Cryptic introgression: evidence that selection and plasticity mask the full phenotypic potential of domesticated Atlantic salmon in the wild

[1]  K. Glover,et al.  Judging a salmon by its spots: environmental variation is the primary determinant of spot patterns in Salmo salar , 2018, BMC Ecology.

[2]  H. Araki,et al.  Modeling fitness changes in wild Atlantic salmon populations faced by spawning intrusion of domesticated escapees , 2018, Evolutionary applications.

[3]  N. Jeffery,et al.  Predicting the impacts of escaped farmed Atlantic salmon on wild salmon populations , 2018 .

[4]  Mark W. Coulson,et al.  Half a century of genetic interaction between farmed and wild Atlantic salmon: Status of knowledge and unanswered questions , 2017 .

[5]  K. Glover,et al.  Timing is everything: Fishing‐season placement may represent the most important angling‐induced evolutionary pressure on Atlantic salmon populations , 2017, Ecology and evolution.

[6]  B. Jonsson,et al.  Maternal inheritance influences homing and growth of hybrid offspring between wild and farmed Atlantic salmon , 2017 .

[7]  K. Glover,et al.  Ploidy elicits a whole-genome dosage effect: growth of triploid Atlantic salmon is linked to the genetic origin of the second maternal chromosome set , 2017, BMC Genetics.

[8]  G. Robertsen,et al.  Gene flow from domesticated escapes alters the life history of wild Atlantic salmon , 2017, Nature Ecology &Evolution.

[9]  Martin I. Taylor,et al.  Plasticity in growth of farmed and wild Atlantic salmon: is the increased growth rate of farmed salmon caused by evolutionary adaptations to the commercial diet? , 2016, BMC Evolutionary Biology.

[10]  K. Hindar,et al.  Widespread genetic introgression of escaped farmed Atlantic salmon in wild salmon populations , 2016 .

[11]  E. Verspoor,et al.  Assessment of interbreeding and introgression of farm genes into a small Scottish Atlantic salmon Salmo salar stock: ad hoc samples - ad hoc results? , 2016, Journal of fish biology.

[12]  M. Ozerov,et al.  Genes that affect Atlantic salmon growth in hatchery do not have the same effect in the wild , 2016 .

[13]  G. Carvalho,et al.  Plasticity in response to feed availability: Does feeding regime influence the relative growth performance of domesticated, wild and hybrid Atlantic salmon Salmo salar parr? , 2016, Journal of fish biology.

[14]  Martin I. Taylor,et al.  Does density influence relative growth performance of farm, wild and F1 hybrid Atlantic salmon in semi-natural and hatchery common garden conditions? , 2016, Royal Society Open Science.

[15]  K. Glover,et al.  Thermal plasticity in farmed, wild and hybrid Atlantic salmon during early development: has domestication caused divergence in low temperature tolerance? , 2016, BMC Evolutionary Biology.

[16]  Martin I. Taylor,et al.  A common garden design reveals population‐specific variability in potential impacts of hybridization between populations of farmed and wild Atlantic salmon, Salmo salar L. , 2016, Evolutionary applications.

[17]  K. Gharbi,et al.  Genome wide association and genomic prediction for growth traits in juvenile farmed Atlantic salmon using a high density SNP array , 2015, BMC Genomics.

[18]  R. Houston,et al.  The genetic architecture of growth and fillet traits in farmed Atlantic salmon (Salmo salar) , 2015, BMC Genetics.

[19]  P. Bacon,et al.  Can Conservation Stocking Enhance Juvenile Emigrant Production in Wild Atlantic Salmon , 2015 .

[20]  P. McGinnity,et al.  Quantifying heritable variation in fitness-related traits of wild, farmed and hybrid Atlantic salmon families in a wild river environment , 2015, Heredity.

[21]  F Besnier,et al.  Identification of quantitative genetic components of fitness variation in farmed, hybrid and native salmon in the wild , 2015, Heredity.

[22]  F. Nilsen,et al.  Hatching Time and Alevin Growth Prior to the Onset of Exogenous Feeding in Farmed, Wild and Hybrid Norwegian Atlantic Salmon , 2014, PloS one.

[23]  M. Oyarzún,et al.  Genetic co-variation between resistance against both Caligus rogercresseyi and Piscirickettsia salmonis, and body weight in Atlantic salmon (Salmo salar) , 2014 .

[24]  D. Bates,et al.  Fitting Linear Mixed-Effects Models Using lme4 , 2014, 1406.5823.

[25]  P. Fontaine,et al.  Levels of domestication in fish: implications for the sustainable future of aquaculture , 2014 .

[26]  K. Glover,et al.  Microsatellite DNA used for parentage identification of partly digested Atlantic salmon (Salmo salar) juveniles through non-destructive diet sampling in salmonids , 2014 .

[27]  D. Fraser,et al.  The Between-Population Genetic Architecture of Growth, Maturation, and Plasticity in Atlantic Salmon , 2014, Genetics.

[28]  F. Nilsen,et al.  Growth reaction norms of domesticated, wild and hybrid Atlantic salmon families in response to differing social and physical environments , 2013, BMC Evolutionary Biology.

[29]  K. Glover,et al.  Atlantic salmon populations invaded by farmed escapees: quantifying genetic introgression with a Bayesian approach and SNPs , 2013, BMC Genetics.

