An Improved Brassica rapa Genetic Linkage Map and Locus-specific Variations in a Doubled Haploid Population

[1]  Jiang Lu,et al.  EST-SSRs characterization and in-silico alignments with linkage map SSR loci in grape (Vitis L.) genome , 2012, Genes & Genomics.

[2]  Zhongxu Lin,et al.  Development and Evaluation of Intron and Insertion–Deletion Markers for Gossypium barbadense , 2012, Plant Molecular Biology Reporter.

[3]  R. Chauhan,et al.  Identification and Association Analysis of Castor Bean Orthologous Candidate Gene-Based Markers for High Oil Content in Jatropha curcas , 2012, Plant Molecular Biology Reporter.

[4]  J. Poulain,et al.  The genome of the mesopolyploid crop species Brassica rapa , 2011, Nature Genetics.

[5]  W. Cowling,et al.  Structural and functional comparative mapping between the Brassica A genomes in allotetraploid Brassica napus and diploid Brassica rapa , 2011, Theoretical and Applied Genetics.

[6]  Wei Li,et al.  Integration of Solexa sequences on an ultradense genetic map in Brassica rapa L. , 2011, BMC Genomics.

[7]  Xiaowu Wang,et al.  A sequence-based genetic linkage map as a reference for Brassica rapa pseudochromosome assembly , 2011, BMC Genomics.

[8]  Xiaofeng Wang,et al.  Construction of an integrated genetic linkage map for the A genome of Brassica napus using SSR markers derived from sequenced BACs in B. rapa , 2010, BMC Genomics.

[9]  C. Billot,et al.  In silico mapping of important genes and markers available in the public domain for efficient sorghum breeding , 2010, Molecular Breeding.

[10]  S. Banga,et al.  A microsatellite (SSR) based linkage map of Brassica rapa. , 2009, New biotechnology.

[11]  T. Nishio,et al.  A Brassica rapa Linkage Map of EST-based SNP Markers for Identification of Candidate Genes Controlling Flowering Time and Leaf Morphological Traits , 2009, DNA Research.

[12]  R. Amasino,et al.  Development of public immortal mapping populations, molecular markers and linkage maps for rapid cycling Brassica rapa and B. oleracea , 2009, Theoretical and Applied Genetics.

[13]  B. He,et al.  Detection of DNA changes in somaclonal mutants of rice using SSR markers and transposon display , 2009, Plant Cell, Tissue and Organ Culture (PCTOC).

[14]  Xiuyun Zhao,et al.  Genetic mapping and localization of a major QTL for seedling resistance to downy mildew in Chinese cabbage (Brassica rapa ssp. pekinensis) , 2009, Molecular Breeding.

[15]  Bao Liu,et al.  Tissue culture-induced variation at simple sequence repeats in sorghum (Sorghum bicolor L.) is genotype-dependent and associated with down-regulated expression of a mismatch repair gene, MLH3 , 2009, Plant Cell Reports.

[16]  C. P. Hong,et al.  Sequenced BAC anchored reference genetic map that reconciles the ten individual chromosomes of Brassica rapa , 2009, BMC Genomics.

[17]  Jiefu Zhang,et al.  Map-based cloning and characterization of a gene controlling hairiness and seed coat color traits in Brassica rapa , 2009, Plant Molecular Biology.

[18]  J. Marôco,et al.  Analysis of genetic stability at SSR loci during somatic embryogenesis in maritime pine (Pinus pinaster) , 2009, Plant Cell Reports.

[19]  C. Boland,et al.  Genetic instability caused by loss of MutS homologue 3 in human colorectal cancer. , 2008, Cancer research.

[20]  F. Gugerli,et al.  Insertions–Deletions in a Microsatellite Flanking Region May Be Resolved by Variation in Stuttering Patterns , 2008, Plant Molecular Biology Reporter.

[21]  Ruiqiang Li,et al.  SOAP: short oligonucleotide alignment program , 2008, Bioinform..

[22]  David Edwards,et al.  The reference genetic linkage map for the multinational Brassica rapa genome sequencing project , 2007, Theoretical and Applied Genetics.

[23]  Xiuyun Zhao,et al.  Linkage Map Construction and Quantitative Trait Loci Analysis for Bolting Based on a Double Haploid Population of Brassica rapa , 2007 .

[24]  Christopher G. Love,et al.  Characterization of simple sequence repeat markers derived in silico from Brassica rapa bacterial artificial chromosome sequences and their application in Brassica napus , 2007 .

[25]  R. Finkeldey,et al.  Comparative sequencing of a microsatellite locus reveals size homoplasy within and between european oak species (Quercus spp.) , 2004, Plant Molecular Biology Reporter.

[26]  P. Hand,et al.  Identification of quantitative trait loci for resistance to Xanthomonas campestris pv. campestris in Brassica rapa , 2007, Theoretical and Applied Genetics.

