The Hologenome Concept: Human, Animal and Plant Microbiota

[1]  G. Williams Adaptation and Natural Selection , 2018 .

[2]  Bharti Choudhary,et al.  Chitinases: in agriculture and human healthcare , 2014, Critical reviews in biotechnology.

[3]  Jerry D. Cohen,et al.  Auxin producing non‐heterocystous Cyanobacteria and their impact on the growth and endogenous auxin homeostasis of wheat , 2013, Journal of basic microbiology.

[4]  J. Gordon,et al.  Gnotobiotic mouse model of phage–bacterial host dynamics in the human gut , 2013, Proceedings of the National Academy of Sciences.

[5]  C. Chassard,et al.  Assessment of bacterial diversity in breast milk using culture-dependent and culture-independent approaches. , 2013, The British journal of nutrition.

[6]  Cheng-gong Yu,et al.  Recent progress on the role of gut microbiota in the pathogenesis of inflammatory bowel disease , 2013, Journal of digestive diseases.

[7]  J. Serôdio,et al.  Crawling leaves: photosynthesis in sacoglossan sea slugs. , 2013, Journal of experimental botany.

[8]  Michael A. Thomas,et al.  Ecology: Gene tweaking for conservation , 2013, Nature.

[9]  D. Laukens,et al.  A dried yeast fermentate selectively modulates both the luminal and mucosal gut microbiota and protects against inflammation, as studied in an integrated in vitro approach. , 2013, Journal of agricultural and food chemistry.

[10]  T. Bosch Cnidarian-microbe interactions and the origin of innate immunity in metazoans. , 2013, Annual review of microbiology.

[11]  Elizabeth A. Hussa,et al.  It takes a village: ecological and fitness impacts of multipartite mutualism. , 2013, Annual review of microbiology.

[12]  T. Roeder,et al.  Noninvasive Analysis of Microbiome Dynamics in the Fruit Fly Drosophila melanogaster , 2013, Applied and Environmental Microbiology.

[13]  J. Clemente,et al.  Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice , 2013, Science.

[14]  Stephen P. Luby,et al.  A Strategy To Estimate Unknown Viral Diversity in Mammals , 2013, mBio.

[15]  T. Cover,et al.  Diet, microbial virulence, and Helicobacter pylori-induced gastric cancer , 2013, Gut microbes.

[16]  Zhen Yan,et al.  Origin of land plants using the multispecies coalescent model. , 2013, Trends in plant science.

[17]  Y. Loya,et al.  Bacteria appear to play important roles in both causing and preventing the bleaching of the coral Oculina patagonica , 2013 .

[18]  P. Bork,et al.  Richness of human gut microbiome correlates with metabolic markers , 2013, Nature.

[19]  T. Kepler,et al.  Microbial colonization influences early B-lineage development in the gut lamina propria , 2013, Nature.

[20]  Heidi Ledford US regulation misses some GM crops , 2013, Nature.

[21]  František Baluška,et al.  Microorganism and filamentous fungi drive evolution of plant synapses , 2013, Front. Cell. Infect. Microbiol..

[22]  E. Ruby,et al.  Initial symbiont contact orchestrates host-organ-wide transcriptional changes that prime tissue colonization. , 2013, Cell host & microbe.

[23]  Robert M. Brucker,et al.  The Hologenomic Basis of Speciation: Gut Bacteria Cause Hybrid Lethality in the Genus Nasonia , 2013, Science.

[24]  L. Forney,et al.  Influence of Vaginal Bacteria and d- and l-Lactic Acid Isomers on Vaginal Extracellular Matrix Metalloproteinase Inducer: Implications for Protection against Upper Genital Tract Infections , 2013, mBio.

[25]  F. Pérez-Cano,et al.  Cocoa Flavonoid-Enriched Diet Modulates Systemic and Intestinal Immunoglobulin Synthesis in Adult Lewis Rats , 2013, Nutrients.

[26]  Bernard Henrissat,et al.  Effects of Diet on Resource Utilization by a Model Human Gut Microbiota Containing Bacteroides cellulosilyticus WH2, a Symbiont with an Extensive Glycobiome , 2013, PLoS biology.

[27]  S. Bordenstein,et al.  Mom Knows Best: The Universality of Maternal Microbial Transmission , 2013, PLoS biology.

[28]  R. Dudler,et al.  Non contiguous-finished genome sequence of Pseudomonas syringae pathovar syringae strain B64 isolated from wheat , 2013, Standards in genomic sciences.

[29]  Frederic D Bushman,et al.  Rapid evolution of the human gut virome , 2013, Proceedings of the National Academy of Sciences.

[30]  J. Clemente,et al.  The Long-Term Stability of the Human Gut Microbiota , 2013, Science.

[31]  Joshua LaBaer,et al.  Reduced Incidence of Prevotella and Other Fermenters in Intestinal Microflora of Autistic Children , 2013, PloS one.

[32]  W. Young,et al.  Bowel microbiota moderate host physiological responses to dietary konjac in weanling rats. , 2013, The Journal of nutrition.

[33]  E. Weiss,et al.  Impact of dietary protein on microbiota composition and activity in the gastrointestinal tract of piglets in relation to gut health: a review. , 2013, Animal : an international journal of animal bioscience.

[34]  H. Koltai Strigolactones activate different hormonal pathways for regulation of root development in response to phosphate growth conditions. , 2013, Annals of botany.

[35]  W. D. de Vos,et al.  Bacterial Diversity in Meconium of Preterm Neonates and Evolution of Their Fecal Microbiota during the First Month of Life , 2013, PloS one.

[36]  M. Halpern,et al.  The protective role of endogenous bacterial communities in chironomid egg masses and larvae , 2013, The ISME Journal.

[37]  T. Dinan,et al.  Bifidobacterium infantis 35624 modulates host inflammatory processes beyond the gut , 2013, Gut microbes.

[38]  L. Hewitson,et al.  Improvements in Behavioral Symptoms following Antibiotic Therapy in a 14-Year-Old Male with Autism , 2013, Case reports in psychiatry.

[39]  Hongzhe Li,et al.  Archaea and Fungi of the Human Gut Microbiome: Correlations with Diet and Bacterial Residents , 2013, PloS one.

[40]  E. Denamur,et al.  Real-Time PCR for Quantitative Analysis of Human Commensal Escherichia coli Populations Reveals a High Frequency of Subdominant Phylogroups , 2013, Applied and Environmental Microbiology.

[41]  M. Fischbach,et al.  A metabolomic view of how the human gut microbiota impacts the host metabolome using humanized and gnotobiotic mice , 2013, The ISME Journal.

[42]  J. Zavala,et al.  Gut bacteria facilitate adaptation to crop rotation in the western corn rootworm , 2013, Proceedings of the National Academy of Sciences.

[43]  Edwin Crespo-Torres,et al.  Microbial Communities in Pre-Columbian Coprolites , 2013, PloS one.

[44]  J. Kang Gut Microbiota and Personalized Nutrition , 2013, Lifestyle Genomics.

[45]  A. Lizé,et al.  Gut microbiota and kin recognition. , 2013, Trends in ecology & evolution.

[46]  S. Foley,et al.  Isolation and characterization of soilborne virulent bacteriophages infecting the pathogen Rhodococcus equi , 2013, Journal of applied microbiology.

[47]  P. Salamon,et al.  Bacteriophage adhering to mucus provide a non–host-derived immunity , 2013, Proceedings of the National Academy of Sciences.

[48]  M. Gryndler,et al.  Mycorrhizal hyphae as ecological niche for highly specialized hypersymbionts – or just soil free-riders? , 2013, Front. Plant Sci..

[49]  Matthew R. Laird,et al.  IslandViewer update: improved genomic island discovery and visualization , 2013, Nucleic Acids Res..

[50]  Lucie Geurts,et al.  Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity , 2013, Proceedings of the National Academy of Sciences.

[51]  C. Vilchèze,et al.  Mycobacterium tuberculosis is extraordinarily sensitive to killing by a vitamin C-induced Fenton reaction , 2013, Nature Communications.

[52]  P. Schulze-Lefert,et al.  Structure and functions of the bacterial microbiota of plants. , 2013, Annual review of plant biology.

[53]  A. Amiot,et al.  Microbial dysbiosis and colon carcinogenesis: could colon cancer be considered a bacteria-related disease? , 2013, Therapeutic advances in gastroenterology.

[54]  J. Foster,et al.  Gut–brain axis: how the microbiome influences anxiety and depression , 2013, Trends in Neurosciences.

[55]  M. Sears,et al.  Infant gut microbiota and the hygiene hypothesis of allergic disease: impact of household pets and siblings on microbiota composition and diversity , 2013, Allergy, Asthma & Clinical Immunology.

[56]  Natalia Ivanova,et al.  Comparative Metagenomic and Metatranscriptomic Analysis of Hindgut Paunch Microbiota in Wood- and Dung-Feeding Higher Termites , 2013, PloS one.

[57]  A. Longatto-Filho,et al.  Phage Therapy Is Effective against Infection by Mycobacterium ulcerans in a Murine Footpad Model , 2013, PLoS neglected tropical diseases.

[58]  C. Pieterse,et al.  Unraveling Root Developmental Programs Initiated by Beneficial Pseudomonas spp. Bacteria1[C][W][OA] , 2013, Plant Physiology.

[59]  Hanja B. Brandl,et al.  Age-related differences in the cloacal microbiota of a wild bird species , 2013, BMC Ecology.

[60]  K. Nelson,et al.  Habitat degradation impacts black howler monkey (Alouatta pigra) gastrointestinal microbiomes , 2013, The ISME Journal.

[61]  Xiangyang Hu,et al.  Horizontal gene transfer in the innovation and adaptation of land plants , 2013, Plant signaling & behavior.

[62]  Leah M. Feazel,et al.  Sex Differences in the Gut Microbiome Drive Hormone-Dependent Regulation of Autoimmunity , 2013, Science.

[63]  J. M. Rodríguez,et al.  The human milk microbiota: origin and potential roles in health and disease. , 2013, Pharmacological research.

[64]  K. Whelan,et al.  Probiotics in the management of irritable bowel syndrome and inflammatory bowel disease , 2013, Current opinion in gastroenterology.

[65]  F. Bäckhed,et al.  The gut microbiota — masters of host development and physiology , 2013, Nature Reviews Microbiology.

[66]  Hongyu Zhang,et al.  The Impact of Environmental Heterogeneity and Life Stage on the Hindgut Microbiota of Holotrichia parallela Larvae (Coleoptera: Scarabaeidae) , 2013, PloS one.

[67]  W. Muir,et al.  MULTILEVEL SELECTION WITH KIN AND NON-KIN GROUPS, EXPERIMENTAL RESULTS WITH JAPANESE QUAIL (COTURNIX JAPONICA) , 2013, Evolution; international journal of organic evolution.

[68]  C. R. Stensvold,et al.  Waiting for the human intestinal Eukaryotome , 2013, The ISME Journal.

[69]  J. Gordon,et al.  Olfactory receptor responding to gut microbiota-derived signals plays a role in renin secretion and blood pressure regulation , 2013, Proceedings of the National Academy of Sciences.

[70]  A. Knoll,et al.  Animals in a bacterial world, a new imperative for the life sciences , 2013, Proceedings of the National Academy of Sciences.

[71]  Harsh Panwar,et al.  Probiotics as potential biotherapeutics in the management of type 2 diabetes – prospects and perspectives , 2013, Diabetes/metabolism research and reviews.

[72]  D. Frank,et al.  The role of the intestinal microbiota in type 1 diabetes. , 2013, Clinical immunology.

[73]  X. Yao,et al.  Molecular analysis of intestinal bacterial microbiota of broiler chickens fed diets containing fermented cottonseed meal. , 2013, Poultry science.

[74]  A. Moya,et al.  Meconium microbiota types dominated by lactic acid or enteric bacteria are differentially associated with maternal eczema and respiratory problems in infants , 2013, Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology.

[75]  J. Cheon Genetics of inflammatory bowel diseases: A comparison between Western and Eastern perspectives , 2013, Journal of gastroenterology and hepatology.

[76]  L. Logullo,et al.  Effect of synbiotic in constipated adult women - a randomized, double-blind, placebo-controlled study of clinical response. , 2013, Clinical nutrition.

[77]  Patrice D Cani,et al.  Diabetes, obesity and gut microbiota. , 2013, Best practice & research. Clinical gastroenterology.

[78]  Hongxiu Jiang,et al.  Correlation between Vertical Transmission of Hepatitis B Virus and the Expression of HBsAg in Ovarian Follicles and Placenta , 2013, PloS one.

[79]  E. Zoetendal,et al.  Duodenal infusion of donor feces for recurrent Clostridium difficile. , 2013, The New England journal of medicine.

[80]  Arne Traulsen,et al.  Bacterial colonization of Hydra hatchlings follows a robust temporal pattern , 2013, The ISME Journal.

[81]  Hywel T. P. Williams Phage-induced diversification improves host evolvability , 2013, BMC Evolutionary Biology.

[82]  R. Sandler,et al.  Fusobacterium Is Associated with Colorectal Adenomas , 2013, PloS one.

[83]  G. Gloor,et al.  Stool substitute transplant therapy for the eradication of Clostridium difficile infection: ‘RePOOPulating’ the gut , 2013, Microbiome.

[84]  N. Loman,et al.  Defining bacterial species in the genomic era: insights from the genus Acinetobacter , 2012, BMC Microbiology.

[85]  Lin‐Fa Wang,et al.  Bats and their virome: an important source of emerging viruses capable of infecting humans , 2012, Current Opinion in Virology.

[86]  Cory J. Krediet,et al.  Members of native coral microbiota inhibit glycosidases and thwart colonization of coral mucus by an opportunistic pathogen , 2012, The ISME Journal.