[30]  F. Nilsen,et al.  Does Domestication Cause Changes in Growth Reaction Norms? A Study of Farmed, Wild and Hybrid Atlantic Salmon Families Exposed to Environmental Stress , 2013, PloS one.

[31]  K. Glover,et al.  Performance of farmed, hybrid, and wild Atlantic salmon (Salmo salar) families in a natural river environment , 2012 .

[32]  K. Glover,et al.  Three Decades of Farmed Escapees in the Wild: A Spatio-Temporal Analysis of Atlantic Salmon Population Genetic Structure throughout Norway , 2012, PloS one.

[33]  L. Bernatchez,et al.  Temporal change in genetic integrity suggests loss of local adaptation in a wild Atlantic salmon (Salmo salar) population following introgression by farmed escapees , 2011, Heredity.

[34]  D. I. Våge,et al.  Mapping of quantitative trait loci for flesh colour and growth traits in Atlantic salmon (Salmo salar) , 2010, Genetics Selection Evolution.

[35]  A. L. Houde,et al.  Reduced anti-predator responses in multi-generational hybrids of farmed and wild Atlantic salmon (Salmo salar L.) , 2010, Conservation Genetics.

[36]  T. Gjedrem The first family‐based breeding program in aquaculture , 2010 .

[37]  S. Einum,et al.  Growth enhanced brown trout show increased movement activity in the wild , 2009 .

[38]  E. Slinde,et al.  A comparison of farmed, wild and hybrid Atlantic salmon (Salmo salar L.) reared under farming conditions , 2009 .

[39]  S. Brotherstone,et al.  Genetic parameters of production traits in Atlantic salmon (Salmo salar) , 2008 .

[40]  L. Sundström,et al.  GROWTH AND SURVIVAL TRADE-OFFS AND OUTBREEDING DEPRESSION IN RAINBOW TROUT (ONCORHYNCHUS MYKISS) , 2007, Evolution; international journal of organic evolution.

[41]  J. Taggart FAP: an exclusion-based parental assignment program with enhanced predictive functions: PROGRAM NOTE , 2006 .

[42]  M. Abrahams,et al.  Behavioural trade-offs between growth and mortality explain evolution of submaximal growth rates. , 2006, The Journal of animal ecology.

[43]  M. Abrahams,et al.  Predators select against high growth rates and risk–taking behaviour in domestic trout populations , 2004, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[44]  J. Taggart,et al.  Fitness reduction and potential extinction of wild populations of Atlantic salmon, Salmo salar, as a result of interactions with escaped farm salmon , 2003, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[45]  I. Fleming,et al.  Lifetime success and interactions of farm salmon invading a native population , 2000, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[46]  Nina Jonsson,et al.  The relative role of density‐dependent and density‐independent survival in the life cycle of Atlantic salmon Salmo salar , 1998 .

[47]  B. Jonsson,et al.  Long-term study of the ecology of wild Atlantic salmon smolts in a small Norwegian river , 1998 .

[48]  P. McGinnity,et al.  Genetic changes in Atlantic salmon (Salmo salar) populations of Northwest Irish rivers resulting from escapes of adult farm salmon , 1998 .

[49]  S. Einum,et al.  Experimental tests of genetic divergence of farmed from wild Atlantic salmon due to domestication , 1997 .

[50]  J. Taggart,et al.  Genetic impact of escaped farmed Atlantic salmon (Salmo salar L.) on native populations: use of DNA profiling to assess freshwater performance of wild, farmed, and hybrid progeny in a natural river environment , 1997 .

[51]  G. W. Friars,et al.  Applications of selection for multiple traits in cage-reared Atlantic salmon (Salmo salar) , 1995 .

[52]  W. Crozier Evidence of genetic interaction between escaped farmed salmon and wild Atlantic salmon (Salmo salar L.) in a Northern Irish river , 1993 .

[53]  R. A. Lund,et al.  Identification of wild and reared Atlantic salmon, Salmo salar L., using scale characters , 1991 .

[54]  B. Gjerde,et al.  Genetic origin of Norwegian farmed Atlantic salmon , 1991 .

[55]  E. M. P. Chadwick,et al.  Stock-Recruitment Relationship for Atlantic Salmon (Salmo salar) in Newfoundland Rivers , 1982 .

[56]  K. Glover,et al.  Are farmed salmon more prone to risk than wild salmon? Susceptibility of juvenile farm, hybrid and wild Atlantic salmon Salmo salar L. to an artificial predator , 2015 .

[57]  M. Heino,et al.  Using simulated escape events to assess the annual numbers and destinies of escaped farmed Atlantic salmon of different life stages from farm sites in Norway , 2015 .

[58]  R Core Team,et al.  R: A language and environment for statistical computing. , 2014 .

[59]  Richard S. Taylor,et al.  Genetic variation of resistance to amoebic gill disease in Atlantic salmon (Salmo salar) assessed in a challenge system , 2007 .

[60]  K. Glover,et al.  Evidence of temporal genetic change in wild Atlantic salmon, Salmo salar L., populations affected by farm escapees , 2006 .

[61]  Trygve Gjedrem,et al.  Genetic improvement of cold‐water fish species , 2000 .

[62]  R. G. Buck,et al.  The relation between stock size and progeny of Atlantic salmon, Salmo salar L., in a Scottish stream , 1984 .