Multifaceted mammalian transcriptome.
暂无分享,去创建一个
[1] S. Salzberg,et al. The Transcriptional Landscape of the Mammalian Genome , 2005, Science.
[2] John N. Hutchinson,et al. Widespread Monoallelic Expression on Human Autosomes , 2007, Science.
[3] G. Tolstonog,et al. Distinct roles for LINE-1 and HERV-K retroelements in cell proliferation, differentiation and tumor progression , 2007, Oncogene.
[4] M. Krangel,et al. Regulation of T cell receptor-alpha gene recombination by transcription. , 2006, Nature immunology.
[5] Ana Serra Barros,et al. Repression of the human dihydrofolate reductase gene by a non-coding interfering transcript , 2007, Nature.
[6] C. Kai,et al. CAGE: cap analysis of gene expression , 2006, Nature Methods.
[7] T. Kwok,et al. Induction of drug resistance and transformation in human cancer cells by the noncoding RNA CUDR. , 2007, RNA.
[8] M. Krangel,et al. Noncoding transcription controls downstream promoters to regulate T‐cell receptor α recombination , 2007, The EMBO journal.
[9] A. Evsikov,et al. Retrotransposons regulate host genes in mouse oocytes and preimplantation embryos. , 2004, Developmental cell.
[10] Gratien G. Prefontaine,et al. Developmentally Regulated Activation of a SINE B2 Repeat as a Domain Boundary in Organogenesis , 2007, Science.
[11] J. Mattick. Challenging the dogma: the hidden layer of non-protein-coding RNAs in complex organisms. , 2003, BioEssays : news and reviews in molecular, cellular and developmental biology.
[12] William Stafford Noble,et al. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project , 2007, Nature.
[13] Ravi Sachidanandam,et al. Developmentally Regulated piRNA Clusters Implicate MILI in Transposon Control , 2007, Science.
[14] R. Weiss,et al. EGO, a novel, noncoding RNA gene, regulates eosinophil granule protein transcript expression. , 2007, Blood.
[15] J. Mattick,et al. Rapid evolution of noncoding RNAs: lack of conservation does not mean lack of function. , 2006, Trends in genetics : TIG.
[16] H. Chao,et al. Natural Antisense mRNAs to Hyaluronan Synthase 2 Inhibit Hyaluronan Biosynthesis and Cell Proliferation* , 2005, Journal of Biological Chemistry.
[17] D. Haussler,et al. An RNA gene expressed during cortical development evolved rapidly in humans , 2006, Nature.
[18] G. Hannon,et al. The Piwi-piRNA Pathway Provides an Adaptive Defense in the Transposon Arms Race , 2007, Science.
[19] S. Batalov,et al. Antisense Transcription in the Mammalian Transcriptome , 2005, Science.
[20] D. Corey,et al. Activating gene expression in mammalian cells with promoter-targeted duplex RNAs. , 2007, Nature chemical biology.
[21] V. Kim. MicroRNA biogenesis: coordinated cropping and dicing , 2005, Nature Reviews Molecular Cell Biology.
[22] Piero Carninci,et al. Tagging mammalian transcription complexity. , 2006, Trends in genetics : TIG.
[23] M. Karin,et al. A large noncoding RNA is a marker for murine hepatocellular carcinomas and a spectrum of human carcinomas , 2007, Oncogene.
[24] G. Helt,et al. Transcriptional Maps of 10 Human Chromosomes at 5-Nucleotide Resolution , 2005, Science.
[25] B. Cullen,et al. The imprinted H19 noncoding RNA is a primary microRNA precursor. , 2007, RNA.
[26] M. Oshimura,et al. Suggestive evidence for chromosomal localization of non-coding RNA from imprinted LIT1 , 2007, Journal of Human Genetics.
[27] P. Stadler,et al. RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription , 2007, Science.
[28] Edwin Cuppen,et al. Diversity of microRNAs in human and chimpanzee brain , 2006, Nature Genetics.
[29] V. Orlando,et al. Noncoding RNA synthesis and loss of Polycomb group repression accompanies the colinear activation of the human HOXA cluster. , 2006, RNA.
[30] I. Grummt,et al. Intergenic transcripts regulate the epigenetic state of rRNA genes. , 2006, Molecules and Cells.