[87]  John Penders,et al.  Probiotics in the Management of Inflammatory Bowel Disease , 2012, Drugs.

[88]  C. Mølgaard,et al.  Probiotics to Adolescents With Obesity: Effects on Inflammation and Metabolic Syndrome , 2012, Journal of pediatric gastroenterology and nutrition.

[89]  Scott F. Gilbert,et al.  A Symbiotic View of Life: We Have Never Been Individuals , 2012, The Quarterly Review of Biology.

[90]  A. Kirby Synergistic Action of Gentamicin and Bacteriophage in a Continuous Culture Population of Staphylococcus aureus , 2012, PloS one.

[91]  E. Zoetendal,et al.  Transfer of intestinal microbiota from lean donors increases insulin sensitivity in individuals with metabolic syndrome. , 2012, Gastroenterology.

[92]  Qiang Feng,et al.  A metagenome-wide association study of gut microbiota in type 2 diabetes , 2012, Nature.

[93]  M. Kleerebezem,et al.  The impact of probiotics and prebiotics on the immune system , 2012, Nature Reviews Immunology.

[94]  T. Dinan,et al.  Mind-altering microorganisms: the impact of the gut microbiota on brain and behaviour , 2012, Nature Reviews Neuroscience.

[95]  V. Tremaroli,et al.  Functional interactions between the gut microbiota and host metabolism , 2012, Nature.

[96]  J. Gordon,et al.  Diversity, stability and resilience of the human gut microbiota , 2012, Nature.

[97]  Joshua S. Weitz,et al.  Ocean viruses and their effects on microbial communities and biogeochemical cycles , 2012, F1000 biology reports.

[98]  A. Berlec Novel techniques and findings in the study of plant microbiota: search for plant probiotics. , 2012, Plant science : an international journal of experimental plant biology.

[99]  T. Heidmann,et al.  From ancestral infectious retroviruses to bona fide cellular genes: role of the captured syncytins in placentation. , 2012, Placenta.

[100]  O. Tasaki,et al.  Probiotic/Synbiotic Therapy for Treating Critically Ill Patients from a Gut Microbiota Perspective , 2012, Digestive Diseases and Sciences.

[101]  J. Clemente,et al.  Distinct cutaneous bacterial assemblages in a sampling of South American Amerindians and US residents , 2012, The ISME Journal.

[102]  Peter C. Fineran,et al.  Advances in Bacteriophage-Mediated Control of Plant Pathogens , 2012, International journal of microbiology.

[103]  A. Dorrance,et al.  Complete Genome Sequence of a Novel Pararetrovirus Isolated from Soybean , 2012, Journal of Virology.

[104]  F. Hu,et al.  Cardiovascular Benefits of Dietary Fiber , 2012, Current Atherosclerosis Reports.

[105]  N. Loman,et al.  High-throughput bacterial genome sequencing: an embarrassment of choice, a world of opportunity , 2012, Nature Reviews Microbiology.

[106]  L. T. Angenent,et al.  Host Remodeling of the Gut Microbiome and Metabolic Changes during Pregnancy , 2012, Cell.

[107]  F. Shanahan The microbiota in inflammatory bowel disease: friend, bystander, and sometime-villain. , 2012, Nutrition reviews.

[108]  Robert M. Brucker,et al.  Speciation by symbiosis. , 2012, Trends in ecology & evolution.

[109]  R. Amann,et al.  Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota , 2012, Nature.

[110]  C. Pieterse,et al.  The rhizosphere microbiome and plant health. , 2012, Trends in plant science.

[111]  W. Garrett,et al.  A complex microworld in the gut: Gut microbiota and cardiovascular disease connectivity , 2012, Nature Medicine.

[112]  D. Morgavi,et al.  Rumen microbial and fermentation characteristics are affected differently by bacterial probiotic supplementation during induced lactic and subacute acidosis in sheep , 2012, BMC Microbiology.

[113]  D. Sinderen,et al.  Gut microbiota composition correlates with diet and health in the elderly , 2012, Nature.

[114]  G. Reid,et al.  Bioremediation and Tolerance of Humans to Heavy Metals through Microbial Processes: a Potential Role for Probiotics? , 2012, Applied and Environmental Microbiology.

[115]  D. Raoult,et al.  Molecular Detection of Eukaryotes in a Single Human Stool Sample from Senegal , 2012, PloS one.

[116]  R. V. Thurber,et al.  Unique nucleocytoplasmic dsDNA and +ssRNA viruses are associated with the dinoflagellate endosymbionts of corals , 2012, The ISME Journal.

[117]  A. Correa,et al.  Specificity is rarely absolute in coral–algal symbiosis: implications for coral response to climate change , 2012, Proceedings of the Royal Society B: Biological Sciences.

[118]  S. Salminen,et al.  Probiotics Modulate Host-Microbe Interaction in the Placenta and Fetal Gut: A Randomized, Double-Blind, Placebo-Controlled Trial , 2012, Neonatology.

[119]  M. Nikolich,et al.  Can phage effectively treat multidrug-resistant plague? , 2012, Bacteriophage.

[120]  P. Luciw,et al.  Randomized pilot trial of a synbiotic dietary supplement in chronic HIV-1 infection , 2012, BMC Complementary and Alternative Medicine.

[121]  N. Moran,et al.  Functional diversity within the simple gut microbiota of the honey bee , 2012, Proceedings of the National Academy of Sciences.

[122]  T. Bosch Understanding complex host-microbe interactions in Hydra , 2012, Gut microbes.

[123]  A. Macpherson,et al.  Interactions Between the Microbiota and the Immune System , 2012, Science.

[124]  S. C. Winans,et al.  Agrobacterium tumefaciens can obtain sulphur from an opine that is synthesized by octopine synthase using S‐methylmethionine as a substrate , 2012, Molecular microbiology.

[125]  C. Zera,et al.  Delivery by caesarean section and risk of obesity in preschool age children: a prospective cohort study , 2012, Archives of Disease in Childhood.

[126]  Katherine H. Huang,et al.  Structure, Function and Diversity of the Healthy Human Microbiome , 2012, Nature.

[127]  T. Fukatsu,et al.  Symbiont-mediated insecticide resistance , 2012, Proceedings of the National Academy of Sciences.

[128]  K. Ray Microbiota: Tolerating gluten—a role for gut microbiota in celiac disease? , 2012, Nature Reviews Gastroenterology &Hepatology.

[129]  Y. Loya,et al.  Phage therapy of the white plague-like disease of Favia favus in the Red Sea , 2012, Coral Reefs.

[130]  S. Aksoy,et al.  Obligate Symbionts Activate Immune System Development in the Tsetse Fly , 2012, Journal of Immunology.

[131]  A. K. Hansen,et al.  Patterns of Early Gut Colonization Shape Future Immune Responses of the Host , 2012, PloS one.

[132]  C. Feschotte,et al.  Endogenous viruses: insights into viral evolution and impact on host biology , 2012, Nature Reviews Genetics.

[133]  I. Mizrahi,et al.  Composition and Similarity of Bovine Rumen Microbiota across Individual Animals , 2012, PloS one.

[134]  P. O’Farrell,et al.  Barriers to male transmission of mitochondrial DNA in sperm development. , 2012, Developmental cell.

[135]  P. Kerr Myxomatosis in Australia and Europe: a model for emerging infectious diseases. , 2012, Antiviral research.

[136]  W. Chung,et al.  The Effect of a Multispecies Probiotic Mixture on the Symptoms and Fecal Microbiota in Diarrhea-dominant Irritable Bowel Syndrome: A Randomized, Double-blind, Placebo-controlled Trial , 2012, Journal of clinical gastroenterology.

[137]  M. Williamson,et al.  Extinction and climate change , 2012, Nature.

[138]  H. Doddapaneni,et al.  Cyanophora paradoxa Genome Elucidates Origin of Photosynthesis in Algae and Plants , 2012, Science.

[139]  E. Danchin,et al.  Lateral gene transfers have polished animal genomes: lessons from nematodes , 2012, Front. Cell. Inf. Microbio..

[140]  Ling Zhong,et al.  Metaproteogenomic analysis of a community of sponge symbionts , 2012, The ISME Journal.

[141]  Robert M. Brucker,et al.  THE ROLES OF HOST EVOLUTIONARY RELATIONSHIPS (GENUS: NASONIA) AND DEVELOPMENT IN STRUCTURING MICROBIAL COMMUNITIES , 2012, Evolution; international journal of organic evolution.

[142]  A. Goyal,et al.  The current trends and future perspectives of prebiotics research: a review , 2012, 3 Biotech.

[143]  Peer Bork,et al.  The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates , 2012, The ISME Journal.

[144]  Hang Sun,et al.  Widespread impact of horizontal gene transfer on plant colonization of land , 2012, Nature Communications.

[145]  A. Osterhaus,et al.  Metagenomic Analysis of the Viral Flora of Pine Marten and European Badger Feces , 2011, Journal of Virology.

[146]  H. Jenkinson Beyond the oral microbiome. , 2011, Environmental microbiology.

[147]  V. Paul,et al.  Diversity and dynamics of bacterial communities in early life stages of the Caribbean coral Porites astreoides , 2011, The ISME Journal.

[148]  A. Manges,et al.  Systematic review of intestinal microbiota transplantation (fecal bacteriotherapy) for recurrent Clostridium difficile infection. , 2011, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[149]  R. Gates,et al.  The nature and taxonomic composition of coral symbiomes as drivers of performance limits in scleractinian corals , 2011 .

[150]  P. Schmid-Hempel,et al.  Socially transmitted gut microbiota protect bumble bees against an intestinal parasite , 2011, Proceedings of the National Academy of Sciences.

[151]  E. Koonin,et al.  Common origins and host-dependent diversity of plant and animal viromes. , 2011, Current opinion in virology.

[152]  P. A. Guerra Evaluating the life‐history trade‐off between dispersal capability and reproduction in wing dimorphic insects: a meta‐analysis , 2011, Biological reviews of the Cambridge Philosophical Society.

[153]  J. Fuhrman,et al.  Marine viruses and global climate change. , 2011, FEMS microbiology reviews.

[154]  J. Iredell,et al.  Bacteriophage therapy for refractory Pseudomonas aeruginosa urinary tract infection. , 2011, Journal of medical microbiology.

[155]  S. Guandalini Probiotics for Prevention and Treatment of Diarrhea , 2011, Journal of clinical gastroenterology.

[156]  A. Chervonsky,et al.  Successful Transmission of a Retrovirus Depends on the Commensal Microbiota , 2011, Science.

[157]  Andrea J Pruijssers,et al.  Intestinal Microbiota Promote Enteric Virus Replication and Systemic Pathogenesis , 2011, Science.

[158]  Michael W Taylor,et al.  Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges , 2011, The ISME Journal.

[159]  Nita H. Salzman,et al.  The potter’s wheel: the host’s role in sculpting its microbiota , 2011, Cellular and Molecular Life Sciences.

[160]  F. Bushman,et al.  The human gut virome: inter-individual variation and dynamic response to diet. , 2011, Genome research.

[161]  E. Kiers,et al.  Life Histories of Symbiotic Rhizobia and Mycorrhizal Fungi , 2011, Current Biology.

[162]  M. Blaser,et al.  The Human Microbiota as a Marker for Migrations of Individuals and Populations , 2011 .

[163]  J. Bae,et al.  Diversity and Abundance of Single-Stranded DNA Viruses in Human Feces , 2011, Applied and Environmental Microbiology.

[164]  E. Herniou,et al.  Paleozoic origin of insect large dsDNA viruses , 2011, Proceedings of the National Academy of Sciences.

[165]  P. Simmonds,et al.  The Fecal Virome of Pigs on a High-Density Farm , 2011, Journal of Virology.

[166]  P. Sharp,et al.  Origins of HIV and the AIDS pandemic. , 2011, Cold Spring Harbor perspectives in medicine.

[167]  P. Sansonetti,et al.  Intestinal mucosal adherence and translocation of commensal bacteria at the early onset of type 2 diabetes: molecular mechanisms and probiotic treatment , 2011, EMBO molecular medicine.

[168]  R. K. Rose,et al.  The Fecal Viral Flora of Wild Rodents , 2011, PLoS pathogens.

[169]  E. Archie,et al.  Animal behaviour meets microbial ecology , 2011, Animal Behaviour.

[170]  M. McFall-Ngai,et al.  Metaorganisms as the new frontier. , 2011, Zoology.

[171]  T. Dinan,et al.  Ingestion of Lactobacillus strain regulates emotional behavior and central GABA receptor expression in a mouse via the vagus nerve , 2011, Proceedings of the National Academy of Sciences.

[172]  M. Blaser,et al.  Antibiotic overuse: Stop the killing of beneficial bacteria , 2011, Nature.

[173]  D. Read,et al.  The dawn of symbiosis between plants and fungi , 2011, Biology Letters.

[174]  Daniel J. G. Lahr,et al.  Estimating the timing of early eukaryotic diversification with multigene molecular clocks , 2011, Proceedings of the National Academy of Sciences.

[175]  D. Dimitrov The human gutome: nutrigenomics of the host-microbiome interactions. , 2011, Omics : a journal of integrative biology.

[176]  K. McCoy,et al.  The intestinal microbiota affect central levels of brain-derived neurotropic factor and behavior in mice. , 2011, Gastroenterology.

[177]  M. Jung,et al.  Comparative Analysis of Korean Human Gut Microbiota by Barcoded Pyrosequencing , 2011, PloS one.

[178]  E. Delwart,et al.  The Fecal Viral Flora of California Sea Lions , 2011, Journal of Virology.

[179]  J. Faith,et al.  Predicting a Human Gut Microbiota’s Response to Diet in Gnotobiotic Mice , 2011, Science.

[180]  W. Sakamoto,et al.  Widespread Endogenization of Genome Sequences of Non-Retroviral RNA Viruses into Plant Genomes , 2011, PLoS pathogens.

