Mre11 Assembles Linear DNA Fragments into DNA Damage Signaling Complexes

Mre11/Rad50/Nbs1 complex (MRN) is essential to suppress the generation of double-strand breaks (DSBs) during DNA replication. MRN also plays a role in the response to DSBs created by DNA damage. Hypomorphic mutations in Mre11 (which causes an ataxia-telangiectasia-like disease [ATLD]) and mutations in the ataxia-telangiectasia-mutated (ATM) gene lead to defects in handling damaged DNA and to similar clinical and cellular phenotypes. Using Xenopus egg extracts, we have designed a simple assay to define the biochemistry of Mre11. MRN is required for efficient activation of the DNA damage response induced by DSBs. We isolated a high molecular weight DNA damage signaling complex that includes MRN, damaged DNA molecules, and activated ATM. Complex formation is partially dependent upon Zn2+ and requires an intact Mre11 C-terminal domain that is deleted in some ATLD patients. The ATLD truncation can still perform the role of Mre11 during replication. Our work demonstrates the role of Mre11 in assembling DNA damage signaling centers that are reminiscent of irradiation-induced foci. It also provides a molecular explanation for the similarities between ataxia-telangiectasia (A-T) and ATLD.

[1]  J. Aten,et al.  Dynamics of DNA Double-Strand Breaks Revealed by Clustering of Damaged Chromosome Domains , 2004, Science.

[2]  C. Lilley,et al.  The Mre11 complex is required for ATM activation and the G2/M checkpoint , 2003, The EMBO journal.

[3]  T. Halazonetis,et al.  53BP1 and NFBD1/MDC1-Nbs1 function in parallel interacting pathways activating ataxia-telangiectasia mutated (ATM) in response to DNA damage. , 2003, Cancer research.

[4]  F. Alt,et al.  Checkpoint failure and chromosomal instability without lymphomagenesis in Mre11(ATLD1/ATLD1) mice. , 2003, Molecular cell.

[5]  Michaela R. Hoffmeyer,et al.  Regulation of Mre11/Rad50 by Nbs1 , 2003, Journal of Biological Chemistry.

[6]  Yair Andegeko,et al.  Requirement of the MRN complex for ATM activation by DNA damage , 2003, The EMBO journal.

[7]  P. Karran,et al.  Vanillins--a novel family of DNA-PK inhibitors. , 2003, Nucleic acids research.

[8]  R. T. Bree,et al.  The MRN complex: coordinating and mediating the response to broken chromosomes , 2003, EMBO reports.

[9]  J. Petrini,et al.  The cellular response to DNA double-strand breaks: defining the sensors and mediators. , 2003, Trends in cell biology.

[10]  Stephen J. Elledge,et al.  Sensing DNA Damage Through ATRIP Recognition of RPA-ssDNA Complexes , 2003, Science.

[11]  J. Bartek,et al.  Distinct spatiotemporal dynamics of mammalian checkpoint regulators induced by DNA damage , 2003, Nature Cell Biology.

[12]  J. Bartek,et al.  MDC1 is required for the intra-S-phase DNA damage checkpoint , 2003, Nature.

[13]  Stephen J. Elledge,et al.  MDC1 is a mediator of the mammalian DNA damage checkpoint , 2003, Nature.

[14]  M. Kastan,et al.  DNA damage activates ATM through intermolecular autophosphorylation and dimer dissociation , 2003, Nature.

[15]  J. Gautier,et al.  An ATR- and Cdc7-dependent DNA damage checkpoint that inhibits initiation of DNA replication. , 2003, Molecular cell.

[16]  J. Petrini,et al.  DNA replication-dependent nuclear dynamics of the Mre11 complex. , 2003, Molecular cancer research : MCR.

[17]  L. Symington Role of RAD52 Epistasis Group Genes in Homologous Recombination and Double-Strand Break Repair , 2002, Microbiology and Molecular Biology Reviews.

[18]  A. Taylor,et al.  Specific Recruitment of Human Cohesin to Laser-induced DNA Damage* , 2002, The Journal of Biological Chemistry.

[19]  Shunichi Takeda,et al.  Nbs1 is essential for DNA repair by homologous recombination in higher vertebrate cells , 2002, Nature.

[20]  J. Tainer,et al.  The Rad50 zinc-hook is a structure joining Mre11 complexes in DNA recombination and repair , 2002, Nature.

[21]  S. Jackson,et al.  The MRE11 complex: at the crossroads of DNA repair and checkpoint signalling , 2002, Nature Reviews Molecular Cell Biology.

[22]  Junjie Chen,et al.  Histone H2AX Is Phosphorylated in an ATR-dependent Manner in Response to Replicational Stress* , 2001, The Journal of Biological Chemistry.

[23]  C. Dekker,et al.  Human Rad50/Mre11 is a flexible complex that can tether DNA ends. , 2001, Molecular cell.

[24]  Michael M. Murphy,et al.  ATM Phosphorylates Histone H2AX in Response to DNA Double-strand Breaks* , 2001, The Journal of Biological Chemistry.

