A Ratchet Mechanism of Transcription Elongation and Its Control
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Arkady Mustaev | Andrei E. Ruckenstein | Vitaly Epshtein | Evgeny Nudler | E. Nudler | R. Rafikov | A. Ruckenstein | V. Epshtein | Gil Bar-Nahum | A. Mustaev | Gil Bar-Nahum | Ruslan Rafikov
[1] William J. Rice,et al. Structure and Function of the Transcription Elongation Factor GreB Bound to Bacterial RNA Polymerase , 2003, Cell.
[2] O. Laptenko,et al. Transcript cleavage factors GreA and GreB act as transient catalytic components of RNA polymerase , 2003, The EMBO journal.
[3] M. Gottesman,et al. Escherichia coli NusG protein stimulates transcription elongation rates in vivo and in vitro , 1995, Journal of bacteriology.
[4] M. Chamberlin,et al. Amplification and isolation of Escherichia coli nusA protein and studies of its effects on in vitro RNA chain elongation. , 1984, Biochemistry.
[5] V. Markovtsov,et al. Swing-gate model of nucleotide entry into the RNA polymerase active center. , 2002, Molecular cell.
[6] Hilla Peretz,et al. Ju n 20 03 Schrödinger ’ s Cat : The rules of engagement , 2003 .
[7] K. Turksen,et al. Isolation and characterization , 2006 .
[8] E. Nudler. Transcription elongation: structural basis and mechanisms. , 1999, Journal of molecular biology.
[9] Shigeyuki Yokoyama,et al. Structural Basis for Substrate Selection by T7 RNA Polymerase , 2004, Cell.
[10] E. Nudler,et al. Isolation and Characterization of σ70-Retaining Transcription Elongation Complexes from Escherichia coli , 2001, Cell.
[11] V. Markovtsov,et al. Mapping of Catalytic Residues in the RNA Polymerase Active Center , 1996, Science.
[12] K. Yano,et al. DSIF, a novel transcription elongation factor that regulates RNA polymerase II processivity, is composed of human Spt4 and Spt5 homologs. , 1998, Genes & development.
[13] S. Darst,et al. A Structural Model of Transcription Elongation , 2000 .
[14] D. Erie,et al. Downstream DNA Sequence Effects on Transcription Elongation , 2003, Journal of Biological Chemistry.
[15] Yong Je Chung,et al. Structure of bacteriophage T7 RNA polymerase at 3.3 Å resolution , 1993 .
[16] Robert Landick,et al. The flap domain is required for pause RNA hairpin inhibition of catalysis by RNA polymerase and can modulate intrinsic termination. , 2003, Molecular cell.
[17] M. Chamberlin,et al. Basic mechanisms of transcript elongation and its regulation. , 1997, Annual review of biochemistry.
[18] E. Nudler,et al. Transcription termination and anti‐termination in E. coli , 2002, Genes to cells : devoted to molecular & cellular mechanisms.
[19] M. Kozlov,et al. Donation of catalytic residues to RNA polymerase active center by transcription factor Gre , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[20] Thomas A Steitz,et al. The Structural Mechanism of Translocation and Helicase Activity in T7 RNA Polymerase , 2004, Cell.
[21] D. Bushnell,et al. Structural Basis of Transcription Nucleotide Selection by Rotation in the RNA Polymerase II Active Center , 2004, Cell.
[22] E. Nudler,et al. Methods of walking with the RNA polymerase. , 2003, Methods in enzymology.
[23] E. Nudler,et al. The RNA–DNA Hybrid Maintains the Register of Transcription by Preventing Backtracking of RNA Polymerase , 1997, Cell.
[24] M. Kashlev,et al. RNA Polymerase Switches between Inactivated and Activated States By Translocating Back and Forth along the DNA and the RNA* , 1997, The Journal of Biological Chemistry.
[25] S. Yokoyama,et al. Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 Å resolution , 2002, Nature.
[26] E. Nudler,et al. Control of Intrinsic Transcription Termination by N and NusA The Basic Mechanisms , 2001, Cell.
[27] Evgeny Nudler,et al. Analysis of the intrinsic transcription termination mechanism and its control. , 2003, Methods in enzymology.
[28] P. Plateau,et al. Direct random mutagenesis of gene-sized DNA fragments using polymerase chain reaction. , 1995, Analytical biochemistry.
[29] J. Richardson. Transcription termination. , 1993, Critical reviews in biochemistry and molecular biology.
[30] P. Cramer,et al. Structural Basis of Transcription: An RNA Polymerase II Elongation Complex at 3.3 Å Resolution , 2001, Science.
[31] A. Das,et al. Intrinsic transcript cleavage activity of RNA polymerase. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[32] Hiroshi Handa,et al. NTP-driven Translocation by Human RNA Polymerase II* , 2003, The Journal of Biological Chemistry.
[33] P. V. Hippel,et al. An Integrated Model of the Transcription Complex in Elongation, Termination, and Editing , 1998 .
[34] R. Sousa,et al. A model for the mechanism of polymerase translocation. , 1997, Journal of molecular biology.
[35] C. Gross,et al. Determination of intrinsic transcription termination efficiency by RNA polymerase elongation rate. , 1994, Science.
[36] Elio A. Abbondanzieri,et al. Ubiquitous Transcriptional Pausing Is Independent of RNA Polymerase Backtracking , 2003, Cell.
[37] K. Severinov,et al. Mutations in and Monoclonal Antibody Binding to Evolutionary Hypervariable Region of Escherichia coli RNA Polymerase β′ Subunit Inhibit Transcript Cleavage and Transcript Elongation* , 1998, The Journal of Biological Chemistry.
[38] Jeffrey W. Roberts,et al. Antitermination by bacteriophage lambda Q protein. , 1998, Cold Spring Harbor symposia on quantitative biology.
[39] P. Cramer,et al. Architecture of the RNA Polymerase II-TFIIS Complex and Implications for mRNA Cleavage , 2003, Cell.
[40] R. Landick,et al. Pausing by bacterial RNA polymerase is mediated by mechanistically distinct classes of signals. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[41] R. Conaway,et al. Mechanism and regulation of transcriptional elongation by RNA polymerase II. , 1999, Current opinion in cell biology.
[42] K. Severinov,et al. Crystal Structure of Thermus aquaticus Core RNA Polymerase at 3.3 Å Resolution , 1999, Cell.
[43] V. Markovtsov,et al. Strategies and methods of cross-linking of RNA polymerase active center. , 2003, Methods in enzymology.
[44] R. Sousa. A new level of regulation in transcription elongation? , 2001, Trends in biochemical sciences.
[45] C. Condon,et al. Control of rRNA transcription in Escherichia coli. , 1995, Microbiological reviews.
[46] E. Nudler,et al. The mechanism of intrinsic transcription termination. , 1999, Molecular cell.
[47] R. Landick,et al. Allosteric Control of RNA Polymerase by a Site That Contacts Nascent RNA Hairpins , 2001, Science.
[48] P. Cramer,et al. Structural Basis of Transcription: RNA Polymerase II at 2.8 Ångstrom Resolution , 2001, Science.
[49] K. Jensen,et al. Effects of guanosine 3',5'-bisdiphosphate (ppGpp) on rate of transcription elongation in isoleucine-starved Escherichia coli. , 1994, The Journal of biological chemistry.
[50] D. Erie,et al. Allosteric Binding of Nucleoside Triphosphates to RNA Polymerase Regulates Transcription Elongation , 2001, Cell.