[181]  Patrice D Cani,et al.  Involvement of gut microbial fermentation in the metabolic alterations occurring in n-3 polyunsaturated fatty acids-depleted mice , 2011, Nutrition & metabolism.

[182]  Andreas Wilke,et al.  Synergistic use of plant-prokaryote comparative genomics for functional annotations , 2011, BMC Genomics.

[183]  T. Moghiman,et al.  Effect of a New Synbiotic Mixture on Atopic Dermatitis in Children: a Randomized-Controlled Trial , 2011, Iranian journal of pediatrics.

[184]  D. Segal,et al.  Symbiotic bacteria are responsible for diet-induced mating preference in Drosophila melanogaster, providing support for the hologenome concept of evolution , 2011, Gut microbes.

[185]  P. Bakker,et al.  Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria , 2011, Science.

[186]  N. Hall,et al.  Towards the Human Colorectal Cancer Microbiome , 2011, PloS one.

[187]  J. Clemente,et al.  Diet Drives Convergence in Gut Microbiome Functions Across Mammalian Phylogeny and Within Humans , 2011, Science.

[188]  Peer Bork,et al.  Enterotypes of the human gut microbiome , 2011, Nature.

[189]  C. Erridge Diet, commensals and the intestine as sources of pathogen-associated molecular patterns in atherosclerosis, type 2 diabetes and non-alcoholic fatty liver disease. , 2011, Atherosclerosis.

[190]  Takashi Yamada,et al.  Biocontrol of Ralstonia solanacearum by Treatment with Lytic Bacteriophages , 2011, Applied and Environmental Microbiology.

[191]  F. Rohwer,et al.  Consider something viral in your research , 2011, Nature Reviews Microbiology.

[192]  A. Himler,et al.  Rapid Spread of a Bacterial Symbiont in an Invasive Whitefly Is Driven by Fitness Benefits and Female Bias , 2011, Science.

[193]  T. Thomas,et al.  Composition, uniqueness and variability of the epiphytic bacterial community of the green alga Ulva australis , 2011, The ISME Journal.

[194]  B. Finlay,et al.  Shifting the balance: antibiotic effects on host–microbiota mutualism , 2011, Nature Reviews Microbiology.

[195]  Zhongtang Yu,et al.  Status of the phylogenetic diversity census of ruminal microbiomes. , 2011, FEMS microbiology ecology.

[196]  J. Vorholt,et al.  Protection of Arabidopsis thaliana against Leaf-Pathogenic Pseudomonas syringae by Sphingomonas Strains in a Controlled Model System , 2011, Applied and Environmental Microbiology.

[197]  T. Sørensen,et al.  Childhood overweight after establishment of the gut microbiota: the role of delivery mode, pre-pregnancy weight and early administration of antibiotics , 2011, International Journal of Obesity.

[198]  Susan M. Huse,et al.  Exploring the oral microbiota of children at various developmental stages of their dentition in the relation to their oral health , 2011, BMC Medical Genomics.

[199]  J. Foster,et al.  Reduced anxiety‐like behavior and central neurochemical change in germ‐free mice , 2011, Neurogastroenterology and motility : the official journal of the European Gastrointestinal Motility Society.

[200]  J. Cryan,et al.  The microbiome‐gut‐brain axis: from bowel to behavior , 2011, Neurogastroenterology and motility : the official journal of the European Gastrointestinal Motility Society.

[201]  S. Abedon,et al.  Phage treatment of human infections , 2011, Bacteriophage.

[202]  Rob Knight,et al.  The mind-body-microbial continuum , 2011, Dialogues in clinical neuroscience.

[203]  G. Gibson,et al.  Synbiotics in health and disease. , 2011, Annual review of food science and technology.

[204]  H. Seifert,et al.  Opportunity and Means: Horizontal Gene Transfer from the Human Host to a Bacterial Pathogen , 2011, mBio.

[205]  M. Roossinck The good viruses: viral mutualistic symbioses , 2011, Nature Reviews Microbiology.

[206]  P. Palukaitis,et al.  Excision and Episomal Replication of Cauliflower mosaic virus Integrated into a Plant Genome1[C][W][OA] , 2011, Plant Physiology.

[207]  Ahmed Moustafa,et al.  The making of a photosynthetic animal , 2011, Journal of Experimental Biology.

[208]  M. Roossinck Changes in Population Dynamics in Mutualistic versus Pathogenic Viruses , 2011, Viruses.

[209]  S. Mazmanian,et al.  Has the Microbiota Played a Critical Role in the Evolution of the Adaptive Immune System? , 2010, Science.

[210]  J. R. Úrbez-Torres,et al.  Deep sequencing evidence from single grapevine plants reveals a virome dominated by mycoviruses , 2010, Archives of Virology.

[211]  J. Utzinger,et al.  The effects of iron fortification on the gut microbiota in African children: a randomized controlled trial in Cote d'Ivoire. , 2010, The American journal of clinical nutrition.

[212]  Bryan A. White,et al.  Characterization of the Fecal Microbiome from Non-Human Wild Primates Reveals Species Specific Microbial Communities , 2010, PloS one.

[213]  P. Hugenholtz,et al.  Evolutionary Relationships of Wild Hominids Recapitulated by Gut Microbial Communities , 2010, PLoS biology.

[214]  D. Segal,et al.  Commensal bacteria play a role in mating preference of Drosophila melanogaster , 2010, Proceedings of the National Academy of Sciences.

[215]  A. Katzourakis,et al.  Endogenous Viral Elements in Animal Genomes , 2010, PLoS genetics.

[216]  R. Knight,et al.  Postprandial remodeling of the gut microbiota in Burmese pythons , 2010, The ISME Journal.

[217]  Rob Knight,et al.  The ecology of the phyllosphere: geographic and phylogenetic variability in the distribution of bacteria on tree leaves. , 2010, Environmental microbiology.

[218]  S. Salminen,et al.  Effect of mother's weight on infant's microbiota acquisition, composition, and activity during early infancy: a prospective follow-up study initiated in early pregnancy. , 2010, The American journal of clinical nutrition.

[219]  Rob Knight,et al.  Human oral, gut, and plaque microbiota in patients with atherosclerosis , 2010, Proceedings of the National Academy of Sciences.

[220]  F. Bäckhed,et al.  Effects of gut microbiota on obesity and atherosclerosis via modulation of inflammation and lipid metabolism , 2010, Journal of internal medicine.

[221]  G. Enns,et al.  Suboptimal outcomes in patients with PKU treated early with diet alone: revisiting the evidence. , 2010, Molecular genetics and metabolism.

[222]  S. Saini,et al.  Potential of probiotics in controlling cardiovascular diseases , 2010, Journal of cardiovascular disease research.

[223]  C. Feschotte,et al.  Promiscuous DNA: horizontal transfer of transposable elements and why it matters for eukaryotic evolution. , 2010, Trends in ecology & evolution.

[224]  S. Tabata,et al.  Community- and genome-based views of plant-associated bacteria: plant-bacterial interactions in soybean and rice. , 2010, Plant & cell physiology.

[225]  P. Sharp,et al.  The evolution of HIV-1 and the origin of AIDS , 2010, Philosophical Transactions of the Royal Society B: Biological Sciences.

[226]  S. Massart,et al.  Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa , 2010, Proceedings of the National Academy of Sciences.

[227]  Nathalie M. Delzenne,et al.  Prebiotic effects: metabolic and health benefits , 2010, British Journal of Nutrition.

[228]  Eunseog Youn,et al.  Pyrosequencing study of fecal microflora of autistic and control children. , 2010, Anaerobe.

[229]  L. T. Angenent,et al.  Succession of microbial consortia in the developing infant gut microbiome , 2010, Proceedings of the National Academy of Sciences.

[230]  T. Bosch,et al.  Why bacteria matter in animal development and evolution , 2010, BioEssays : news and reviews in molecular, cellular and developmental biology.

[231]  B. Finlay,et al.  Gut microbiota in health and disease. , 2010, Physiological reviews.

[232]  J. Doré,et al.  Intestinal Microbiota of 6-week-old Infants Across Europe: Geographic Influence Beyond Delivery Mode, Breast-feeding, and Antibiotics , 2010, Journal of pediatric gastroenterology and nutrition.

[233]  M. Heikenwalder,et al.  Reversible Microbial Colonization of Germ-Free Mice Reveals the Dynamics of IgA Immune Responses , 2010, Science.

[234]  C. Herrera,et al.  Nectar yeasts warm the flowers of a winter-blooming plant , 2010, Proceedings of the Royal Society B: Biological Sciences.

[235]  R. Knight,et al.  Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns , 2010, Proceedings of the National Academy of Sciences.

[236]  M. Liong,et al.  Cholesterol-Lowering Effects of Probiotics and Prebiotics: A Review of in Vivo and in Vitro Findings , 2010, International journal of molecular sciences.

[237]  V. Paul,et al.  Bacterial Acquisition in Juveniles of Several Broadcast Spawning Coral Species , 2010, PloS one.

[238]  C. Dye,et al.  The Population Dynamics and Control of Tuberculosis , 2010, Science.

[239]  D. A. van der Windt,et al.  Diagnostic testing for celiac disease among patients with abdominal symptoms: a systematic review. , 2010, JAMA.

[240]  F. Bäckhed,et al.  The gut microbiota modulates host energy and lipid metabolism in mice[S] , 2010, Journal of Lipid Research.

[241]  L. Mofenson Antiretroviral drugs to prevent breastfeeding HIV transmission , 2010, Antiviral therapy.

[242]  S. Normark,et al.  Commensal pathogens, with a focus on Streptococcus pneumoniae, and interactions with the human host. , 2010, Experimental cell research.

[243]  N. Moran,et al.  Lateral Transfer of Genes from Fungi Underlies Carotenoid Production in Aphids , 2010, Science.

[244]  G. Michel,et al.  Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota , 2010, Nature.

[245]  Bernard Henrissat,et al.  Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins , 2010, Proceedings of the National Academy of Sciences.

[246]  J. Bach,et al.  The ‘hygiene hypothesis’ for autoimmune and allergic diseases: an update , 2010, Clinical and experimental immunology.

[247]  D. Nilsson,et al.  Annual Variations in the Diversity, Viability, and Origin of Airborne Bacteria , 2010, Applied and Environmental Microbiology.

[248]  S. Sunagawa,et al.  Threatened Corals Provide Underexplored Microbial Habitats , 2010, PloS one.

[249]  P. Bork,et al.  A human gut microbial gene catalogue established by metagenomic sequencing , 2010, Nature.

[250]  S. Colella,et al.  Genomic insight into the amino acid relations of the pea aphid, Acyrthosiphon pisum, with its symbiotic bacterium Buchnera aphidicola , 2010, Insect molecular biology.

[251]  H. Durand,et al.  Probiotics in animal nutrition and health. , 2010, Beneficial microbes.

[252]  M. Weinbauer,et al.  Trade-Offs between Competition and Defense Specialists among Unicellular Planktonic Organisms: the “Killing the Winner” Hypothesis Revisited , 2010, Microbiology and Molecular Biology Reviews.

[253]  S. Bulgheresi,et al.  A complex journey: transmission of microbial symbionts , 2010, Nature Reviews Microbiology.

[254]  K. Laitinen,et al.  Impact of maternal probiotic-supplemented dietary counselling on pregnancy outcome and prenatal and postnatal growth: a double-blind, placebo-controlled study , 2010, British Journal of Nutrition.

[255]  I. Brown,et al.  Synbiotic intervention of Bifidobacterium lactis and resistant starch protects against colorectal cancer development in rats. , 2010, Carcinogenesis.

[256]  B. Burton-Freeman,et al.  The role of innovation and technology in meeting individual nutritional needs. , 2010, The Journal of nutrition.

[257]  Danielle M. Fuselier,et al.  The Carnivorous Pale Pitcher Plant Harbors Diverse, Distinct, and Time-Dependent Bacterial Communities , 2010, Applied and Environmental Microbiology.

[258]  Jeffrey N. Weiser,et al.  Recognition of Peptidoglycan from the Microbiota by Nod1 Enhances Systemic Innate Immunity , 2010, Nature Medicine.

[259]  T. Gojobori,et al.  Endogenous non-retroviral RNA virus elements in mammalian genomes , 2010, Nature.

[260]  C. Médigue,et al.  Experimental Evolution of a Plant Pathogen into a Legume Symbiont , 2010, PLoS biology.

[261]  T. Golovkina,et al.  Common Threads in Persistent Viral Infections , 2009, Journal of Virology.

[262]  G. Sharon,et al.  The hologenome theory of evolution contains Lamarckian aspects within a Darwinian framework. , 2009, Environmental microbiology.

[263]  Fiona S. L. Brinkman,et al.  The Association of Virulence Factors with Genomic Islands , 2009, PloS one.

[264]  R. Knight,et al.  The Effect of Diet on the Human Gut Microbiome: A Metagenomic Analysis in Humanized Gnotobiotic Mice , 2009, Science Translational Medicine.

[265]  M. Blaser,et al.  What are the consequences of the disappearing human microbiota? , 2009, Nature Reviews Microbiology.

[266]  R. Seaton,et al.  Faecal transplant for recurrent Clostridium difficile-associated diarrhoea: a UK case series. , 2009, QJM : monthly journal of the Association of Physicians.

[267]  H. Insam,et al.  Diet-related composition of the gut microbiota of Lumbricus rubellus as revealed by a molecular fingerprinting technique and cloning , 2009 .

[268]  J. Glenn Morris,et al.  Cholera transmission: the host, pathogen and bacteriophage dynamic , 2009, Nature Reviews Microbiology.

[269]  J. Batut,et al.  Establishing nitrogen-fixing symbiosis with legumes: how many rhizobium recipes? , 2009, Trends in microbiology.

