Gut microbiota-mediated protection against influenza virus subtype H9N2 in chickens is associated with modulation of the innate responses

[1]  J. Parkinson,et al.  Gut microbiota modulates type I interferon and antibody-mediated immune responses in chickens infected with influenza virus subtype H9N2. , 2018, Beneficial microbes.

[2]  J. Volf,et al.  Gene expression in the chicken caecum is dependent on microbiota composition , 2017, Veterinary Research.

[3]  M. Hattori,et al.  Commensal Lactobacillus Controls Immune Tolerance during Acute Liver Injury in Mice. , 2017, Cell reports.

[4]  Hans H. Cheng,et al.  Differences in CD8αα and cecal microbiome community during proliferation and late cytolytic phases of Marek's disease virus infection are associated with genetic resistance to Marek's disease. , 2016, FEMS microbiology ecology.

[5]  S. Schultz-Cherry,et al.  Modeling human enteric dysbiosis and rotavirus immunity in gnotobiotic pigs , 2016, Gut Pathogens.

[6]  Genming Zhao,et al.  The complexity of human infected AIV H5N6 isolated from China , 2016, BMC Infectious Diseases.

[7]  T. Kubasová,et al.  Composition of Gut Microbiota Influences Resistance of Newly Hatched Chickens to Salmonella Enteritidis Infection , 2016, Front. Microbiol..

[8]  I. Humphreys,et al.  The Role of IL-22 in Viral Infections: Paradigms and Paradoxes , 2016, Front. Immunol..

[9]  W. Ouyang,et al.  Pulmonary Th17 Antifungal Immunity Is Regulated by the Gut Microbiome , 2016, The Journal of Immunology.

[10]  M. Katze,et al.  Effects of Fecal Microbial Transplantation on Microbiome and Immunity in Simian Immunodeficiency Virus-Infected Macaques , 2016, Journal of Virology.

[11]  J. Kolls,et al.  Interleukin-22 Signaling in the Regulation of Intestinal Health and Disease , 2016, Front. Cell Dev. Biol..

[12]  Ondřej Polanský,et al.  Important Metabolic Pathways and Biological Processes Expressed by Chicken Cecal Microbiota , 2015, Applied and Environmental Microbiology.

[13]  T. van der Poll,et al.  The gut microbiota plays a protective role in the host defence against pneumococcal pneumonia , 2015, Gut.

[14]  S. Ehrlich,et al.  Influence of H7N9 virus infection and associated treatment on human gut microbiota , 2015, Scientific Reports.

[15]  D. Welsh,et al.  Regulation of lung immunity and host defense by the intestinal microbiota , 2015, Front. Microbiol..

[16]  S. Sharif,et al.  Reduction of avian influenza virus shedding by administration of Toll-like receptor ligands to chickens. , 2015, Vaccine.

[17]  Hongwei Gao,et al.  Fecal microbiota transplantation and bacterial consortium transplantation have comparable effects on the re-establishment of mucosal barrier function in mice with intestinal dysbiosis , 2015, Front. Microbiol..

[18]  J. Renauld,et al.  Interferon-λ and interleukin-22 cooperate for the induction of interferon-stimulated genes and control of rotavirus infection , 2015, Nature Immunology.

[19]  S. Sharif,et al.  Replication of an H9N2 Avian Influenza Virus and Cytokine Gene Expression in Chickens Exposed by Aerosol or Intranasal Routes , 2015, Avian diseases.

[20]  A. Sher,et al.  Type I interferons in infectious disease , 2015, Nature Reviews Immunology.

[21]  Tadanobu Takahashi,et al.  Consecutive oral administration of Bifidobacterium longum MM‐2 improves the defense system against influenza virus infection by enhancing natural killer cell activity in a murine model , 2015, Microbiology and immunology.

[22]  Baoli Zhu,et al.  Evolution of the H9N2 influenza genotype that facilitated the genesis of the novel H7N9 virus , 2014, Proceedings of the National Academy of Sciences.

[23]  Qunhui Li,et al.  Enzootic genotype S of H9N2 avian influenza viruses donates internal genes to emerging zoonotic influenza viruses in China. , 2014, Veterinary microbiology.

[24]  Hans H. Cheng,et al.  Marek's disease virus influences the core gut microbiome of the chicken during the early and late phases of viral replication. , 2014, FEMS microbiology ecology.

[25]  Helder I Nakaya,et al.  TLR5-mediated sensing of gut microbiota is necessary for antibody responses to seasonal influenza vaccination. , 2014, Immunity.

[26]  Thomas B. Clarke Early Innate Immunity to Bacterial Infection in the Lung Is Regulated Systemically by the Commensal Microbiota via Nod-Like Receptor Ligands , 2014, Infection and Immunity.

[27]  M. Hattori,et al.  Characterization of the 17 strains of regulatory T cell-inducing human-derived Clostridia , 2014, Gut microbes.

[28]  P. Gajer,et al.  An improved dual-indexing approach for multiplexed 16S rRNA gene sequencing on the Illumina MiSeq platform , 2014, Microbiome.

[29]  N. Feng,et al.  Domestic cats and dogs are susceptible to H9N2 avian influenza virus. , 2013, Virus research.

