Aberrant DNA Methylation of CDH1, p16 and DAPK in Childhood Acute Lymphoblastic Leukemia

Results: CDH1 was methylated in 26 (60.4%) patients, p16 in two (4.6%) patients and DAPK in six (13.9%) patients at the time of diagnosis. Twenty nine (67.4%) patients had methylation of at least one gene. None of the healthy BM donors showed methylation of the above genes. Age was the only factor which showed significant association with the presence of DNA methylation (P=0.03). None of the other clinicopathological factors showed association with initial methylation status. At the time of morphologic CR, all patients who had aberrant DNA methylation at the time of diagnosis had no detectable residual methylation.

[1]  Hua-rong Zhou,et al.  CpG island methylator phenotype and its relationship with prognosis in adult acute leukemia patients , 2014, Hematology.

[2]  S. Duan,et al.  The Diagnostic Value of DNA Methylation in Leukemia: A Systematic Review and Meta-Analysis , 2014, PloS one.

[3]  Christofer L. Bäcklin,et al.  Genome-wide signatures of differential DNA methylation in pediatric acute lymphoblastic leukemia , 2013, Genome Biology.

[4]  M. Schrappe,et al.  Clinical significance of aberrant DNA methylation in childhood acute lymphoblastic leukemia. , 2011, Leukemia research.

[5]  M. Voso,et al.  Promoter methylation of DAPK1, E-cadherin and thrombospondin-1 in de novo and therapy-related myeloid neoplasms. , 2010, Blood cells, molecules & diseases.

[6]  G. Rosner,et al.  Residual DNA methylation at remission is prognostic in adult Philadelphia chromosome-negative acute lymphocytic leukemia. , 2009, Blood.

[7]  Peter A. Jones,et al.  The Epigenomics of Cancer , 2007, Cell.

[8]  S. Koschmieder,et al.  DNA methylation of tumor suppressor genes in clinical remission predicts the relapse risk in acute myeloid leukemia. , 2007, Cancer research.

[9]  S. Armstrong,et al.  Silencing of the tumor suppressor gene FHIT is highly characteristic for MLL gene rearranged infant acute lymphoblastic leukemia , 2006, Leukemia.

[10]  J. Issa,et al.  Aberrant DNA methylation of a cell cycle regulatory pathway composed of P73, P15 and P57KIP2 is a rare event in children with acute lymphocytic leukemia. , 2005, Leukemia research.

[11]  Luoping Zhang,et al.  Hypermethylation of the 5′ CpG Island of the FHIT Gene Is Associated with Hyperdiploid and Translocation-Negative Subtypes of Pediatric Leukemia , 2004, Cancer Research.

[12]  J. Herman,et al.  Gene silencing in cancer in association with promoter hypermethylation. , 2003, The New England journal of medicine.

[13]  K. Bhatia,et al.  Concurrent methylation of multiple genes in childhood ALL: Correlation with phenotype and molecular subgroup , 2003, Leukemia.

[14]  J. Issa,et al.  Aberrant DNA methylation in pediatric patients with acute lymphocytic leukemia , 2003, Cancer.

[15]  Terry L. Smith,et al.  DNA methylation of multiple promoter-associated CpG islands in adult acute lymphocytic leukemia. , 2002, Clinical cancer research : an official journal of the American Association for Cancer Research.

[16]  J. Issa,et al.  DNA methylation patterns at relapse in adult acute lymphocytic leukemia. , 2002, Clinical cancer research : an official journal of the American Association for Cancer Research.

[17]  Peter A. Jones,et al.  The fundamental role of epigenetic events in cancer , 2002, Nature Reviews Genetics.

[18]  A. Wolffe,et al.  DNA methylation in health and disease , 2000, Nature Reviews Genetics.

[19]  S. Clark,et al.  Hypermethylation of E-cadherin in leukemia. , 2000, Blood.

[20]  D. Campana,et al.  New definition of remission in childhood acute lymphoblastic leukemia , 2000, Leukemia.

[21]  I. Wong,et al.  Aberrant p15 promoter methylation in adult and childhood acute leukemias of nearly all morphologic subtypes: potential prognostic implications. , 2000, Blood.

[22]  M. Caligiuri,et al.  Aberrant CpG-island methylation has non-random and tumour-type–specific patterns , 2000, Nature Genetics.

[23]  C. Bartram,et al.  Loss of p73 gene expression in leukemias/lymphomas due to hypermethylation. , 1999, Blood.

[24]  J. Herman,et al.  Transcriptional silencing of the p73 gene in acute lymphoblastic leukemia and Burkitt's lymphoma is associated with 5' CpG island methylation. , 1999, Cancer research.

[25]  J. Magaud,et al.  Hypermethylation of calcitonin gene in adult acute leukemia at diagnosis and during complete remission. , 1999, Hematology and cell therapy.

[26]  M. Iravani,et al.  Methylation of the multi tumor suppressor gene-2 (MTS2, CDKN1, p15INK4B) in childhood acute lymphoblastic leukemia , 1997, Oncogene.

[27]  L. V. D. Heuvel,et al.  DNA methylation patterns in the calcitonin gene region at first diagnosis and at relapse of acute lymphoblastic leukemia (ALL) , 1997, Leukemia.

[28]  M. Link,et al.  Frequent and selective methylation of p15 and deletion of both p15 and p16 in T-cell acute lymphoblastic leukemia. , 1997, Cancer research.

[29]  J. Herman,et al.  Distinct patterns of inactivation of p15INK4B and p16INK4A characterize the major types of hematological malignancies. , 1997, Cancer research.

[30]  J. Herman,et al.  Methylation-specific PCR: a novel PCR assay for methylation status of CpG islands. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[31]  D. Huhn,et al.  Detection of DNA methylation in the calcitonin gene in human leukemias using differential polymerase chain reaction. , 1995, Leukemia.

[32]  H. Kantarjian,et al.  Epigenetics of acute lymphocytic leukemia. , 2009, Seminars in hematology.

[33]  A. Bird DNA methylation patterns and epigenetic memory. , 2002, Genes & development.

[34]  K. Goi,et al.  p16/MTS1/INK4A gene is frequently inactivated by hypermethylation in childhood acute lymphoblastic leukemia with 11q23 translocation , 1999, Leukemia.

[35]  C. Pui,et al.  Uniform approach to risk classification and treatment assignment for children with acute lymphoblastic leukemia. , 1996, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.

[36]  S. Baylin,et al.  Methylation of the oestrogen receptor CpG island links ageing and neoplasia in human colon , 1994, Nature Genetics.