[25]  Y. Shiloh,et al.  Nuclear retention of ATM at sites of DNA double strand breaks. , 2001, The Journal of biological chemistry.

[26]  P. Sung,et al.  DNA Structure-specific Nuclease Activities in theSaccharomyces cerevisiae Rad50·Mre11 Complex* , 2001, The Journal of Biological Chemistry.

[27]  R. Abraham Cell cycle checkpoint signaling through the ATM and ATR kinases. , 2001, Genes & development.

[28]  R. Kanaar,et al.  The architecture of the human Rad54–DNA complex provides evidence for protein translocation along DNA , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[29]  M. Bibikova,et al.  Mre11 protein complex prevents double-strand break accumulation during chromosomal DNA replication. , 2001, Molecular cell.

[30]  Yitzhak Hadar,et al.  Initial Steps of Ferulic Acid Polymerization by Lignin Peroxidase* , 2001, The Journal of Biological Chemistry.

[31]  John A. Tainer,et al.  Structural Biochemistry and Interaction Architecture of the DNA Double-Strand Break Repair Mre11 Nuclease and Rad50-ATPase , 2001, Cell.

[32]  Lino Tessarollo,et al.  Targeted disruption of the Nijmegen breakage syndrome gene NBS1 leads to early embryonic lethality in mice , 2001, Current Biology.

[33]  J. Petrini,et al.  DNA Damage-Dependent Nuclear Dynamics of the Mre11 Complex , 2001, Molecular and Cellular Biology.

[34]  Y. Shiloh,et al.  ATM: genome stability, neuronal development, and cancer cross paths. , 2001, Advances in cancer research.

[35]  S. Elledge,et al.  The DNA damage response: putting checkpoints in perspective , 2000, Nature.

[36]  J. Gautier,et al.  Reconstitution of an ATM-dependent checkpoint that inhibits chromosomal DNA replication following DNA damage. , 2000, Molecular cell.

[37]  J. Petrini The Mre11 complex and ATM: collaborating to navigate S phase. , 2000, Current opinion in cell biology.

[38]  Y. Shiloh,et al.  Functional link between ataxia-telangiectasia and Nijmegen breakage syndrome gene products , 2000, Nature.

[39]  D. Livingston,et al.  ATM phosphorylation of Nijmegen breakage syndrome protein is required in a DNA damage response , 2000, Nature.

[40]  M. Gatei,et al.  ATM-dependent phosphorylation of nibrin in response to radiation exposure , 2000, Nature Genetics.

[41]  Bo Xu,et al.  ATM phosphorylates p95/nbs1 in an S-phase checkpoint pathway , 2000, Nature.

[42]  T. Stankovic,et al.  The DNA Double-Strand Break Repair Gene hMRE11 Is Mutated in Individuals with an Ataxia-Telangiectasia-like Disorder , 1999, Cell.

[43]  T Yagi,et al.  Mre11 is essential for the maintenance of chromosomal DNA in vertebrate cells , 1999, The EMBO journal.

[44]  K. Sperling,et al.  Nijmegen breakage syndrome: consequences of defective DNA double strand break repair , 1999, BioEssays : news and reviews in molecular, cellular and developmental biology.

[45]  A. Bradley,et al.  Disruption of mRad50 causes embryonic stem cell lethality, abnormal embryonic development, and sensitivity to ionizing radiation. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[46]  T. Paull,et al.  Nbs1 potentiates ATP-driven DNA unwinding and endonuclease cleavage by the Mre11/Rad50 complex. , 1999, Genes & development.

[47]  Z. Kelman,et al.  Trading Places on DNA—A Three-Point Switch Underlies Primer Handoff from Primase to the Replicative DNA Polymerase , 1999, Cell.

[48]  J. Haber,et al.  The Many Interfaces of Mre11 , 1998, Cell.

[49]  T. Paull,et al.  The 3' to 5' exonuclease activity of Mre 11 facilitates repair of DNA double-strand breaks. , 1998, Molecular cell.

[50]  John R Yates,et al.  The hMre11/hRad50 Protein Complex and Nijmegen Breakage Syndrome: Linkage of Double-Strand Break Repair to the Cellular DNA Damage Response , 1998, Cell.

[51]  Matthias Platzer,et al.  Nibrin, a Novel DNA Double-Strand Break Repair Protein, Is Mutated in Nijmegen Breakage Syndrome , 1998, Cell.

[52]  E. Rogakou,et al.  DNA Double-stranded Breaks Induce Histone H2AX Phosphorylation on Serine 139* , 1998, The Journal of Biological Chemistry.

[53]  K. Wilson,et al.  TPEN, a Zn2+/Fe2+ chelator with low affinity for Ca2+, inhibits lamin assembly, destabilizes nuclear architecture and may independently protect nuclei from apoptosis in vitro. , 1998, Cell calcium.

[54]  B. Nelms,et al.  hMre11 and hRad50 nuclear foci are induced during the normal cellular response to DNA double-strand breaks , 1997, Molecular and cellular biology.