[270]  J. Chiquette Evaluation of the protective effect of probiotics fed to dairy cows during a subacute ruminal acidosis challenge. , 2009 .

[271]  B. Roschitzki,et al.  Community proteogenomics reveals insights into the physiology of phyllosphere bacteria , 2009, Proceedings of the National Academy of Sciences.

[272]  B. Lugtenberg,et al.  Plant-growth-promoting rhizobacteria. , 2009, Annual review of microbiology.

[273]  P. Turnbaugh,et al.  The core gut microbiome, energy balance and obesity , 2009, The Journal of physiology.

[274]  Rainer Hedrich,et al.  Agrobacterium tumefaciens Promotes Tumor Induction by Modulating Pathogen Defense in Arabidopsis thaliana[W] , 2009, The Plant Cell Online.

[275]  Y. Yamaoka,et al.  Helicobacter pylori typing as a tool for tracking human migration. , 2009, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

[276]  B. Björkstén The hygiene hypothesis: do we still believe in it? , 2009, Nestle Nutrition workshop series. Paediatric programme.

[277]  N. Moran,et al.  Bacteriophages Encode Factors Required for Protection in a Symbiotic Mutualism , 2009, Science.

[278]  D. B. Nedwell,et al.  An analysis of the contents of the anal scent pockets of Herpestes auropunctatus (Carnivora: Viverridae) , 2009 .

[279]  J. Jansson,et al.  Changes in the Composition of the Human Fecal Microbiome After Bacteriotherapy for Recurrent Clostridium difficile-associated Diarrhea , 2009, Journal of clinical gastroenterology.

[280]  E. Änggård,et al.  A controlled clinical trial of a therapeutic bacteriophage preparation in chronic otitis due to antibiotic‐resistant Pseudomonas aeruginosa; a preliminary report of efficacy , 2009, Clinical otolaryngology : official journal of ENT-UK ; official journal of Netherlands Society for Oto-Rhino-Laryngology & Cervico-Facial Surgery.

[281]  P. Opolon,et al.  Syncytin-A knockout mice demonstrate the critical role in placentation of a fusogenic, endogenous retrovirus-derived, envelope gene , 2009, Proceedings of the National Academy of Sciences.

[282]  E. Martínez-Romero Coevolution in Rhizobium-legume symbiosis? , 2009, DNA and cell biology.

[283]  R. Knight,et al.  Microbial community profiling for human microbiome projects: Tools, techniques, and challenges. , 2009, Genome research.

[284]  Y. Gibon,et al.  Absence of symbiotic leghemoglobins alters bacteroid and plant cell differentiation during development of Lotus japonicus root nodules. , 2009, Molecular plant-microbe interactions : MPMI.

[285]  J. Doré,et al.  The Firmicutes/Bacteroidetes ratio of the human microbiota changes with age , 2009, BMC Microbiology.

[286]  H. Nikaido Multidrug resistance in bacteria. , 2009, Annual review of biochemistry.

[287]  R. D. Hatton,et al.  Developmental plasticity of Th17 and Treg cells. , 2009, Current opinion in immunology.

[288]  E. Kramarsky-Winter,et al.  An in situ method for cultivating microorganisms using a double encapsulation technique. , 2009, FEMS microbiology ecology.

[289]  C. Deming,et al.  Topographical and Temporal Diversity of the Human Skin Microbiome , 2009, Science.

[290]  D. Winstanley,et al.  Densovirus induces winged morphs in asexual clones of the rosy apple aphid, Dysaphis plantaginea , 2009, Proceedings of the National Academy of Sciences.

[291]  F. Rohwer,et al.  Viruses manipulate the marine environment , 2009, Nature.

[292]  C. Hauert,et al.  Spatial dynamics of ecological public goods , 2009, Proceedings of the National Academy of Sciences.

[293]  G. Dimopoulos,et al.  Implication of the Mosquito Midgut Microbiota in the Defense against Malaria Parasites , 2009, PLoS pathogens.

[294]  M. Phillips Gut Reaction: Environmental Effects on the Human Microbiota , 2009, Environmental health perspectives.

[295]  Shinichi Sunagawa,et al.  Bacterial diversity and White Plague Disease-associated community changes in the Caribbean coral Montastraea faveolata , 2009, The ISME Journal.

[296]  Paul S. Cohen,et al.  Precolonized Human Commensal Escherichia coli Strains Serve as a Barrier to E. coli O157:H7 Growth in the Streptomycin-Treated Mouse Intestine , 2009, Infection and Immunity.

[297]  Jungeun Lee,et al.  Antibacterial Efficacy of Phages against Pseudomonas aeruginosa Infections in Mice and Drosophila melanogaster , 2009, Antimicrobial Agents and Chemotherapy.

[298]  Bernard Henrissat,et al.  Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla , 2009, Proceedings of the National Academy of Sciences.

[299]  Hong Shen,et al.  The challenge of discovering beneficial viruses. , 2009, Journal of medical microbiology.

[300]  T. Bosch Hydra and the evolution of stem cells , 2009, BioEssays : news and reviews in molecular, cellular and developmental biology.

[301]  Tian-Xing Wu,et al.  Prebiotic oligosaccharides change the concentrations of short-chain fatty acids and the microbial population of mouse bowel , 2009, Journal of Zhejiang University SCIENCE B.

[302]  I. Wilson,et al.  Gut microbiome modulates the toxicity of hydrazine: a metabonomic study. , 2009, Molecular bioSystems.

[303]  W. R. Wikoff,et al.  Metabolomics analysis reveals large effects of gut microflora on mammalian blood metabolites , 2009, Proceedings of the National Academy of Sciences.

[304]  K. Heath,et al.  Stabilizing Mechanisms in a Legume-Rhizobium Mutualism , 2009, Evolution; international journal of organic evolution.

[305]  G. Steward,et al.  RNA viruses in the sea. , 2009, FEMS microbiology reviews.

[306]  J. Whitfield,et al.  Making Nice with Viruses , 2009, Science.

[307]  S. V. Nyholm,et al.  Recognition between symbiotic Vibrio fischeri and the haemocytes of Euprymna scolopes. , 2009, Environmental microbiology.

[308]  L. Dolan Body building on land: morphological evolution of land plants. , 2009, Current opinion in plant biology.

[309]  N. D. Fastinger,et al.  Dietary protein concentration affects intestinal microbiota of adult cats: a study using DGGE and qPCR to evaluate differences in microbial populations in the feline gastrointestinal tract. , 2009, Journal of animal physiology and animal nutrition.

[310]  R. Satokari,et al.  Bifidobacterium and Lactobacillus DNA in the human placenta , 2009, Letters in applied microbiology.

[311]  J. Chapman,et al.  The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome , 2008, Proceedings of the National Academy of Sciences.

[312]  L. Sumner,et al.  Virus infection improves drought tolerance. , 2008, The New phytologist.

[313]  A. Casadevall,et al.  Ionizing radiation: how fungi cope, adapt, and exploit with the help of melanin. , 2008, Current opinion in microbiology.

[314]  E. Koonin,et al.  The Big Bang of picorna-like virus evolution antedates the radiation of eukaryotic supergroups , 2008, Nature Reviews Microbiology.

[315]  D. Bhattacharya,et al.  Horizontal gene transfer of the algal nuclear gene psbO to the photosynthetic sea slug Elysia chlorotica , 2008, Proceedings of the National Academy of Sciences.

[316]  E. Wilson,et al.  The Superorganism: The Beauty, Elegance, and Strangeness of Insect Societies , 2008 .

[317]  Les Dethlefsen,et al.  The Pervasive Effects of an Antibiotic on the Human Gut Microbiota, as Revealed by Deep 16S rRNA Sequencing , 2008, PLoS biology.

[318]  B. Roe,et al.  A core gut microbiome in obese and lean twins , 2008, Nature.

[319]  J. Berzofsky,et al.  Commensal DNA limits regulatory T cell conversion and is a natural adjuvant of intestinal immune responses. , 2008, Immunity.

[320]  M. Blaser Disappearing Microbiota: Helicobacter pylori Protection against Esophageal Adenocarcinoma , 2008, Cancer Prevention Research.

[321]  N. Dubilier,et al.  Symbiotic diversity in marine animals: the art of harnessing chemosynthesis , 2008, Nature Reviews Microbiology.

[322]  A. Stow,et al.  Chemical and genetic defenses against disease in insect societies , 2008, Brain, Behavior, and Immunity.

[323]  Diethard Tautz,et al.  An Ancient Evolutionary Origin of Genes Associated with Human Genetic Diseases , 2008, Molecular biology and evolution.

[324]  P. Donnelly,et al.  Is Mate Choice in Humans MHC-Dependent? , 2008, PLoS genetics.

[325]  B. Finlay,et al.  Antibiotic-Induced Perturbations of the Intestinal Microbiota Alter Host Susceptibility to Enteric Infection , 2008, Infection and Immunity.

[326]  S. Lindow,et al.  Living in two worlds: the plant and insect lifestyles of Xylella fastidiosa. , 2008, Annual review of phytopathology.

[327]  M. Lombardo Access to mutualistic endosymbiotic microbes: an underappreciated benefit of group living , 2008, Behavioral Ecology and Sociobiology.

[328]  E. Rosenberg,et al.  Role of microorganisms in the evolution of animals and plants: the hologenome theory of evolution. , 2008, FEMS microbiology reviews.

[329]  P. Keeling,et al.  Horizontal gene transfer in eukaryotic evolution , 2008, Nature Reviews Genetics.

[330]  A. Ouwehand,et al.  Influence of a combination of Lactobacillus acidophilus NCFM and lactitol on healthy elderly: intestinal and immune parameters. , 2008, The British journal of nutrition.

[331]  M. Ghanim,et al.  Inherited intracellular ecosystem: symbiotic bacteria share bacteriocytes in whiteflies , 2008, The FASEB Journal.

[332]  M. Ohkuma Symbioses of flagellates and prokaryotes in the gut of lower termites. , 2008, Trends in microbiology.

[333]  S. Ekker Zinc finger-based knockout punches for zebrafish genes. , 2008, Zebrafish.

[334]  R. Bibiloni,et al.  Changes in Gut Microbiota Control Metabolic Endotoxemia-Induced Inflammation in High-Fat Diet–Induced Obesity and Diabetes in Mice , 2008, Diabetes.

[335]  R. Colwell,et al.  Dual role colonization factors connecting Vibrio cholerae's lifestyles in human and aquatic environments open new perspectives for combating infectious diseases. , 2008, Current opinion in biotechnology.

[336]  M. Liong Roles of Probiotics and Prebiotics in Colon Cancer Prevention: Postulated Mechanisms and In-vivo Evidence , 2008, International journal of molecular sciences.

[337]  Rick L. Stevens,et al.  Functional metagenomic profiling of nine biomes , 2008, Nature.

[338]  M. Weinbauer,et al.  Global-scale processes with a nanoscale drive: the role of marine viruses , 2008, The ISME Journal.

[339]  J. Xaus,et al.  Is meconium from healthy newborns actually sterile? , 2008, Research in microbiology.

[340]  C. Cardwell,et al.  A meta‐analysis of the association between Caesarean section and childhood asthma , 2008, Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology.

[341]  Xiuzhu Dong,et al.  Endophytic Bacterial Diversity in Rice (Oryza sativa L.) Roots Estimated by 16S rDNA Sequence Analysis , 2008, Microbial Ecology.

[342]  Jörg Meyer,et al.  Role of Intestinal Microbiota in Transformation of Bismuth and Other Metals and Metalloids into Volatile Methyl and Hydride Derivatives in Humans and Mice , 2008, Applied and Environmental Microbiology.

[343]  A. Friedrich,et al.  Deconjugation and degradation of flavonol glycosides by pig cecal microbiota characterized by Fluorescence in situ hybridization (FISH). , 2008, Journal of agricultural and food chemistry.

[344]  A. Douglas Conflict, cheats and the persistence of symbioses. , 2008, The New phytologist.

[345]  R. Rodriguez,et al.  More than 400 million years of evolution and some plants still can't make it on their own: plant stress tolerance via fungal symbiosis. , 2008, Journal of experimental botany.

[346]  D. Mccauley,et al.  Detection of rare paternal chloroplast inheritance in controlled crosses of the endangered sunflower Helianthus verticillatus , 2008, Heredity.

[347]  J. Heimbach,et al.  Executive summary: scientific and regulatory challenges of development of probiotics as foods and drugs. , 2008, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[348]  L. Nicolle Uncomplicated urinary tract infection in adults including uncomplicated pyelonephritis. , 2008, The Urologic clinics of North America.

[349]  M. Hizume,et al.  Wolbachia genome integrated in an insect chromosome: evolution and fate of laterally transferred endosymbiont genes. , 2008, Genome research.

[350]  Yu Chen,et al.  Does Helicobacter pylori protect against asthma and allergy? , 2008, Gut.

[351]  N. Pace,et al.  Gastrointestinal microbiology enters the metagenomics era , 2008, Current opinion in gastroenterology.

[352]  A. Griffin,et al.  The Social Lives of Microbes , 2007 .

[353]  Natalia N. Ivanova,et al.  Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite , 2007, Nature.

[354]  E. Pamer Immune responses to commensal and environmental microbes , 2007, Nature Immunology.

[355]  D. Relman,et al.  An ecological and evolutionary perspective on human–microbe mutualism and disease , 2007, Nature.

[356]  Hiroshi Mori,et al.  Comparative Metagenomics Revealed Commonly Enriched Gene Sets in Human Gut Microbiomes , 2007, DNA research : an international journal for rapid publication of reports on genes and genomes.

[357]  C. Suttle Marine viruses — major players in the global ecosystem , 2007, Nature Reviews Microbiology.

[358]  A. Ejima,et al.  Measurement of Courtship Behavior in Drosophila melanogaster. , 2007, CSH protocols.

