Adaptive common average reference for in vivo multichannel local field potentials

For in vivo neural recording, local field potential (LFP) is often corrupted by spatially correlated artifacts, especially in awake/behaving subjects. A method named adaptive common average reference (ACAR) based on the concept of adaptive noise canceling (ANC) that utilizes the correlative features of common noise sources and implements with common average referencing (CAR), was proposed for removing the spatially correlated artifacts. Moreover, a correlation analysis was devised to automatically select appropriate channels before generating the CAR reference. The performance was evaluated in both synthesized data and real data from the hippocampus of pigeons, and the results were compared with the standard CAR and several previously proposed artifacts removal methods. Comparative testing results suggest that the ACAR performs better than the available algorithms, especially in a low SNR. In addition, feasibility of this method was provided theoretically. The proposed method would be an important pre-processing step for in vivo LFP processing.

[1]  Seán F. McLoone,et al.  The Use of Ensemble Empirical Mode Decomposition With Canonical Correlation Analysis as a Novel Artifact Removal Technique , 2013, IEEE Transactions on Biomedical Engineering.

[2]  Tomás Ward,et al.  Artifact Removal in Physiological Signals—Practices and Possibilities , 2012, IEEE Transactions on Information Technology in Biomedicine.

[3]  Wei Wang,et al.  Automated Filtering of Common-Mode Artifacts in Multichannel Physiological Recordings , 2013, IEEE Transactions on Biomedical Engineering.

[4]  Eun Jung Hwang,et al.  The utility of multichannel local field potentials for brain–machine interfaces , 2013, Journal of neural engineering.

[5]  Zhigang Shang,et al.  Automatic extracellular spike denoising using wavelet neighbor coefficients and level dependency , 2015, Neurocomputing.

[6]  Kunal J. Paralikar,et al.  New approaches to eliminating common-noise artifacts in recordings from intracortical microelectrode arrays: Inter-electrode correlation and virtual referencing , 2009, Journal of Neuroscience Methods.

[7]  P. König,et al.  A Functional Gamma-Band Defined by Stimulus-Dependent Synchronization in Area 18 of Awake Behaving Cats , 2003, The Journal of Neuroscience.

[8]  Shih-Chieh Lin,et al.  Unmasking local activity within local field potentials (LFPs) by removing distal electrical signals using independent component analysis , 2016, NeuroImage.

[9]  G. U. Ebuh,et al.  Modified Wilcoxon Signed-Rank Test , 2012 .

[10]  B. Widrow,et al.  Adaptive noise cancelling: Principles and applications , 1975 .

[11]  Arthur Gretton,et al.  Low-Frequency Local Field Potentials and Spikes in Primary Visual Cortex Convey Independent Visual Information , 2008, The Journal of Neuroscience.

[12]  Anna W. Roe,et al.  Trial-to-trial noise cancellation of cortical field potentials in awake macaques by autoregression model with exogenous input (ARX) , 2011, Journal of Neuroscience Methods.

[13]  Dario Farina,et al.  Adaptive common average filtering for myocontrol applications , 2014, Medical & Biological Engineering & Computing.

[14]  N. Logothetis,et al.  The Amplitude and Timing of the BOLD Signal Reflects the Relationship between Local Field Potential Power at Different Frequencies , 2012, The Journal of Neuroscience.

[15]  Stefano Panzeri,et al.  Optimal band separation of extracellular field potentials , 2012, Journal of Neuroscience Methods.

[16]  Amir Rastegarnia,et al.  Artifact characterization and removal for in vivo neural recording , 2014, Journal of Neuroscience Methods.

[17]  R. Andersen,et al.  Cortical Local Field Potential Encodes Movement Intentions in the Posterior Parietal Cortex , 2005, Neuron.

[18]  Stefano Panzeri,et al.  Sensory information in local field potentials and spikes from visual and auditory cortices: time scales and frequency bands , 2010, Journal of Computational Neuroscience.

[19]  Hujun Yin,et al.  Information Quantification of Empirical Mode Decomposition and Applications to Field Potentials , 2011, Int. J. Neural Syst..

[20]  Kip A Ludwig,et al.  Using a common average reference to improve cortical neuron recordings from microelectrode arrays. , 2009, Journal of neurophysiology.