The Fish Microbiota: Research Progress and Potential Applications
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Ming Li | Wei Zhou | Zhigang Zhou | K. Mai | E. Ringø | Yalin Yang | Chao Ran | Zhen Zhang | Yuanyuan Yao | Jihong Liu Clarke | Yinyin Luan | Rolf Erik Olsen | Shouqi Xie
[1] Wei Zhou,et al. Effect of dietary supplementation of Cetobacterium somerae XMX-1 fermentation product on gut and liver health and resistance against bacterial infection of the genetically improved farmed tilapia (GIFT, Oreochromis niloticus). , 2022, Fish & shellfish immunology.
[2] Dang Quang Hieu,et al. Salinity significantly affects intestinal microbiota and gene expression in striped catfish juveniles , 2022, Applied Microbiology and Biotechnology.
[3] Changqing Zhou,et al. Association of Gut Microbiota With Metabolism in Rainbow Trout Under Acute Heat Stress , 2022, Frontiers in Microbiology.
[4] W. L. White,et al. Distinct microbiota composition and fermentation products indicate functional compartmentalization in the hindgut of a marine herbivorous fish , 2022, Molecular ecology.
[5] Shengbiao Hu,et al. Comparative Study of Bacillus amyloliquefaciens X030 on the Intestinal Flora and Antibacterial Activity Against Aeromonas of Grass Carp , 2022, Frontiers in Cellular and Infection Microbiology.
[6] A. Jaramillo-Torres,et al. Consistent changes in the intestinal microbiota of Atlantic salmon fed insect meal diets , 2022, Animal Microbiome.
[7] M. Forlenza,et al. β-Glucan-Induced Immuno-Modulation: A Role for the Intestinal Microbiota and Short-Chain Fatty Acids in Common Carp , 2022, Frontiers in Immunology.
[8] Mei‐Ling Zhang,et al. Pediococcus pentosaceus Enhances Host Resistance Against Pathogen by Increasing IL-1β Production: Understanding Probiotic Effectiveness and Administration Duration , 2021, Frontiers in Immunology.
[9] Zhigang Zhou,et al. Stabilized fermentation product of Cetobacterium somerae improves gut and liver health and antiviral immunity of zebrafish. , 2021, Fish & shellfish immunology.
[10] Zhigang Zhou,et al. Effects of Cetobacterium somerae fermentation product on gut and liver health of common carp (Cyprinus carpio) fed diet supplemented with ultra-micro ground mixed plant proteins , 2021 .
[11] Xuange Liu,et al. The Characteristics of Intestinal Bacterial Community in Three Omnivorous Fishes and Their Interaction with Microbiota from Habitats , 2021, Microorganisms.
[12] Dan Tian,et al. A grass carp model with an antibiotic-disrupted intestinal microbiota , 2021 .
[13] N. Neff,et al. Metagenomic characterization of swine slurry in a North American swine farm operation , 2021, Scientific Reports.
[14] Weiye Li,et al. Modulation of Antioxidant Enzymes, Heat Shock Protein, and Intestinal Microbiota of Large Yellow Croaker (Larimichthys crocea) Under Acute Cold Stress , 2021, Frontiers in Marine Science.
[15] M. Pérez‐Losada,et al. Monitoring Infection and Antibiotic Treatment in the Skin Microbiota of Farmed European Seabass (Dicentrarchus Labrax) Fingerlings , 2021, Microbial Ecology.
[16] B. Bohannan,et al. Host-emitted amino acid cues regulate bacterial chemokinesis to enhance colonization. , 2021, Cell host & microbe.
[17] F. Fava,et al. Processed Animal Proteins from Insect and Poultry By-Products in a Fish Meal-Free Diet for Rainbow Trout: Impact on Intestinal Microbiota and Inflammatory Markers , 2021, International journal of molecular sciences.
[18] Wenbing Zhang,et al. Bacillus amyloliquefaciens ameliorates high-carbohydrate diet-induced metabolic phenotypes by restoration of intestinal acetate-producing bacteria in Nile Tilapia , 2021, British Journal of Nutrition.
[19] Shan Wu,et al. Interactions Between Commensal Microbiota and Mucosal Immunity in Teleost Fish During Viral Infection With SVCV , 2021, Frontiers in Immunology.
[20] Xinhui Li,et al. The gut microbiome composition and degradation enzymes activity of black Amur bream (Megalobrama terminalis) in response to breeding migratory behavior , 2021, Ecology and evolution.
[21] A. Kurilshikov,et al. Long-term dietary patterns are associated with pro-inflammatory and anti-inflammatory features of the gut microbiome , 2021, Gut.