[359]  G. O’Hara,et al.  In situ lateral transfer of symbiosis islands results in rapid evolution of diverse competitive strains of mesorhizobia suboptimal in symbiotic nitrogen fixation on the pasture legume Biserrula pelecinus L. , 2007, Environmental microbiology.

[360]  S. Richards,et al.  Widespread Lateral Gene Transfer from Intracellular Bacteria to Multicellular Eukaryotes , 2007, Science.

[361]  A. Letarov,et al.  The Diversity of Coliphages and Coliforms in Horse Feces Reveals a Complex Pattern of Ecological Interactions , 2007, Applied and Environmental Microbiology.

[362]  T. Bosch,et al.  Long-term maintenance of species-specific bacterial microbiota in the basal metazoan Hydra , 2007, Proceedings of the National Academy of Sciences.

[363]  E. Canzi,et al.  Effects of a synbiotic milk product on human intestinal ecosystem , 2007, Journal of applied microbiology.

[364]  Kathryn M. Jones,et al.  How rhizobial symbionts invade plants: the Sinorhizobium–Medicago model , 2007, Nature Reviews Microbiology.

[365]  C. Elia,et al.  Effects of symbiotic preparations on constipated irritable bowel syndrome symptoms. , 2007, Acta bio-medica : Atenei Parmensis.

[366]  C. Queitsch,et al.  A Rhizosphere Fungus Enhances Arabidopsis Thermotolerance through Production of an HSP90 Inhibitor1 , 2007, Plant Physiology.

[367]  S. Abbott,et al.  16S rRNA Gene Sequencing for Bacterial Identification in the Diagnostic Laboratory: Pluses, Perils, and Pitfalls , 2007, Journal of Clinical Microbiology.

[368]  J. Ferrières,et al.  Metabolic Endotoxemia Initiates Obesity and Insulin Resistance , 2007, Diabetes.

[369]  D. Seehofer,et al.  Effect of Enteral Nutrition and Synbiotics on Bacterial Infection Rates After Pylorus-preserving Pancreatoduodenectomy: A Randomized, Double-blind Trial , 2007, Annals of surgery.

[370]  Daniel B. DiGiulio,et al.  Development of the Human Infant Intestinal Microbiota , 2007, PLoS biology.

[371]  N. Patron,et al.  Horizontal transfer of a eukaryotic plastid-targeted protein gene to cyanobacteria , 2007, BMC Biology.

[372]  R. Wilson,et al.  Genomic and metabolic adaptations of Methanobrevibacter smithii to the human gut , 2007, Proceedings of the National Academy of Sciences.

[373]  H. Smidt,et al.  Parenteral long-acting amoxicillin reduces intestinal bacterial community diversity in piglets even 5 weeks after the administration , 2007, The ISME Journal.

[374]  J. Fralick,et al.  Phage Therapy of Pseudomonas aeruginosa Infection in a Mouse Burn Wound Model , 2007, Antimicrobial Agents and Chemotherapy.

[375]  M. Matzke,et al.  Endogenous pararetroviral sequences in tomato (Solanum lycopersicum) and related species , 2007, BMC Plant Biology.

[376]  Eugene Rosenberg,et al.  The role of microorganisms in coral health, disease and evolution , 2007, Nature Reviews Microbiology.

[377]  R. Mackie,et al.  Novel Rumen Bacterial Diversity in Two Geographically Separated Sub-Species of Reindeer , 2007, Microbial Ecology.

[378]  A. Spradling,et al.  Male and Female Drosophila Germline Stem Cells: Two Versions of Immortality , 2007, Science.

[379]  A. Weintraub,et al.  Vibrio cholerae O1 strains are facultative intracellular bacteria, able to survive and multiply symbiotically inside the aquatic free-living amoeba Acanthamoeba castellanii. , 2007, FEMS microbiology ecology.

[380]  T. Hohn,et al.  Distinct expression of endogenous Petunia vein clearing virus and the DNA transposon dTph1 in two Petunia hybrida lines is correlated with differences in histone modification and siRNA production. , 2007, The Plant journal : for cell and molecular biology.

[381]  R. Bud Arrowsmith , 2007, BMJ : British Medical Journal.

[382]  Y. Loya,et al.  Phage therapy of coral disease , 2007, Coral Reefs.

[383]  R. Hughes,et al.  Dietary synbiotics reduce cancer risk factors in polypectomized and colon cancer patients. , 2007, The American journal of clinical nutrition.

[384]  M. J. Harrison,et al.  A Medicago truncatula phosphate transporter indispensable for the arbuscular mycorrhizal symbiosis , 2007, Proceedings of the National Academy of Sciences.

[385]  R. Redman,et al.  A Virus in a Fungus in a Plant: Three-Way Symbiosis Required for Thermal Tolerance , 2007, Science.

[386]  D. Brassart,et al.  Correlation between in vitro and in vivo immunomodulatory properties of lactic acid bacteria. , 2007, World journal of gastroenterology.

[387]  M. Gilmore,et al.  Native Microbial Colonization of Drosophila melanogaster and Its Use as a Model of Enterococcus faecalis Pathogenesis , 2007, Infection and Immunity.

[388]  W. Muir,et al.  Multilevel Selection 1: Quantitative Genetics of Inheritance and Response to Selection , 2007, Genetics.

[389]  G. Hill,et al.  Bacteria as an Agent for Change in Structural Plumage Color: Correlational and Experimental Evidence , 2007, The American Naturalist.

[390]  E. Mardis,et al.  An obesity-associated gut microbiome with increased capacity for energy harvest , 2006, Nature.

[391]  Brigitte Gicquel,et al.  Is Adipose Tissue a Place for Mycobacterium tuberculosis Persistence? , 2006, PloS one.

[392]  M. Nowak Five Rules for the Evolution of Cooperation , 2006, Science.

[393]  Y. Loya,et al.  The coral probiotic hypothesis. , 2006, Environmental microbiology.

[394]  D. Bosscher,et al.  Inulin and oligofructose as prebiotics in the prevention of intestinal infections and diseases , 2006, Nutrition Research Reviews.

[395]  M. Manns,et al.  Hepatitis A virus infection suppresses hepatitis C virus replication and may lead to clearance of HCV. , 2006, Journal of hepatology.

[396]  Å. Krogdahl,et al.  Characterisation of the microbiota associated with intestine of Atlantic cod (Gadus morhua L.): The effect of fish meal, standard soybean meal and a bioprocessed soybean meal , 2006 .

[397]  Jonathan D. G. Jones,et al.  The plant immune system , 2006, Nature.

[398]  Eugene V Koonin,et al.  Evolution of glyoxylate cycle enzymes in Metazoa: evidence of multiple horizontal transfer events and pseudogene formation , 2006, Biology Direct.

[399]  Andrés Moya,et al.  A Small Microbial Genome: The End of a Long Symbiotic Relationship? , 2006, Science.

[400]  Jennifer L. Farmer,et al.  Endogenous retroviruses regulate periimplantation placental growth and differentiation , 2006, Proceedings of the National Academy of Sciences.

[401]  D. Relman,et al.  Assembly of the human intestinal microbiota. , 2006, Trends in ecology & evolution.

[402]  S. Oka,et al.  Early infection of scutellum tissue with Agrobacterium allows high-speed transformation of rice. , 2006, The Plant journal : for cell and molecular biology.

[403]  S. Salminen,et al.  Probiotic bacteria as potential detoxification tools: assessing their heavy metal binding isotherms. , 2006, Canadian journal of microbiology.

[404]  Dietland Müller-Schwarze,et al.  Chemical Ecology of Vertebrates , 2006 .

[405]  O. Koren,et al.  Bacteria Associated with Mucus and Tissues of the Coral Oculina patagonica in Summer and Winter , 2006, Applied and Environmental Microbiology.

[406]  J. Sinclair,et al.  Human cytomegalovirus modulation of CCR5 expression on myeloid cells affects susceptibility to human immunodeficiency virus type 1 infection. , 2006, The Journal of general virology.

[407]  P. A. van den Brandt,et al.  Factors Influencing the Composition of the Intestinal Microbiota in Early Infancy , 2006, Pediatrics.

[408]  A. Griffin,et al.  Social evolution theory for microorganisms , 2006, Nature Reviews Microbiology.

[409]  W. Liesack,et al.  Structure and activity of bacterial community inhabiting rice roots and the rhizosphere. , 2006, Environmental microbiology.

[410]  P. Whorwell,et al.  Efficacy of an Encapsulated Probiotic Bifidobacterium infantis 35624 in Women with Irritable Bowel Syndrome , 2006, The American Journal of Gastroenterology.

[411]  M. Pop,et al.  Metagenomic Analysis of the Human Distal Gut Microbiome , 2006, Science.

[412]  B. Wang,et al.  Phylogenetic distribution and evolution of mycorrhizas in land plants , 2006, Mycorrhiza.

[413]  B. Finlay,et al.  Crossing the Line: Selection and Evolution of Virulence Traits , 2006, PLoS pathogens.

[414]  C. N. Stewart,et al.  Go with the glow: fluorescent proteins to light transgenic organisms. , 2006, Trends in biotechnology.

[415]  P. Horn,et al.  Effect of nursing methods and faeces consumption on the development of the bacteroides, lactobacillus and coliform flora in the caecum of the newborn rabbits. , 2006, Reproduction, nutrition, development.

[416]  E. Tsavkelova,et al.  Microbial producers of plant growth stimulators and their practical use: A review , 2006, Applied Biochemistry and Microbiology.

[417]  R. Ley,et al.  Ecological and Evolutionary Forces Shaping Microbial Diversity in the Human Intestine , 2006, Cell.

[418]  S. Akira,et al.  Pathogen Recognition and Innate Immunity , 2006, Cell.

[419]  S. Faeth,et al.  Search for Hsp90 inhibitors with potential anticancer activity: isolation and SAR studies of radicicol and monocillin I from two plant-associated fungi of the Sonoran desert. , 2006, Journal of natural products.

[420]  J. Doré,et al.  Differences in Fecal Microbiota in Different European Study Populations in Relation to Age, Gender, and Country: a Cross-Sectional Study , 2006, Applied and Environmental Microbiology.

[421]  F. Thompson,et al.  Thalassomonas loyana sp. nov., a causative agent of the white plague-like disease of corals on the Eilat coral reef. , 2006, International journal of systematic and evolutionary microbiology.

[422]  M. W. Taylor,et al.  Marine sponges as microbial fermenters. , 2006, FEMS microbiology ecology.

[423]  J. Schmid,et al.  A Broad Diversity of Volatile Carboxylic Acids, Released by a Bacterial Aminoacylase from Axilla Secretions, as Candidate Molecules for the Determination of Human‐Body Odor Type , 2006, Chemistry & biodiversity.

[424]  D. Gage,et al.  Architecture of Infection Thread Networks in Developing Root Nodules Induced by the Symbiotic Bacterium Sinorhizobium meliloti on Medicago truncatula1[W] , 2005, Plant Physiology.

[425]  Y. Bettarel,et al.  Effects of Viruses and Predators on Prokaryotic Community Composition , 2005, Microbial Ecology.

[426]  M. Gotteland,et al.  Effect of regular ingestion of Saccharomyces boulardii plus inulin or Lactobacillus acidophilus LB in children colonized by Helicobacter pylori , 2005, Acta paediatrica.

[427]  R. Knight,et al.  UniFrac: a New Phylogenetic Method for Comparing Microbial Communities , 2005, Applied and Environmental Microbiology.

[428]  Sridhar Hannenhalli,et al.  Genome-wide analysis of retroviral DNA integration , 2005, Nature Reviews Microbiology.

[429]  M. Fuchs,et al.  TRANSMISSION SPECIFICITY OF PLANT VIRUSES BY VECTORS , 2005 .

[430]  K. Rhee,et al.  Bacterial‐induced Inflammation in Germ‐free Rabbit Appendix , 2005, Inflammatory bowel diseases.

[431]  T. Kudo,et al.  Intra- and Interspecific Comparisons of Bacterial Diversity and Community Structure Support Coevolution of Gut Microbiota and Termite Host , 2005, Applied and Environmental Microbiology.

[432]  B. Bassler,et al.  Quorum sensing: cell-to-cell communication in bacteria. , 2005, Annual review of cell and developmental biology.

[433]  A. Podile,et al.  Biological Control of Late Leaf Spot of Peanut (Arachis hypogaea) with Chitinolytic Bacteria. , 2005, Phytopathology.

[434]  T. Uchiumi,et al.  Suppression of root nodule formation by artificial expression of the TrEnodDR1 (coat protein of White clover cryptic virus 1) gene in Lotus japonicus. , 2005, Molecular plant-microbe interactions : MPMI.

[435]  J. Xaus,et al.  Isolation of Commensal Bacteria from Umbilical Cord Blood of Healthy Neonates Born by Cesarean Section , 2005, Current Microbiology.

[436]  Y. Loya,et al.  Bacterial Strain BA-3 and a filterable factor cause a white plague-like disease in corals from the Eilat coral reef , 2005 .

[437]  Laura S. Frost,et al.  Mobile genetic elements: the agents of open source evolution , 2005, Nature Reviews Microbiology.

[438]  H. Ochman Genomes on the shrink. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[439]  S. Eriksson,et al.  Bacterial genome size reduction by experimental evolution. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[440]  C. Voigt,et al.  BATS, BACTERIA, AND BAT SMELL: SEX-SPECIFIC DIVERSITY OF MICROBES IN A SEXUALLY SELECTED SCENT ORGAN , 2005 .

[441]  F. Bäckhed,et al.  Obesity alters gut microbial ecology. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[442]  S. Efstathiou,et al.  Towards an understanding of the molecular basis of herpes simplex virus latency. , 2005, Virus research.