[31] D. Haussecker,et al. Dicer-Dependent Turnover of Intergenic Transcripts from the Human β-Globin Gene Cluster , 2005, Molecular and Cellular Biology.
[32] N. Proudfoot. Transcriptional interference and termination between duplicated α-globin gene constructs suggests a novel mechanism for gene regulation , 1986, Nature.
[33] V. Babich,et al. Clusters of regulatory signals for RNA polymerase II transcription associated with Alu family repeats and CpG islands in human promoters. , 2004, Genomics.
[34] P. D. de Jong,et al. L1 retrotransposition can occur early in human embryonic development. , 2007, Human molecular genetics.
[35] D. Corey,et al. Inhibiting gene expression at transcription start sites in chromosomal DNA with antigene RNAs , 2005, Nature chemical biology.
[36] A. Hochberg,et al. The H19 Non-Coding RNA Is Essential for Human Tumor Growth , 2007, PloS one.
[37] David Haussler,et al. Thousands of human mobile element fragments undergo strong purifying selection near developmental genes , 2007, Proceedings of the National Academy of Sciences.
[38] Atif Shahab,et al. Fusion transcripts and transcribed retrotransposed loci discovered through comprehensive transcriptome analysis using Paired-End diTags (PETs). , 2007, Genome research.
[39] C. Sander,et al. A novel class of small RNAs bind to MILI protein in mouse testes , 2006, Nature.
[40] C. Ponting,et al. Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs. , 2007, Genome research.
[41] K. Shearwin,et al. Transcriptional interference--a crash course. , 2005, Trends in genetics : TIG.
[42] Howard Y. Chang,et al. Functional Demarcation of Active and Silent Chromatin Domains in Human HOX Loci by Noncoding RNAs , 2007, Cell.
[43] A. Feinberg,et al. Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA , 2008, Nature.
[44] Claes Wahlestedt,et al. RNA interference is not involved in natural antisense mediated regulation of gene expression in mammals , 2006, Genome Biology.
[45] F. Pauler,et al. Silencing by imprinted noncoding RNAs: is transcription the answer? , 2007, Trends in genetics : TIG.
[46] S. Antonarakis,et al. Transcriptional activation by bidirectional RNA polymerase II elongation over a silent promoter , 2005, EMBO reports.
[47] David I. Smith,et al. Long, abundantly expressed non-coding transcripts are altered in cancer. , 2008, Human molecular genetics.
[48] Martin S. Taylor,et al. Genome-wide analysis of mammalian promoter architecture and evolution , 2006, Nature Genetics.
[49] G. Finocchiaro,et al. Localizing hotspots of antisense transcription , 2007, Nucleic acids research.
[50] J. D. Engel,et al. Transcriptional interference among the murine ß-like globin genes , 2007 .
[51] C. Kanduri,et al. The length of the transcript encoded from the Kcnq1ot1 antisense promoter determines the degree of silencing , 2006, The EMBO journal.
[52] Brian S. Clark,et al. The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator. , 2006, Genes & development.
[53] Michael Thomas,et al. MALAT-1, a novel noncoding RNA, and thymosin β4 predict metastasis and survival in early-stage non-small cell lung cancer , 2003, Oncogene.
[54] N. Yang,et al. L1 retrotransposition is suppressed by endogenously encoded small interfering RNAs in human cultured cells , 2006, Nature Structural &Molecular Biology.
[55] J. D. Engel,et al. Transcriptional interference among the murine beta-like globin genes. , 2007, Blood.
[56] J. Takeda,et al. Retrotransposons Influence the Mouse Transcriptome: Implication for the Divergence of Genetic Traits , 2007, Genetics.
[57] J. Ortonne,et al. Transposable B2 SINE elements can provide mobile RNA polymerase II promoters , 2001, Nature Genetics.
[58] Ravi Sachidanandam,et al. A germline-specific class of small RNAs binds mammalian Piwi proteins , 2006, Nature.
[59] Piero Carninci,et al. Tag-based approaches for transcriptome research and genome annotation , 2005, Nature Methods.
[60] J. Goodrich,et al. The SINE-encoded mouse B2 RNA represses mRNA transcription in response to heat shock , 2004, Nature Structural &Molecular Biology.