[22] T. W. Whon,et al. Host habitat is the major determinant of the gut microbiome of fish , 2021, Microbiome.
[23] X. Leng,et al. Effects of dietary synbiotics supplementation methods on growth, intestinal health, non-specific immunity and disease resistance of Pacific white shrimp, Litopenaeus vannamei. , 2021, Fish & shellfish immunology.
[24] Stein W. Østerhus,et al. A comparison of two seawater adaptation strategies for Atlantic salmon post-smolt (Salmo salar) grown in recirculating aquaculture systems (RAS): Nitrification, water and gut microbiota, and performance of fish , 2021 .
[25] Guiqin Wang,et al. The positive effects of single or conjoint administration of lactic acid bacteria on Channa argus: Digestive enzyme activity, antioxidant capacity, intestinal microbiota and morphology , 2021 .
[26] Zhigang Zhou,et al. Intestinal Cetobacterium and acetate modify glucose homeostasis via parasympathetic activation in zebrafish , 2021, Gut microbes.
[27] Ó. Monroig,et al. Effects of different dietary oil sources on growth performance, antioxidant capacity and lipid deposition of juvenile golden pompano Trachinotus ovatus , 2021, Aquaculture.
[28] J. Rawls,et al. Fxr signaling and microbial metabolism of bile salts in the zebrafish intestine , 2020, Science Advances.
[29] M. Limborg,et al. Salmon gut microbiota correlates with disease infection status: potential for monitoring health in farmed animals , 2020, Animal Microbiome.
[30] Ao Zeng,et al. Correlation of microbiota in the gut of fish species and water , 2020, 3 Biotech.
[31] Nan Peng,et al. Heterologous expression of AHL lactonase AiiK by Lactobacillus casei MCJΔ1 with great quorum quenching ability against Aeromonas hydrophila AH-1 and AH-4 , 2020, Microbial Cell Factories.
[32] K. Attramadal,et al. Bacterial community assembly in Atlantic cod larvae (Gadus morhua): contributions of ecological processes and metacommunity structure , 2020, FEMS microbiology ecology.
[33] M. Witeska,et al. Antibacterials in Aquatic Environment and Their Toxicity to Fish , 2020, Pharmaceuticals.
[34] G. F. Persinoti,et al. Comparison between the intestinal microbiome of healthy fish and fish experimentally infected with Streptococcus agalactiae , 2020 .
[35] Li Liu,et al. Intestinal microbial profiling of grass carp (Ctenopharyngodon idellus) challenged with Aeromonas hydrophila , 2020 .
[36] K. Lai,et al. Osmotic stress induces gut microbiota community shift in fish. , 2020, Environmental microbiology.
[37] Joaquín Bernal-Bayard,et al. Gnotobiotic rainbow trout (Oncorhynchus mykiss) model reveals endogenous bacteria that protect against Flavobacterium columnare infection , 2020, bioRxiv.
[38] I. Cann,et al. Citrobacter Species Increase Energy Harvest by Modulating Intestinal Microbiota in Fish: Nondominant Species Play Important Functions , 2020, mSystems.
[39] L. Weyrich,et al. Antibiotic-induced alterations and repopulation dynamics of yellowtail kingfish microbiota , 2020, Animal Microbiome.
[40] S. Häussler,et al. Mining zebrafish microbiota reveals key community-level resistance against fish pathogen infection , 2020, The ISME Journal.
[41] M. Izquierdo,et al. Assessment of dietary supplementation with galactomannan oligosaccharides and phytogenics on gut microbiota of European sea bass (Dicentrarchus Labrax) fed low fishmeal and fish oil based diet , 2020, PloS one.
[42] I. Adeshina,et al. Dietary supplementation with Lactobacillus acidophilus enhanced the growth, gut morphometry, antioxidant capacity, and the immune response in juveniles of the common carp, Cyprinus carpio , 2020, Fish Physiology and Biochemistry.
[43] S. Tetu,et al. Alternative dietary protein and water temperature influence the skin and gut microbial communities of yellowtail kingfish (Seriola lalandi) , 2020, PeerJ.
[44] S. Watabe,et al. Interleukin-17A/F1 Deficiency Reduces Antimicrobial Gene Expression and Contributes to Microbiome Alterations in Intestines of Japanese medaka (Oryzias latipes) , 2020, Frontiers in Immunology.
[45] K. Rudi,et al. Association of gut microbiota with metabolism in juvenile Atlantic salmon , 2020, bioRxiv.
[46] Zhongliang Wang,et al. The exploitation of probiotics, prebiotics and synbiotics in aquaculture: present study, limitations and future directions. : a review , 2020, Aquaculture International.
