Engineering Transcriptional Regulator Effector Specificity Using Computational Design and In Vitro Rapid Prototyping: Developing a Vanillin Sensor.
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Joseph T. Meyerowitz | Stephen L Mayo | Richard M Murray | Joseph T Meyerowitz | S. L. Mayo | R. Murray | Emmanuel L C de los Santos | E. L. C. de los Santos
[1] Charlie E M Strauss,et al. Rosetta comparative modeling for library design: Engineering alternative inducer specificity in a transcription factor , 2015, Proteins.
[2] Stephen L. Mayo,et al. An efficient algorithm for multistate protein design based on FASTER , 2010, J. Comput. Chem..
[3] Mikhail S. Gelfand,et al. Engineering transcription factors with novel DNA-binding specificity using comparative genomics , 2009, Nucleic acids research.
[4] Zachary Z. Sun,et al. Characterizing and prototyping genetic networks with cell-free transcription-translation reactions. , 2015, Methods.
[5] D. Baker,et al. Design of a Novel Globular Protein Fold with Atomic-Level Accuracy , 2003, Science.
[6] R. Murray,et al. Gene circuit performance characterization and resource usage in a cell-free "breadboard". , 2014, ACS synthetic biology.
[7] J. Collins,et al. Construction of a genetic toggle switch in Escherichia coli , 2000, Nature.
[8] Raquel Tobes,et al. The TetR Family of Transcriptional Repressors , 2005, Microbiology and Molecular Biology Reviews.
[9] M. Schumacher,et al. Structural Mechanisms of QacR Induction and Multidrug Recognition , 2001, Science.
[10] Richard M. Murray,et al. Protocols for Implementing an Escherichia coli Based TX-TL Cell-Free Expression System for Synthetic Biology , 2013, Journal of visualized experiments : JoVE.
[11] M. Elowitz,et al. A synthetic oscillatory network of transcriptional regulators , 2000, Nature.
[12] M. Schumacher,et al. A Single Acidic Residue Can Guide Binding Site Selection but Does Not Govern QacR Cationic-Drug Affinity , 2011, PloS one.
[13] Jing Zhang,et al. Jaguar: A high-performance quantum chemistry software program with strengths in life and materials sciences , 2013 .
[14] Stephen L. Mayo,et al. Dramatic performance enhancements for the FASTER optimization algorithm , 2006, J. Comput. Chem..
[15] H. Bujard,et al. Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I1-I2 regulatory elements. , 1997, Nucleic acids research.
[16] Priscilla E. M. Purnick,et al. The second wave of synthetic biology: from modules to systems , 2009, Nature Reviews Molecular Cell Biology.
[17] Steve Grkovic,et al. Interactions of the QacR multidrug-binding protein with structurally diverse ligands: implications for the evolution of the binding pocket. , 2003, Biochemistry.
[18] M. Schumacher,et al. Deciphering the molecular basis of multidrug recognition: crystal structures of the Staphylococcus aureus multidrug binding transcription regulator QacR. , 2003, Research in microbiology.
[19] B. Ahring,et al. Inhibition of ethanol-producing yeast and bacteria by degradation products produced during pre-treatment of biomass , 2004, Applied Microbiology and Biotechnology.
[20] Benjamin D Allen,et al. Combinatorial methods for small-molecule placement in computational enzyme design , 2006, Proceedings of the National Academy of Sciences.
[21] Vincent Noireaux,et al. Linear DNA for rapid prototyping of synthetic biological circuits in an Escherichia coli based TX-TL cell-free system. , 2014, ACS synthetic biology.
[22] V. de Lorenzo,et al. Transcriptional regulators à la carte: engineering new effector specificities in bacterial regulatory proteins. , 2006, Current opinion in biotechnology.
[23] Ron Weiss,et al. Systematic Transfer of Prokaryotic Sensors and Circuits to Mammalian Cells , 2014, ACS synthetic biology.