[27]  T. Mitchell-Olds,et al.  The ABC's of comparative genomics in the Brassicaceae: building blocks of crucifer genomes. , 2006, Trends in plant science.

[28]  Jung Sun Kim,et al.  A Sequence-Tagged Linkage Map of Brassica rapa , 2006, Genetics.

[29]  Ryan E. Mills,et al.  An initial map of insertion and deletion (INDEL) variation in the human genome. , 2006, Genome research.

[30]  M. Watson,et al.  DNA Repair Pathway Profiling and Microsatellite Instability in Colorectal Cancer , 2006, Clinical Cancer Research.

[31]  H. Fukuoka,et al.  Simple Sequence Repeat-Based Comparative Genomics Between Brassica rapa and Arabidopsis thaliana: The Genetic Origin of Clubroot Resistance , 2006, Genetics.

[32]  Lt,et al.  Linkage map construction and QTL analysis for bolting trait , 2006 .

[33]  Steven G. Schroeder,et al.  Single Nucleotide Polymorphisms and Insertion–Deletions for Genetic Markers and Anchoring the Maize Fingerprint Contig Physical Map , 2006 .

[34]  A. Good,et al.  Complexities of Chromosome Landing in a Highly Duplicated Genome: Toward Map-Based Cloning of a Gene Controlling Blackleg Resistance in Brassica napus , 2005, Genetics.

[35]  P. Vincourt,et al.  Construction of an oilseed rape (Brassica napus L.) genetic map with SSR markers , 2005, Theoretical and Applied Genetics.

[36]  Y. Lim,et al.  The Korea Brassica Genome Project: a Glimpse of the Brassica Genome Based on Comparative Genome Analysis With Arabidopsis , 2005, Comparative and functional genomics.

[37]  J. Suzuki,et al.  A linkage map ofBrassica rapa (syn.campestris) based on restriction fragment length polymorphism loci , 1991, Theoretical and Applied Genetics.

[38]  Andreas Graner,et al.  Genic microsatellite markers in plants: features and applications. , 2005, Trends in biotechnology.

[39]  H. Fukuoka,et al.  Characteristics of Microsatellites in Brassica rapa Genome and their Potential Utilization for Comparative Genomics in Cruciferae , 2004 .

[40]  B. Yandell,et al.  Comparative mapping of loci controlling winter survival and related traits in oilseed Brassica rapa and B. napus , 2002, Molecular Breeding.

[41]  T. Koba,et al.  Linkage analysis among loci for RAPDs, isozymes and some agronomic traits in Brassica campestris L. , 1997, Euphytica.

[42]  R. Teutonico,et al.  Mapping of RFLP and qualitative trait loci in Brassica rapa and comparison to the linkage maps of B. napus, B. oleracea, and Arabidopsis thaliana , 1994, Theoretical and Applied Genetics.

[43]  Dilip K Nag,et al.  Both CAG repeats and inverted DNA repeats stimulate spontaneous unequal sister-chromatid exchange in Saccharomyces cerevisiae. , 2004, Nucleic acids research.

[44]  Shuancang Yu,et al.  [Mapping and analysis QTL controlling some morphological traits in Chinese cabbage (Brassica campestris L. ssp. pekinensis)]. , 2003, Yi chuan xue bao = Acta genetica Sinica.

[45]  M. Trick,et al.  Efficient large-scale development of microsatellites for marker and mapping applications in Brassica crop species , 2003, Theoretical and Applied Genetics.

[46]  C. Hang,et al.  Genetic linkage map ofBrassica campestris L. using AFLP and RAPD markers , 2002 .

[47]  K. Suwabe,et al.  Isolation and characterization of microsatellites in Brassica rapa L. , 2002, Theoretical and Applied Genetics.

[48]  A. Rafalski.  Applications of single nucleotide polymorphisms in crop genetics. , 2002, Current opinion in plant biology.

[49]  R. Voorrips.  MapChart: software for the graphical presentation of linkage maps and QTLs. , 2002, The Journal of heredity.

[50]  卢钢,et al.  Genetic linkage map of Brassica campestris L.using AFLP and RAPD markers , 2002 .

[51]  K. Boivin,et al.  Comparative structural genomics in the Brassicaceae family , 2001 .

[52]  C. Kole,et al.  Genetic Linkage Map of a Brassica rapa Recombinant Inbred Population , 1997 .

[53]  Y. Chyi,et al.  A genetic linkage map of restriction fragment length polymorphism loci for Brassica rapa (syn. campestris) , 1992 .

[54]  W. F. Thompson,et al.  Rapid isolation of high molecular weight plant DNA. , 1980, Nucleic acids research.

[55]  D. D. Kosambi.  The estimation of map distances from recombination values. , 1943 .