[47] I. Salinas,et al. Specialization of mucosal immunoglobulins in pathogen control and microbiota homeostasis occurred early in vertebrate evolution , 2020, Science Immunology.
[48] D. Sipkema,et al. Feed, Microbiota, and Gut Immunity: Using the Zebrafish Model to Understand Fish Health , 2020, Frontiers in Immunology.
[49] C. Maltecca,et al. Gut microbiome composition differences among breeds impact feed efficiency in swine , 2020, Microbiome.
[50] S. Duperron,et al. Host Species and Body Site Explain the Variation in the Microbiota Associated to Wild Sympatric Mediterranean Teleost Fishes , 2020, Microbial Ecology.
[51] A. Cerutti,et al. Teleost IgD+IgM− B Cells Mount Clonally Expanded and Mildly Mutated Intestinal IgD Responses in the Absence of Lymphoid Follicles , 2019, Cell reports.
[52] Hong-Wei Li,et al. The Response of Microbiota Community to Streptococcus agalactiae Infection in Zebrafish Intestine , 2019, Front. Microbiol..
[53] M. Pérez‐Losada,et al. Effects of disease, antibiotic treatment and recovery trajectory on the microbiome of farmed seabass (Dicentrarchus labrax) , 2019, Scientific Reports.
[54] Qing Wang,et al. Effect of starvation and refeeding on growth, gut microbiota and non-specific immunity in hybrid grouper (Epinephelus fuscoguttatus♀×E. lanceolatus♂). , 2019, Fish & shellfish immunology.
[55] U. Na-Nakorn,et al. Probiotic Effects of a Novel Strain, Acinetobacter KU011TH, on the Growth Performance, Immune Responses, and Resistance against Aeromonas hydrophila of Bighead Catfish (Clarias macrocephalus Günther, 1864) , 2019, Microorganisms.
[56] Nerea Arias-Jayo,et al. Host-microbiome interactions in response to a high-saturated fat diet and fish-oil supplementation in zebrafish adult , 2019, Journal of Functional Foods.
[57] I. Mizrahi,et al. Core gut microbial communities are maintained by beneficial interactions and strain variability in fish , 2019, Nature Microbiology.
[58] J. M. Davison,et al. Commensal bacteria regulate gene expression and differentiation in vertebrate olfactory systems through transcription factor REST. , 2019, Chemical senses.
[59] Shruti Gupta,et al. Antibiotic-Induced Perturbations Are Manifested in the Dominant Intestinal Bacterial Phyla of Atlantic Salmon , 2019, Microorganisms.
[60] Zhigang Zhou,et al. Ability of prebiotic polysaccharides to activate a HIF1α-antimicrobial peptide axis determines liver injury risk in zebrafish , 2019, Communications Biology.
[61] Nameun Kim,et al. Administration of antibiotics can cause dysbiosis in fish gut , 2019, Aquaculture.
[62] Youming Zhang,et al. A New Isolate of Pediococcus pentosaceus (SL001) With Antibacterial Activity Against Fish Pathogens and Potency in Facilitating the Immunity and Growth Performance of Grass Carps , 2019, Front. Microbiol..
[63] S. Chi,et al. Dietary supplementation of probiotic Bacillus coagulans ATCC 7050, improves the growth performance, intestinal morphology, microflora, immune response, and disease confrontation of Pacific white shrimp, Litopenaeus vannamei , 2019, Fish & shellfish immunology.
[64] Zhanjiang Liu,et al. Consumption of florfenicol-medicated feed alters the composition of the channel catfish intestinal microbiota including enriching the relative abundance of opportunistic pathogens , 2019, Aquaculture.
[65] M. Schloter,et al. Oral administration of antibiotics increased the potential mobility of bacterial resistance genes in the gut of the fish Piaractus mesopotamicus , 2019, Microbiome.
[66] Zengfu Song,et al. The Quorum Quenching Bacterium Bacillus licheniformis T-1 Protects Zebrafish against Aeromonas hydrophila Infection , 2019, Probiotics and Antimicrobial Proteins.
[67] H. Volkoff,et al. Gut Microbiota and Energy Homeostasis in Fish , 2019, Front. Endocrinol..
[68] T. Thomas,et al. Diet and diet‐associated bacteria shape early microbiome development in Yellowtail Kingfish (Seriola lalandi) , 2018, Microbial biotechnology.
[69] Iain S. Young,et al. Host selectively contributes to shaping intestinal microbiota of carnivorous and omnivorous fish. , 2019, The Journal of general and applied microbiology.