[443]  G. Ehrlich,et al.  Bacterial plurality as a general mechanism driving persistence in chronic infections. , 2005, Clinical orthopaedics and related research.

[444]  H. Brüssow,et al.  Human Volunteers Receiving Escherichia coli Phage T4 Orally: a Safety Test of Phage Therapy , 2005, Antimicrobial Agents and Chemotherapy.

[445]  Jan Löwe,et al.  Structure of bacterial tubulin BtubA/B: evidence for horizontal gene transfer. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[446]  T. Winzer,et al.  Seven Lotus japonicus Genes Required for Transcriptional Reprogramming of the Root during Fungal and Bacterial Symbiosisw⃞ , 2005, The Plant Cell Online.

[447]  E. Purdom,et al.  Diversity of the Human Intestinal Microbial Flora , 2005, Science.

[448]  A. Esterman,et al.  A synbiotic combination of resistant starch and Bifidobacterium lactis facilitates apoptotic deletion of carcinogen-damaged cells in rat colon. , 2005, The Journal of nutrition.

[449]  Matt Nolan,et al.  Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[450]  A. Ereskovsky,et al.  Morphological evidence for vertical transmission of symbiotic bacteria in the viviparous sponge Halisarca dujardini Johnston (Porifera, Demospongiae, Halisarcida) , 2005 .

[451]  Gary Walsh,et al.  Therapeutic insulins and their large-scale manufacture , 2005, Applied Microbiology and Biotechnology.

[452]  J. Heesemann,et al.  Transcriptional regulation of high pathogenicity island iron uptake genes by YbtA. , 2005, International journal of medical microbiology : IJMM.

[453]  F. Bäckhed,et al.  Host-Bacterial Mutualism in the Human Intestine , 2005, Science.

[454]  D. Sudhakar,et al.  An improvedAgrobacterium-mediated transformation protocol for recalcitrant elite indica rice cultivars , 2005, Plant Molecular Biology Reporter.

[455]  A. Edwards,et al.  Bacteria and Inflammatory Cells in Fetal Membranes Do Not Always Cause Preterm Labor , 2005, Pediatric Research.

[456]  K. Cankar,et al.  Bacterial endophytes from seeds of Norway spruce (Picea abies L. Karst). , 2005, FEMS microbiology letters.

[457]  J. Handelsman,et al.  Introducing DOTUR, a Computer Program for Defining Operational Taxonomic Units and Estimating Species Richness , 2005, Applied and Environmental Microbiology.

[458]  M. Blaser,et al.  Mechanisms of Disease: inflammation and the origins of cancer , 2005, Nature Clinical Practice Oncology.

[459]  Ting Wang,et al.  The gut microbiota as an environmental factor that regulates fat storage. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[460]  J. Bonfield,et al.  Finishing the euchromatic sequence of the human genome , 2004, Nature.

[461]  Y. Bigot,et al.  Commensal and mutualistic relationships of reoviruses with their parasitoid wasp hosts , 2004, Journal of Insect Physiology.

[462]  E. Rosenberg,et al.  The Vibrio shiloi/Oculina patagonica model system of coral bleaching. , 2004, Annual review of microbiology.

[463]  S. V. Nyholm,et al.  The winnowing: establishing the squid–vibrio symbiosis , 2004, Nature Reviews Microbiology.

[464]  C. Boucher,et al.  Lessons learned from the genome analysis of ralstonia solanacearum. , 2004, Annual review of phytopathology.

[465]  L. Ehrman,et al.  Developmental Isolation and Subsequent Adult Behavior of Drosophila paulistorum. VI. Quantitative Variation in Cuticular Hydrocarbons , 2004, Behavior genetics.

[466]  Aristóbolo Mendes Silva,et al.  Effect of Bifidobacterium longum ingestion on experimental salmonellosis in mice , 2004, Journal of applied microbiology.

[467]  Y. Chida,et al.  Postnatal microbial colonization programs the hypothalamic–pituitary–adrenal system for stress response in mice , 2004, The Journal of physiology.

[468]  D. Schluter,et al.  Evidence for ecology's role in speciation , 2004, Nature.

[469]  Ulrich Dobrindt,et al.  Genomic islands in pathogenic and environmental microorganisms , 2004, Nature Reviews Microbiology.

[470]  A. Burt,et al.  Long-term reinfection of the human genome by endogenous retroviruses. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[471]  G. Pérez-Martínez,et al.  Characterization of faecal enterococci from rabbits for the selection of probiotic strains , 2004, Journal of applied microbiology.

[472]  K. Miyanaga,et al.  Toward rational control of Escherichia coli O157:H7 by a phage cocktail , 2004, Applied Microbiology and Biotechnology.

[473]  J. Gordon,et al.  Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[474]  Martin J Blaser,et al.  Bacterial biota in the human distal esophagus , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[475]  J. Xaus,et al.  The commensal microflora of human milk: new perspectives for food bacteriotherapy and probiotics , 2004 .

[476]  Herbert Schmidt,et al.  Pathogenicity Islands in Bacterial Pathogenesis , 2004, Clinical Microbiology Reviews.

[477]  L. M. Van Blerkom Role of viruses in human evolution† , 2003, American journal of physical anthropology.

[478]  D. Coplin,et al.  Quorum sensing in plant-pathogenic bacteria. , 2003, Annual review of phytopathology.

[479]  P. Salamon,et al.  Metagenomic Analyses of an Uncultured Viral Community from Human Feces , 2003, Journal of bacteriology.

[480]  T. Fukatsu,et al.  Transmission of symbiotic bacteria Buchnera to parthenogenetic embryos in the aphid Acyrthosiphon pisum (Hemiptera: Aphidoidea). , 2003, Arthropod structure & development.

[481]  C. Austin,et al.  Microbial pathways leading to steroidal malodour in the axilla , 2003, The Journal of Steroid Biochemistry and Molecular Biology.

[482]  S. Brooks,et al.  Culture-independent phylogenetic analysis of the faecal flora of the rat. , 2003, Canadian journal of microbiology.

[483]  R. Grosberg,et al.  Climate Change, Human Impacts, and the Resilience of Coral Reefs , 2003, Science.

[484]  Robert H. Singer,et al.  Fluorescence in situ hybridization: past, present and future , 2003, Journal of Cell Science.

[485]  V. Kuz’mina,et al.  The Role of Proteinases of the Enteral Microbiota in Temperature Adaptation of Fish and Helminths , 2003, Doklady Biological Sciences.

[486]  I. Smith,et al.  Mycobacterium tuberculosis Pathogenesis and Molecular Determinants of Virulence , 2003, Clinical Microbiology Reviews.

[487]  Elie. Metchnikoff The Prolongation of Life: Optimistic Studies , 2003 .

[488]  G. Gibson,et al.  Probiotics and prebiotics in female health , 2003, The journal of the British Menopause Society.

[489]  R. Tanaka,et al.  Anaerobic dominant flora was reconstructed by synbiotics in an infant with MRSA enteritis , 2003, Pediatrics international : official journal of the Japan Pediatric Society.

[490]  C. Merril,et al.  The prospect for bacteriophage therapy in Western medicine , 2003, Nature Reviews Drug Discovery.

[491]  J. Soule,et al.  The sypA, sypS, and sypC synthetase genes encode twenty-two modules involved in the nonribosomal peptide synthesis of syringopeptin by Pseudomonas syringae pv. syringae B301D. , 2003, Molecular plant-microbe interactions : MPMI.

[492]  S. Kersten,et al.  Nutrigenomics: goals and strategies , 2003, Nature Reviews Genetics.

[493]  S. Lindow,et al.  Microbiology of the Phyllosphere , 2003, Applied and Environmental Microbiology.

[494]  K. Cashman Prebiotics and calcium bioavailability. , 2003, Current issues in intestinal microbiology.

[495]  Yuansha Chen,et al.  Comparative Genomic Analyses of the Vibrio Pathogenicity Island and Cholera Toxin Prophage Regions in Nonepidemic Serogroup Strains of Vibrio cholerae , 2003, Applied and Environmental Microbiology.

[496]  Rainer Merkl,et al.  The genome sequence of Clostridium tetani, the causative agent of tetanus disease , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[497]  P. Heckerling Paternal inheritance of mitochondrial DNA. , 2002 .

[498]  F. Blattner,et al.  Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[499]  Jeffrey I. Gordon,et al.  Developmental regulation of intestinal angiogenesis by indigenous microbes via Paneth cells , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[500]  N. Knowlton,et al.  Diversity and distribution of coral-associated bacteria , 2002 .

[501]  Hidemi Watanabe,et al.  Genome sequence of the endocellular obligate symbiont of tsetse flies, Wigglesworthia glossinidia , 2002, Nature Genetics.

[502]  Rita R. Colwell,et al.  Effects of Global Climate on Infectious Disease: the Cholera Model , 2002, Clinical Microbiology Reviews.

[503]  C. Prinz,et al.  Pathogenesis of Helicobacter pylori infection , 2002, Helicobacter.

[504]  Sabine Cornelsen,et al.  Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[505]  Benjamin Kerr,et al.  Individualist and Multi-level Perspectives on Selection in Structured Populations , 2002 .

[506]  M. Hilleman,et al.  Realities and enigmas of human viral influenza: pathogenesis, epidemiology and control. , 2002, Vaccine.

[507]  J. Diamond Evolution, consequences and future of plant and animal domestication , 2002, Nature.

[508]  Bernard R. Glick,et al.  Role of Pseudomonas putida Indoleacetic Acid in Development of the Host Plant Root System , 2002, Applied and Environmental Microbiology.

[509]  P. Ramteke,et al.  Chromium (VI) biosorption and bioaccumulation by chromate resistant bacteria. , 2002, Chemosphere.

[510]  Y. Loya,et al.  Endolithic algae: an alternative source of photoassimilates during coral bleaching , 2002, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[511]  T. Finan Evolving Insights: Symbiosis Islands and Horizontal Gene Transfer , 2002, Journal of bacteriology.

[512]  Lawrence O. Ticknor,et al.  Empirical and Theoretical Bacterial Diversity in Four Arizona Soils , 2002, Applied and Environmental Microbiology.

[513]  R. Mackie Mutualistic Fermentative Digestion in the Gastrointestinal Tract: Diversity and Evolution1 , 2002, Integrative and comparative biology.

[514]  W. Rice Evolution of sex: Experimental tests of the adaptive significance of sexual recombination , 2002, Nature Reviews Genetics.

[515]  M. Blaser,et al.  Evidence that cagA+Helicobacter pylori strains are disappearing more rapidly than cagA− strains , 2002, Gut.

[516]  G. Bell,et al.  THE ECOLOGY AND GENETICS OF FITNESS IN CHLAMYDOMONAS. VIII. THE DYNAMICS OF ADAPTATION TO NOVEL ENVIRONMENTS AFTER A SINGLE EPISODE OF SEX , 2002, Evolution; international journal of organic evolution.

[517]  B. Dell,et al.  Novel in vivo use of a polyvalent Streptomyces phage to disinfest Streptomyces scabies-infected seed potatoes , 2001 .

[518]  Daniel Schwarzott,et al.  A new fungal phylum, the Glomeromycota: phylogeny and evolution * * Dedicated to Manfred Kluge (Tech , 2001 .

[519]  T. Peregrin The new frontier of nutrition science: nutrigenomics. , 2001, Journal of the American Dietetic Association.

[520]  M. G. Lorenz,et al.  Effects of Bacteriophages on the Population Dynamics of Four Strains of Pelagic Marine Bacteria , 2001, Microbial Ecology.

[521]  M. Manns,et al.  Infection with GB virus C and reduced mortality among HIV-infected patients. , 2001, The New England journal of medicine.

[522]  D. Bignell,et al.  Detritivory, coprophagy, and the evolution of digestive mutualisms in Dictyoptera , 2001, Insectes Sociaux.

[523]  Willem M. de Vos,et al.  The Host Genotype Affects the Bacterial Community in the Human Gastrointestinal Tract , 2001 .

[524]  B. Lugtenberg,et al.  Molecular basis of plant growth promotion and biocontrol by rhizobacteria. , 2001, Current opinion in plant biology.

[525]  M. Breitbart,et al.  Diversity of bacteria associated with the Caribbean coral Montastraea franksi , 2001, Coral Reefs.

[526]  N. A. Whitehead,et al.  Quorum-sensing in Gram-negative bacteria. , 2001, FEMS microbiology reviews.

[527]  C. Landry,et al.  ‘Good genes as heterozygosity’: the major histocompatibility complex and mate choice in Atlantic salmon (Salmo salar) , 2001, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[528]  B. Deplancke,et al.  Microbial modulation of innate defense: goblet cells and the intestinal mucus layer. , 2001, The American journal of clinical nutrition.

[529]  L. Wilkinson Félix d'Herelle and the origins of molecular biology , 2001, Medical History.

[530]  K. Yoshida,et al.  The complete nucleotide sequence of a plant root-inducing (Ri) plasmid indicates its chimeric structure and evolutionary relationship between tumor-inducing (Ti) and symbiotic (Sym) plasmids in Rhizobiaceae. , 2001, Journal of molecular biology.

[531]  J. Gordon,et al.  Molecular analysis of commensal host-microbial relationships in the intestine. , 2001, Science.

[532]  J. Stougaard Regulators and regulation of legume root nodule development. , 2000, Plant physiology.

[533]  S. S. Hirano,et al.  Bacteria in the Leaf Ecosystem with Emphasis onPseudomonas syringae—a Pathogen, Ice Nucleus, and Epiphyte , 2000, Microbiology and Molecular Biology Reviews.

[534]  A. Lapedes,et al.  Timing the ancestor of the HIV-1 pandemic strains. , 2000, Science.

[535]  M. Roberfroid Prebiotics and probiotics: are they functional foods? , 2000, The American journal of clinical nutrition.

