S-MART, A Software Toolbox to Aid RNA-seq Data Analysis
暂无分享,去创建一个
[1] N. Rajewsky,et al. Discovering microRNAs from deep sequencing data using miRDeep , 2008, Nature Biotechnology.
[2] S. Lewis,et al. The generic genome browser: a building block for a model organism system database. , 2002, Genome research.
[3] Manolis Kellis,et al. Discrete Small RNA-Generating Loci as Master Regulators of Transposon Activity in Drosophila , 2007, Cell.
[4] Tom H. Pringle,et al. The human genome browser at UCSC. , 2002, Genome research.
[5] Siu-Ming Yiu,et al. SOAP2: an improved ultrafast tool for short read alignment , 2009, Bioinform..
[6] Cole Trapnell,et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome , 2009, Genome Biology.
[7] Sandrine Dudoit,et al. Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments , 2010, BMC Bioinformatics.
[8]
R. Durbin,et al.
Mapping Quality Scores Mapping Short Dna Sequencing Reads and Calling Variants Using P ,
2022
.
[9]
M. Gerstein,et al.
The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing
,
2008,
Science.
[10]
Richard Durbin,et al.
Sequence analysis Fast and accurate short read alignment with Burrows – Wheeler transform
,
2009
.
[11]
Richard Durbin,et al.
Fast and accurate long-read alignment with Burrows–Wheeler transform
,
2010,
Bioinform..
[12]
A. Oshlack,et al.
Transcript length bias in RNA-seq data confounds systems biology
,
2009,
Biology Direct.
[13]
Daniel J. Blankenberg,et al.
A framework for collaborative analysis of ENCODE data: making large-scale analyses biologist-friendly.
,
2007,
Genome research.