[30]  Masahira Hattori,et al.  Obesity-induced gut microbial metabolite promotes liver cancer through senescence secretome , 2013, Nature.

[31]  Sarah L. Westcott,et al.  Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform , 2013, Applied and Environmental Microbiology.

[32]  Zhenyou Jiang,et al.  Microbiota Regulates the TLR7 Signaling Pathway Against Respiratory Tract Influenza A Virus Infection , 2013, Current Microbiology.

[33]  E. Elinav,et al.  IL-22 Deficiency Alters Colonic Microbiota To Be Transmissible and Colitogenic , 2013, The Journal of Immunology.

[34]  Hualan Chen,et al.  Isolation and characterization of H7N9 viruses from live poultry markets — Implication of the source of current H7N9 infection in humans , 2013 .

[35]  T. Wiele,et al.  Butyrate-producing Clostridium cluster XIVa species specifically colonize mucins in an in vitro gut model , 2012, The ISME Journal.

[36]  R. Dalloul,et al.  Molecular characterization and immunological roles of avian IL-22 and its soluble receptor IL-22 binding protein. , 2012, Cytokine.

[37]  Pelin Yilmaz,et al.  The SILVA ribosomal RNA gene database project: improved data processing and web-based tools , 2012, Nucleic Acids Res..

[38]  E. Wherry,et al.  Commensal bacteria calibrate the activation threshold of innate antiviral immunity. , 2012, Immunity.

[39]  P. Staeheli,et al.  Priming of natural killer cells by nonmucosal mononuclear phagocytes requires instructive signals from commensal microbiota. , 2012, Immunity.

[40]  D. Burt,et al.  Systemic virus distribution and host responses in brain and intestine of chickens infected with low pathogenic or high pathogenic avian influenza virus , 2012, Virology Journal.

[41]  Nan Yan,et al.  Intrinsic antiviral immunity , 2012, Nature Immunology.

[42]  M. Teixeira,et al.  Transient TLR Activation Restores Inflammatory Response and Ability To Control Pulmonary Bacterial Infection in Germfree Mice , 2012, The Journal of Immunology.

[43]  S. Sharif,et al.  In vivo administration of ligands for chicken toll-like receptors 4 and 21 induces the expression of immune system genes in the spleen. , 2011, Veterinary immunology and immunopathology.

[44]  C. Huttenhower,et al.  Metagenomic biomarker discovery and explanation , 2011, Genome Biology.

[45]  Rob Knight,et al.  UCHIME improves sensitivity and speed of chimera detection , 2011, Bioinform..

[46]  A. Iwasaki,et al.  Microbiota regulates immune defense against respiratory tract influenza A virus infection , 2011, Proceedings of the National Academy of Sciences.

[47]  R. Kulkarni,et al.  Synthetic double-stranded RNA oligonucleotides are immunostimulatory for chicken spleen cells , 2010, Developmental & Comparative Immunology.

[48]  S. Sharif,et al.  Effects of Lactobacilli on Cytokine Expression by Chicken Spleen and Cecal Tonsil Cells , 2010, Clinical and Vaccine Immunology.

[49]  N. Maeda,et al.  Oral administration of heat-killed Lactobacillus plantarum L-137 enhances protection against influenza virus infection by stimulation of type I interferon production in mice. , 2009, International immunopharmacology.

[50]  O. Mandelboim,et al.  Microbial flora drives interleukin 22 production in intestinal NKp46+ cells that provide innate mucosal immune defense. , 2008, Immunity.

[51]  R. Webby,et al.  Replication and Transmission of H9N2 Influenza Viruses in Ferrets: Evaluation of Pandemic Potential , 2008, PloS one.

[52]  L. Saif,et al.  Virus-specific intestinal IFN-gamma producing T cell responses induced by human rotavirus infection and vaccines are correlated with protection against rotavirus diarrhea in gnotobiotic pigs. , 2008, Vaccine.

[53]  S. Sa,et al.  Interleukin-22 mediates early host defense against attaching and effacing bacterial pathogens , 2008, Nature Medicine.

[54]  R. Silverman Viral Encounters with 2′,5′-Oligoadenylate Synthetase and RNase L during the Interferon Antiviral Response , 2007, Journal of Virology.

[55]  I. Capua,et al.  Avian influenza: recent developments , 2004, Avian pathology : journal of the W.V.P.A.

[56]  K Cameron,et al.  Avian-to-human transmission of H9N2 subtype influenza A viruses: relationship between H9N2 and H5N1 human isolates. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[57]  P. Meier,et al.  Bile acids modulate the interferon signalling pathway , 1999, Hepatology.

[58]  J. Parkinson,et al.  Influenza A virus subtype H9N2 infection disrupts the composition of intestinal microbiota of chickens. , 2018, FEMS microbiology ecology.

[59]  Y. Guan,et al.  Avian-to-human transmission of H 9 N 2 subtype influenza A viruses : Relationship between H 9 N 2 and H 5 N 1 human isolates , 2000 .

[60]  Y. Benjamini,et al.  Controlling the false discovery rate: a practical and powerful approach to multiple testing , 1995 .

[61]  J. Campbell Paradigms and paradoxes , 1980 .