[536]  B. Levin,et al.  Compensatory mutations, antibiotic resistance and the population genetics of adaptive evolution in bacteria. , 2000, Genetics.

[537]  S. Lindow,et al.  Role of Leaf Surface Sugars in Colonization of Plants by Bacterial Epiphytes , 2000, Applied and Environmental Microbiology.

[538]  D. Relman,et al.  Bacterial diversity within the human subgingival crevice. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[539]  M. Rumpho,et al.  Annual Viral Expression in a Sea Slug Population: Life Cycle Control and Symbiotic Chloroplast Maintenance. , 1999, The Biological bulletin.

[540]  O. Meijer,et al.  Hugo de Vries on Heredity, 1889-1903: Statistics, Mendelian Laws, Pangenes, Mutations , 1999, Isis.

[541]  R. Mackie,et al.  Developmental microbial ecology of the neonatal gastrointestinal tract. , 1999, The American journal of clinical nutrition.

[542]  S. Siller Foundations of Social Evolution , 1999, Heredity.

[543]  A. J. Moore,et al.  Interacting Phenotypes and the Evolutionary Process. II. Selection Resulting from Social Interactions , 1999, The American Naturalist.

[544]  S. Faruque,et al.  Epidemiology, Genetics, and Ecology of ToxigenicVibrio cholerae , 1998, Microbiology and Molecular Biology Reviews.

[545]  T. Sicheritz-Pontén,et al.  The genome sequence of Rickettsia prowazekii and the origin of mitochondria , 1998, Nature.

[546]  A. Wold The hygiene hypotheslis revised: is the rising frequency of allergy due to changes in the intestinal flora? , 1998, Allergy.

[547]  Martin F. Polz,et al.  Bias in Template-to-Product Ratios in Multitemplate PCR , 1998, Applied and Environmental Microbiology.

[548]  Gerwin C. Raangs,et al.  Variations of Bacterial Populations in Human Feces Measured by Fluorescent In Situ Hybridization with Group-Specific 16S rRNA-Targeted Oligonucleotide Probes , 1998, Applied and Environmental Microbiology.

[549]  B. Barrell,et al.  Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence , 1998, Nature.

[550]  M. Lovell,et al.  Use of Lytic Bacteriophage for Control of Experimental Escherichia coli Septicemia and Meningitis in Chickens and Calves , 1998, Clinical Diagnostic Laboratory Immunology.

[551]  C. Ronson,et al.  Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA gene. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[552]  M. McFall-Ngai,et al.  Induction of a Gradual, Reversible Morphogenesis of Its Host’s Epithelial Brush Border by Vibrio fischeri , 1998, Infection and Immunity.

[553]  B. Brown,et al.  Coral bleaching: causes and consequences , 1997, Coral Reefs.

[554]  C. Goodnight,et al.  Experimental Studies of Group Selection: What Do They Tell US About Group Selection in Nature? , 1997, The American Naturalist.

[555]  Eugene Rosenberg,et al.  Bleaching of the coral Oculina patagonica by Vibrio AK-1 , 1997 .

[556]  R. Möllby,et al.  Starvation increases the number of coliform bacteria in the caecum and induces bacterial adherence to caecal epithelium in rats. , 1997, The European journal of surgery = Acta chirurgica.

[557]  M D Sorenson,et al.  Multiple independent transpositions of mitochondrial DNA control region sequences to the nucleus. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[558]  M. Borodovsky,et al.  cag, a pathogenicity island of Helicobacter pylori, encodes type I-specific and disease-associated virulence factors. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[559]  R. Berg,et al.  The indigenous gastrointestinal microflora. , 1996, Trends in microbiology.

[560]  M. Collins,et al.  Fermentation of non-digestible oligosaccharides by human colonic bacteria , 1996, Proceedings of the Nutrition Society.

[561]  E. Ryan,et al.  Development of a germfree mouse model of Vibrio cholerae infection , 1996, Infection and immunity.

[562]  R. Hardison,et al.  A brief history of hemoglobins: plant, animal, protist, and bacteria. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[563]  E. Mayr What Is a Species, and What Is Not? , 1996, Philosophy of Science.

[564]  B. Levin,et al.  Phage Therapy Revisited: The Population Biology of a Bacterial Infection and Its Treatment with Bacteriophage and Antibiotics , 1996, The American Naturalist.

[565]  B. R. Levin,et al.  The evolution and maintenance of virulence in microparasites. , 1996, Emerging infectious diseases.

[566]  Y. Loya,et al.  Bacterial infection and coral bleaching , 1996, Nature.

[567]  G R Gibson,et al.  Dietary modulation of the human colonic microbiota: introducing the concept of prebiotics. , 1995, The Journal of nutrition.

[568]  T. Taylor,et al.  Four hundred-million-year-old vesicular arbuscular mycorrhizae. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[569]  Yoh Iwasa,et al.  Lattice population dynamics for plants with dispersing seeds and Vegetative propagation , 1994, Researches on Population Ecology.

[570]  Erko Stackebrandt,et al.  Taxonomic Note: A Place for DNA-DNA Reassociation and 16S rRNA Sequence Analysis in the Present Species Definition in Bacteriology , 1994 .

[571]  R. May,et al.  The evolution of virulence in parasites and pathogens: reconciliation between two competing hypotheses. , 1994, Journal of theoretical biology.

[572]  C. Woese There must be a prokaryote somewhere: microbiology's search for itself. , 1994, Microbiological reviews.

[573]  W. Rice,et al.  LABORATORY EXPERIMENTS ON SPECIATION: WHAT HAVE WE LEARNED IN 40 YEARS? , 1993, Evolution; international journal of organic evolution.

[574]  M. Yarmolinsky,et al.  Plasmid addiction genes of bacteriophage P1: doc, which causes cell death on curing of prophage, and phd, which prevents host death when prophage is retained. , 1993, Journal of molecular biology.

[575]  M. Wink,et al.  On the role of opines in plants transformed with Agrobacterium rhizogenes: Tropane alkaloid metabolism, insect-toxicity and allelopathic properties , 1993 .

[576]  W. Summers Cholera and plague in India: the bacteriophage inquiry of 1927-1936. , 1993, Journal of the history of medicine and allied sciences.

[577]  Lynn Margulis,et al.  Symbiosis in Cell Evolution: Microbial Communities in the Archean and Proterozoic Eons , 1992 .

[578]  Jerry A. Coyne,et al.  Genetics and speciation , 1992, Nature.

[579]  M. Collinson,et al.  Fossil evidence of interactions between plants and plant-eating mammals. , 1991, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

[580]  J. Cairns,et al.  Adaptive reversion of a frameshift mutation in Escherichia coli. , 1991, Genetics.

[581]  A. Wilson,et al.  Paternal inheritance of mitochondrial DNA in mice , 1991, Nature.

[582]  E. Delong,et al.  Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing , 1991, Journal of bacteriology.

[583]  J. R. Johnson,et al.  Virulence factors in Escherichia coli urinary tract infection , 1991, Clinical Microbiology Reviews.

[584]  B. Hall,et al.  Spontaneous point mutations that occur more often when advantageous than when neutral. , 1990, Genetics.

[585]  B. Levin,et al.  Selection and evolution of virulence in bacteria: an ecumenical excursion and modest suggestion , 1990, Parasitology.

[586]  Andreas Meyerhans,et al.  Genetic organization of a chimpanzee lentivirus related to HIV-1 , 1990, Nature.

[587]  Prim B. Singh,et al.  Rearing rats in a germ-free environment eliminates their odors of individuality , 1990, Journal of Chemical Ecology.

[588]  F. A. Smith,et al.  Structure and function of the interfaces in biotrophic symbioses as they relate to nutrient transport. , 1990, The New phytologist.

[589]  D. P. Strachan,et al.  Hay fever, hygiene, and household size. , 1989, BMJ.

[590]  S. Crowell‐Davis,et al.  Coprophagy by foals: recognition of maternal feces , 1989 .

[591]  D. Dodd REPRODUCTIVE ISOLATION AS A CONSEQUENCE OF ADAPTIVE DIVERGENCE IN DROSOPHILA PSEUDOOBSCURA , 1989, Evolution; international journal of organic evolution.

[592]  D. Wilson Levels of selection: An alternative to individualism in biology and the human sciences , 1989 .

[593]  M. Nieminen,et al.  Association between dental health and acute myocardial infarction. , 1989, BMJ.

[594]  E. Sober,et al.  Reviving the superorganism. , 1989, Journal of theoretical biology.

[595]  Lansing C. Hoskins,et al.  Degradation of human intestinal glycosphingolipids by extracellular glycosidases from mucin-degrading bacteria of the human fecal flora. , 1988, The Journal of biological chemistry.

[596]  Lawrence G. Wayne International Committee on Systematic Bacteriology: announcement of the report of the ad hoc Committee on Reconciliation of Approaches to Bacterial Systematics. , 1988, Zentralblatt fur Bakteriologie, Mikrobiologie, und Hygiene. Series A, Medical microbiology, infectious diseases, virology, parasitology.

[597]  M. Oldstone Prevention of type I diabetes in nonobese diabetic mice by virus infection. , 1988, Science.

[598]  S. Lindow Competitive Exclusion of Epiphytic Bacteria by Ice−Pseudomonas syringae Mutants , 1987, Applied and environmental microbiology.

[599]  T. Boller,et al.  Rapid changes of heat and desiccation tolerance correlated with changes of trehalose content in Saccharomyces cerevisiae cells subjected to temperature shifts , 1987, FEBS letters.

[600]  M. Shiaris,et al.  Comparative survival of antibiotic-resistant and -sensitive fecal indicator bacteria in estuarine water , 1987, Applied and environmental microbiology.

[601]  K. M. Shaw,et al.  The control of experimental Escherichia coli diarrhoea in calves by means of bacteriophages. , 1987, Journal of general microbiology.

[602]  J. Russell Heat production by ruminal bacteria in continuous culture and its relationship to maintenance energy , 1986, Journal of bacteriology.

[603]  A. Henschen,et al.  Tetanus toxin: primary structure, expression in E. coli, and homology with botulinum toxins. , 1986, The EMBO journal.

[604]  F. Brun-Vézinet,et al.  Isolation of a new human retrovirus from West African patients with AIDS. , 1986, Science.

[605]  N. Juhr,et al.  Intestinal accumulation of urea in germ-free animals - a factor in caecal enlargement , 1986, Laboratory animals.

[606]  J. Erickson,et al.  Variation among human 28S ribosomal RNA genes. , 1985, Proceedings of the National Academy of Sciences of the United States of America.

[607]  P. Falkowski,et al.  Light and the Bioenergetics of a Symbiotic Coral , 1984 .

[608]  B. Marshall,et al.  UNIDENTIFIED CURVED BACILLI IN THE STOMACH OF PATIENTS WITH GASTRITIS AND PEPTIC ULCERATION , 1984, The Lancet.

[609]  F. Twort,et al.  PHAGE THERAPY , 1983, The Lancet.

[610]  B. Marshall,et al.  UNIDENTIFIED CURVED BACILLI ON GASTRIC EPITHELIUM IN ACTIVE CHRONIC GASTRITIS , 1983, The Lancet.

[611]  Frederick M. Ausubel,et al.  Cloning of Rhizobium meliloti nodulation genes by direct complementation of Nod− mutants , 1982, Nature.

[612]  M. Rahat,et al.  Cultivation of bacteria-free Hydra viridis: missing budding factor in nonsymbiotic hydra. , 1982, Science.

[613]  D. Savage,et al.  Transit time of epithelial cells in the small intestines of germfree mice and ex-germfree mice associated with indigenous microorganisms , 1981, Applied and environmental microbiology.

[614]  B. Carter,et al.  Inhibition of adenovirus oncogenicity in hamsters by adeno-associated virus DNA. , 1981, Journal of the National Cancer Institute.

[615]  A. Weismann,et al.  The Germ-Plasm: A Theory of Heredity , 1981 .

[616]  Robert M. May,et al.  The evolution of cooperation , 1981, Science.

[617]  C P Kyriacou,et al.  Circadian rhythm mutations in Drosophila melanogaster affect short-term fluctuations in the male's courtship song. , 1980, Proceedings of the National Academy of Sciences of the United States of America.

[618]  L. Provasoli,et al.  BACTERIA INDUCED POLYMORPHISM IN AN AXENIC LABORATORY STRAIN OF ULVA LACTUCA (CHLOROPHYCEAE) 1 , 1980 .

[619]  P. Davies RESPIRATION IN SOME ATLANTIC REEF CORALS IN RELATION TO VERTICAL DISTRIBUTION AND GROWTH FORM , 1980 .

[620]  A. Purcell,et al.  Pierce's Disease Bacterium: Mechanism of Transmission by Leafhopper Vectors , 1979, Science.

[621]  C. Woese,et al.  Phylogenetic structure of the prokaryotic domain: The primary kingdoms , 1977, Proceedings of the National Academy of Sciences of the United States of America.

[622]  R. Lewontin ‘The Selfish Gene’ , 1977, Nature.

[623]  M. Dworkin,et al.  Cell density-dependent growth of Myxococcus xanthus on casein , 1977, Journal of bacteriology.

[624]  H. Pankratz,et al.  In situ morphology of the gut microbiota of wood-eating termites [Reticulitermes flavipes (Kollar) and Coptotermes formosanus Shiraki] , 1977, Applied and environmental microbiology.

[625]  M. Gorman A mechanism for individual recognition by odour in Herpestes auropunctatus (Carnivora: Viverridae) , 1976, Animal Behaviour.

[626]  B. A. Dehority,et al.  Variation in colony counts of total viable anaerobic rumen bacteria as influenced by media and cultural methods , 1976, Applied and environmental microbiology.

[627]  P. Benson,et al.  Prenatal Diagnosis of Galactosaemia , 1974, British medical journal.

