.
[22] H. Virgin,et al. SIV Infection-Mediated Changes in Gastrointestinal Bacterial Microbiome and Virome Are Associated with Immunodeficiency and Prevented by Vaccination. , 2016, Cell host & microbe.
[23] Julie K. Pfeiffer,et al. Transkingdom control of viral infection and immunity in the mammalian intestine , 2016, Science.
[24] Sean C. Bendall,et al. Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis , 2015, Cell.
[25] D. Underhill,et al. Mycobiome: Approaches to analysis of intestinal fungi. , 2015, Journal of immunological methods.
[26] K. McCoy,et al. Standardised animal models of host microbial mutualism , 2014, Mucosal Immunology.
[27] W. Huber,et al. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 , 2014, Genome Biology.
[28] Brandi L. Cantarel,et al. Bacteria from Diverse Habitats Colonize and Compete in the Mouse Gut , 2014, Cell.
[29] O. Stine,et al. Geographic variation in the eukaryotic virome of human diarrhea , 2014, Virology.
[30] Kunihiko Sadakane,et al. MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph , 2014, Bioinform..
[31] Torsten Seemann,et al. Prokka: rapid prokaryotic genome annotation , 2014, Bioinform..
[32] D. Underhill,et al. The mycobiota: interactions between commensal fungi and the host immune system , 2014, Nature Reviews Immunology.
[33] Jeffrey A. Wiser,et al. ImmPort: disseminating data to the public for the future of immunology , 2014, Immunologic Research.
[34] Björn Usadel,et al. Trimmomatic: a flexible trimmer for Illumina sequence data , 2014, Bioinform..
[35] Herbert W Virgin,et al. The Virome in Mammalian Physiology and Disease , 2014, Cell.
[36] Y. Belkaid,et al. Role of the Microbiota in Immunity and Inflammation , 2014, Cell.
[37] Derrick E. Wood,et al. Kraken: ultrafast metagenomic sequence classification using exact alignments , 2014, Genome Biology.
[38] H. Virgin,et al. Kingdom-Agnostic Metagenomics and the Importance of Complete Characterization of Enteric Microbial Communities , 2014, Gastroenterology.
[39] M. Ghert,et al. Lost in translation: animal models and clinical trials in cancer treatment. , 2014, American journal of translational research.
[40] Michael Hay,et al. Clinical development success rates for investigational drugs , 2014, Nature Biotechnology.
[41] J. Clemente,et al. Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice , 2013, Science.
[42] Sean C. Bendall,et al. Normalization of mass cytometry data with bead standards , 2013, Cytometry. Part A : the journal of the International Society for Analytical Cytology.
[43] Susan Holmes,et al. phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data , 2013, PloS one.
[44] T. Miyakawa,et al. Genomic responses in mouse models poorly mimic human inflammatory diseases , 2013 .
[45] D. Koller,et al. Conservation and divergence in the transcriptional programs of the human and mouse immune systems , 2013, Proceedings of the National Academy of Sciences.
[46] David G Hendrickson,et al. Differential analysis of gene regulation at transcript resolution with RNA-seq , 2012, Nature Biotechnology.
[47] David A. Relman,et al. Gut Immune Maturation Depends on Colonization with a Host-Specific Microbiota , 2012, Cell.
[48] A. Macpherson,et al. Interactions Between the Microbiota and the Immune System , 2012, Science.
[49] Steven L Salzberg,et al. Fast gapped-read alignment with Bowtie 2 , 2012, Nature Methods.
[50] David R. Kelley,et al. Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks , 2012, Nature Protocols.
[51] Dan R. Littman,et al. Induction of Intestinal Th17 Cells by Segmented Filamentous Bacteria , 2009, Cell.
[52] M. Singer,et al. Animal models of sepsis: Why does preclinical efficacy fail to translate to the clinical setting? , 2009, Critical care medicine.
[53] Phillip I. Tarr,et al. Metagenomic Analysis of Human Diarrhea: Viral Detection and Discovery , 2008, PLoS pathogens.
[54] G. Crooks,et al. Immune-cell lineage commitment: translation from mice to humans. , 2007, Immunity.
[55] Nicki Panoskaltsis,et al. Cytokine storm in a phase 1 trial of the anti-CD28 monoclonal antibody TGN1412. , 2006, The New England journal of medicine.
[56] M. V. von Herrath,et al. Lost in translation , 2005, The Journal of experimental medicine.
[57] T. Hünig,et al. CD28 superagonists: mode of action and therapeutic potential. , 2005, Immunology letters.
[58] C. Hughes,et al. Of Mice and Not Men: Differences between Mouse and Human Immunology , 2004, The Journal of Immunology.
[59] Marti J. Anderson,et al. A new method for non-parametric multivariate analysis of variance in ecology , 2001 .
[60] T. Hanke,et al. CD28‐mediated induction of proliferation in resting T cells in vitro and in vivo without engagement of the T cell receptor: Evidence for functionally distinct forms of CD28 , 1997, European journal of immunology.
[61] S. Opal,et al. Treatment of septic shock with the tumor necrosis factor receptor:Fc fusion protein. The Soluble TNF Receptor Sepsis Study Group. , 1996, The New England journal of medicine.
[62] E. Myers,et al. Basic local alignment search tool. , 1990, Journal of molecular biology.
[63] B. Beutler,et al. Passive immunization against cachectin/tumor necrosis factor protects mice from lethal effect of endotoxin. , 1985, Science.
[64] J. Gower. Some distance properties of latent root and vector methods used in multivariate analysis , 1966 .
[65] D. Michie,et al. Studies on the Transfer of Fertilized Mouse Eggs to Uterine Foster-Mothers: I. Factors Affecting the Implantation and Survival of Native and Transferred Eggs , 1956 .
[66] David W Threadgill,et al. The collaborative cross: a recombinant inbred mouse population for the systems genetic era. , 2011, ILAR journal.
[67] P. Legendre,et al. vegan : Community Ecology Package. R package version 1.8-5 , 2007 .