[628]  W. Moore,et al.  Human fecal flora: the normal flora of 20 Japanese-Hawaiians. , 1974, Applied microbiology.

[629]  P. Raven,et al.  ORIGIN OF EUKARYOTIC CELLS , 1971 .

[630]  M. P. Bryant,et al.  Anaerobic Roll Tube Media for Nonselective Enumeration and Isolation of Bacteria in Human Feces , 1971, Applied microbiology.

[631]  W. Modell Population, Species and Evolution , 1971 .

[632]  M. Bakula,et al.  The persistence of a microbial flora during postembryogenesis of Drosophila melanogaster. , 1969, Journal of invertebrate pathology.

[633]  G. Abrams,et al.  Effect of the Normal Microbial Flora on Gastrointestinal Motility.∗ , 1967, Proceedings of the Society for Experimental Biology and Medicine. Society for Experimental Biology and Medicine.

[634]  G. Abrams,et al.  Effect of the Normal Microbial Flora on the Resistance of the Small Intestine to Infection , 1966, Journal of bacteriology.

[635]  D. Lilly,et al.  Probiotics: Growth-Promoting Factors Produced by Microorganisms , 1965, Science.

[636]  W. Dolowy,et al.  Studies of Germfree Animals I. Response of Mice to Infection With Influenza A Virus.∗ , 1964, Proceedings of the Society for Experimental Biology and Medicine. Society for Experimental Biology and Medicine.

[637]  H. Sprinz,et al.  The response of the germfree guinea pig to oral bacterial challenge with Escherichia coli and Shigella flexneri. , 1961, The American journal of pathology.

[638]  H. Sprinz,et al.  Experimental Shigella infections. V. Studies in germ-free guinea pigs. , 1961, Journal of bacteriology.

[639]  M. F. D'Herelle Sur un microbe invisible antagoniste des bacilles dysenteriques , 1961 .

[640]  C. Pigott Genetics and the Origin of Species , 1959, Nature.

[641]  R. Freter The fatal enteric cholera infection in the guinea pig, achieved by inhibition of normal enteric flora. , 1955, The Journal of infectious diseases.

[642]  M. Bohnhoff,et al.  Effect of Streptomycin on Susceptibility of Intestinal Tract to Experimental Salmonella Infection.∗ , 1954, Proceedings of the Society for Experimental Biology and Medicine. Society for Experimental Biology and Medicine.

[643]  M. Huppert,et al.  PATHOGENESIS OF CANDIDA ALBICANS INFECTION FOLLOWING ANTIBIOTIC THERAPY I , 1953, Journal of bacteriology.

[644]  F. D. The Social Insects: their Origin and Evolution , 1928, Nature.

[645]  M. P. Ravenel The Bacteriophage and Its Behavior , 1926 .

[646]  W. J. V. Osterhout,et al.  ON THE DYNAMICS OF PHOTOSYNTHESIS , 1918, The Journal of general physiology.

[647]  William Heinemann The Prolongation of Life , 1906, Nature.

[648]  A. Afkhami Cholera , 1885, British medical journal.

[649]  A. Bennett The Origin of Species by means of Natural Selection; or the Preservation of Favoured Races in the Struggle for Life , 1872, Nature.

[650]  R. Krauss,et al.  Supplemental materials for: Intestinal microbiota metabolism of L-carnitine, a nutrient in red meat, promotes atherosclerosis , 2013 .

[651]  J. A. Moss HIV/AIDS Review. , 2013, Radiologic technology.

[652]  E. Rosenberg,et al.  Variation in Holobionts , 2013 .

[653]  E. Rosenberg,et al.  Microbiotas are Part of Holobiont Fitness , 2013 .

[654]  E. Rosenberg,et al.  Abundance and Diversity of Microbiota , 2013 .

[655]  E. Rosenberg,et al.  Microbiotas are Transmitted Between Holobiont Generations , 2013 .

[656]  E. Rosenberg,et al.  The Evolution of Holobionts , 2013 .

[657]  郭俊男 Probiotics for the Prevention of Clostridium difficle- Associated Diarrhea: A Systematic Review and Meta-analysisi , 2013 .

[658]  A. Brune Microbial Symbioses in the Digestive Tract of Lower Termites , 2012 .

[659]  I. Mizrahi The Role of the Rumen Microbiota in Determining the Feed Efficiency of Dairy Cows , 2012 .

[660]  Y. Bettarel,et al.  Counting viruses in coral mucus , 2012 .

[661]  E. Cytryn,et al.  Microbial Protection Against Plant Disease , 2012 .

[662]  Sharon K. Ahluwalia,et al.  Peripheral Education of the Immune System by Colonic Commensal Microbiota , 2012 .

[663]  D. Bourne,et al.  Intergenerational Transfer of Specific Bacteria in Corals and Possible Implications for Offspring Fitness , 2012, Microbial Ecology.

[664]  L. Hauberg-Lotte,et al.  Functional characteristics of an endophyte community colonizing rice roots as revealed by metagenomic analysis. , 2012, Molecular plant-microbe interactions : MPMI.

[665]  Florent E. Angly,et al.  Phage-bacteria relationships and CRISPR elements revealed by a metagenomic survey of the rumen microbiome. , 2012, Environmental microbiology.

[666]  J. Neu Normal gut microbiota modulates brain development and behavior , 2012 .

[667]  E. Szigethy,et al.  Inflammatory bowel disease. , 2011, Pediatric clinics of North America.

[668]  A. Rodriguez-Mateos,et al.  Prebiotic evaluation of cocoa-derived flavanols in healthy humans by using a randomized, controlled, double-blind, crossover intervention study. , 2011, The American journal of clinical nutrition.

[669]  A. Khoruts,et al.  Therapeutic transplantation of the distal gut microbiota , 2011, Mucosal Immunology.

[670]  G. Gloor,et al.  Microbiota restoration: natural and supplemented recovery of human microbial communities , 2011, Nature Reviews Microbiology.

[671]  E. Mittge,et al.  Evidence for a core gut microbiota in the zebrafish , 2011, The ISME Journal.

[672]  C. Nalepa Altricial Development in Wood-Feeding Cockroaches: The Key Antecedent of Termite Eusociality , 2010 .

[673]  E. Koonin,et al.  New dimensions of the virus world discovered through metagenomics. , 2010, Trends in microbiology.

[674]  H. Virgin,et al.  Herpesvirus latency and symbiotic protection from bacterial infection. , 2009, Viral immunology.

[675]  A. Pélisson,et al.  When Drosophila Meets Retrovirology: The gypsy Case , 2009 .

[676]  Mihai Pop,et al.  Microbiome Metagenomic Analysis of the Human Distal Gut , 2009 .

[677]  D. Watts Scavenging by chimpanzees at Ngogo and the relevance of chimpanzee scavenging to early hominin behavioral ecology. , 2008, Journal of human evolution.

[678]  Graham F Hatfull,et al.  Bacteriophage genomics. , 2008, Current opinion in microbiology.

[679]  M. Bosco,et al.  Enrichment and diversity of plant-probiotic microorganisms in the rhizosphere of hybrid maize during four growth cycles. , 2008 .

[680]  R. Probiotics in man and animals , 2008 .

[681]  M. Devonald,et al.  Current opinion in clinical nutrition and metabolic care. , 2008, Current opinion in clinical nutrition and metabolic care.

[682]  G. Hill,et al.  Do feather-degrading bacteria affect sexually selected plumage color? , 2008, Naturwissenschaften.

[683]  E. Stackebrandt,et al.  Defining Taxonomic Ranks , 2006 .

[684]  J. Hacker,et al.  Co-evolution of bacteria and their hosts: A marriage made in heaven or hell? , 2005 .

[685]  C. Nord,et al.  Development of the faecal anaerobic microflora after Caesarean section and treatment with antibiotics in newborn infants , 2005, Infection.

[686]  E. Jablonka,et al.  Evolution in Four Dimensions: Genetic, Epigenetic, Behavioral, and Symbolic Variation in the History of Life , 2005 .

[687]  R. Buddemeier,et al.  The Adaptive Hypothesis of Bleaching , 2004 .

[688]  S. Andersson,et al.  The evolution of chronic infection strategies in the alpha-proteobacteria. , 2004, Nature reviews. Microbiology.

[689]  J. Shapiro Observations on the formation of clones containing araB-lacZ cistron fusions , 2004, Molecular and General Genetics MGG.

[690]  T. Dobzhansky,et al.  Studies on hybrid sterility , 2004, Zeitschrift für Zellforschung und Mikroskopische Anatomie.

[691]  S. Duncan,et al.  Oxalobacter formigenes and its role in oxalate metabolism in the human gut. , 2004, FEMS microbiology letters.

[692]  K. Miller,et al.  Bacterial Fauna of the Tarsal Tufts of White-tailed Deer (Odocoileus virginianus) , 2003 .

[693]  Lurias,et al.  MUTATIONS OF BACTERIA FROM VIRUS SENSITIVITY TO VIRUS RESISTANCE’-’ , 2003 .

[694]  T. Dobzhansky STUDIES ON HYBRID STERILITY. 11. LOCALIZATION OF STERILITY FACTORS I N DROSOPHILA PSEUDOOBSCURA HYBRIDS , 2003 .

[695]  T. Nakai,et al.  Bacteriophage therapy of infectious diseases in aquaculture. , 2002, Research in microbiology.

[696]  G. Roderick,et al.  Arthropods on islands: colonization, speciation, and conservation. , 2002, Annual review of entomology.

[697]  B. M. Gardener,et al.  Microbial populations responsible for specific soil suppressiveness to plant pathogens. , 2002, Annual review of phytopathology.

[698]  D. Wilkinson Mycorrhizal evolution. , 2001, Trends in ecology & evolution.

[699]  International Human Genome Sequencing Consortium Initial sequencing and analysis of the human genome , 2001, Nature.

[700]  J. Hacker,et al.  Pathogenicity islands and the evolution of microbes. , 2000, Annual review of microbiology.

[701]  O. Hoegh‐Guldberg Climate change, coral bleaching and the future of the world's coral reefs , 1999 .

[702]  B. Lang,et al.  Mitochondrial Evolution , 1999 .

[703]  J. M. Grange,et al.  Zoonotic tuberculosis due to Mycobacterium bovis in developing countries. , 1998, Emerging infectious diseases.

[704]  B. Webb Polydnavirus Biology, Genome Structure, and Evolution , 1998 .

[705]  D. Hopkins,et al.  Fastidious xylem-limited bacterial plant pathogens. , 1996, Annual review of phytopathology.

[706]  F. Maytag Evolution , 1996, Arch. Mus. Informatics.

[707]  W. Engelhardt,et al.  Detoxification of plant and fungal toxins by ruminant microbiota. , 1995 .

[708]  A. Purcell,et al.  Acquisition and retention of Xylella fastidiosa by an efficient vector, Graphocephala atropunctata. , 1995 .

[709]  N. Shashar,et al.  Nitrogen fixation (acetylene reduction) in stony corals: evidence for coral-bacteria interactions , 1994 .

[710]  R. Osawa,et al.  Microbiological studies of the intestinal microflora of the Koala, Phascolarctos cinereus. II. Pap, a special maternal faeces consumed by juvenile koalas , 1993 .

[711]  J. Oliver Formation of Viable but Nonculturable Cells , 1993 .

[712]  T. Curran,et al.  Stimulus-transcription coupling in the nervous system: involvement of the inducible proto-oncogenes fos and jun. , 1991, Annual review of neuroscience.

[713]  S. S. Hirano,et al.  Population Biology and Epidemiology of Pseudomonas Syringae , 1990 .

[714]  田中 博,et al.  Control of tobacco bacterial wilt by an avirulent strain of Pseudomonas solanacearum M4S and its bacteriophage. , 1990 .

[715]  M. Schroth,et al.  Reduction in yield and vigor of grapevine caused by crown gall disease , 1988 .

[716]  Edwin A. Locke,et al.  The virtue of selfishness. , 1988 .

[717]  A. M. James,et al.  Thermal and energetic studies of cellular biological systems , 1987 .

[718]  M. Bugaut Occurrence, absorption and metabolism of short chain fatty acids in the digestive tract of mammals. , 1987, Comparative biochemistry and physiology. B, Comparative biochemistry.

[719]  T. Mitsuoka,et al.  Effect of fructo-oligosaccharides on intestinal microflora. , 1987, Die Nahrung.

[720]  L. Buss,et al.  The evolution of individuality , 1987 .

[721]  N. Pace,et al.  Microbial ecology and evolution: a ribosomal RNA approach. , 1986, Annual review of microbiology.

[722]  G. Reed Food and feed production with microorganisms , 1983 .

[723]  A. Kuroda,et al.  Effects of Administration of TOS and Bifidobacterium breve 4006 on the Human Fecal Flora , 1983 .

[724]  R. Meganathan,et al.  Biosynthesis of vitamin K (menaquinone) in bacteria. , 1982, Microbiological reviews.

[725]  R. Doll,et al.  The causes of cancer: quantitative estimates of avoidable risks of cancer in the United States today. , 1981, Journal of the National Cancer Institute.

[726]  M. Ruse Charles Darwin and group selection. , 1980, Annals of science.

[727]  D. Savage Microbial ecology of the gastrointestinal tract. , 1977, Annual review of microbiology.

[728]  R. W. Burkhardt The inspiration of Lamarck's belief in evolution , 1972, Journal of the history of biology.

[729]  R. W. Bullard,et al.  Problems of body heat loss in water immersion. , 1970, Aerospace medicine.

[730]  V. Wynne-Edwards Animal dispersion in relation to social behaviour , 1962 .

[731]  D. Schluter,et al.  Evidence for Ecological Speciation and Its Alternative , 2022 .

[732]  C. Almqvist,et al.  Birth mode of delivery in the modern delivery ward : indication improves understanding of childhood asthma , 2022 .