[70] K. Guillemin,et al. A bacterial immunomodulatory protein with lipocalin-like domains facilitates host–bacteria mutualism in larval zebrafish , 2018, eLife.
[71] D. Nelson,et al. The Probiotic Bacterium Phaeobacter inhibens Downregulates Virulence Factor Transcription in the Shellfish Pathogen Vibrio coralliilyticus by N-Acyl Homoserine Lactone Production , 2018, Applied and Environmental Microbiology.
[72] H. Spaink,et al. Intestinal microbiome adjusts the innate immune setpoint during colonization through negative regulation of MyD88 , 2018, Nature Communications.
[73] Christina L. Graves,et al. Critical Role for a Subset of Intestinal Macrophages in Shaping Gut Microbiota in Adult Zebrafish. , 2018, Cell reports.
[74] R. Lal,et al. Fish Gut Microbiome: Current Approaches and Future Perspectives , 2018, Indian Journal of Microbiology.
[75] Y. Bettarel,et al. Skin microbiome of coral reef fish is highly variable and driven by host phylogeny and diet , 2018, Microbiome.
[76] Wenbiao Chen,et al. Zebrafish as a Model for Obesity and Diabetes , 2018, Front. Cell Dev. Biol..
[77] Zhigang Zhou,et al. Progress in fish gastrointestinal microbiota research , 2018 .
[78] K. Sakata,et al. Intestinal microbiota composition is altered according to nutritional biorhythms in the leopard coral grouper (Plectropomus leopardus) , 2018, PloS one.
[79] S. Limbu,et al. The Presence or Absence of Intestinal Microbiota Affects Lipid Deposition and Related Genes Expression in Zebrafish (Danio rerio) , 2018, Front. Microbiol..
[80] P. Winge,et al. Rearing Water Treatment Induces Microbial Selection Influencing the Microbiota and Pathogen Associated Transcripts of Cod (Gadus morhua) Larvae , 2018, Front. Microbiol..
[81] Fan Xiong,et al. Starvation influences the microbiota assembly and expression of immunity-related genes in the intestine of grass carp (Ctenopharyngodon idellus) , 2018 .
[82] S. Rimoldi,et al. Next generation sequencing for gut microbiome characterization in rainbow trout (Oncorhynchus mykiss) fed animal by-product meals as an alternative to fishmeal protein sources , 2018, PloS one.
[83] A. Assefa,et al. Maintenance of Fish Health in Aquaculture: Review of Epidemiological Approaches for Prevention and Control of Infectious Disease of Fish , 2018, Veterinary medicine international.
[84] M. Besson,et al. The Gills of Reef Fish Support a Distinct Microbiome Influenced by Host-Specific Factors , 2018, Applied and Environmental Microbiology.
[85] T. Legrand,et al. The Inner Workings of the Outer Surface: Skin and Gill Microbiota as Indicators of Changing Gut Health in Yellowtail Kingfish , 2018, Front. Microbiol..
[86] O. Carnevali,et al. Correction to: Effects of Lactogen 13, a New Probiotic Preparation, on Gut Microbiota and Endocrine Signals Controlling Growth and Appetite of Oreochromis niloticus Juveniles , 2018, Microbial Ecology.
[87] Y. Liu,et al. Intestinal microbiota of healthy and unhealthy Atlantic salmon Salmo salar L. in a recirculating aquaculture system , 2018, Journal of Oceanology and Limnology.
[88] V. Kisand,et al. Effect of Environmental Factors and an Emerging Parasitic Disease on Gut Microbiome of Wild Salmonid Fish , 2017, mSphere.
[89] L. Amaral-Zettler,et al. Subtle Microbiome Manipulation Using Probiotics Reduces Antibiotic-Associated Mortality in Fish , 2017, mSystems.
[90] J. Vik,et al. Stable Core Gut Microbiota across the Freshwater-to-Saltwater Transition for Farmed Atlantic Salmon , 2017, Applied and Environmental Microbiology.
[91] S. Wu,et al. Impacts of diet on hindgut microbiota and short-chain fatty acids in grass carp (Ctenopharyngodon idellus ) , 2017 .
[92] W. D. de Vos,et al. Anti-Infective Effect of Adhesive Probiotic Lactobacillus in Fish is Correlated With Their Spatial Distribution in the Intestinal Tissue , 2017, Scientific Reports.
[93] S. Keely,et al. Microbial colonization is required for normal neurobehavioral development in zebrafish , 2017, Scientific Reports.
[94] I. Vatsos,et al. Standardizing the microbiota of fish used in research , 2017, Laboratory animals.
[95] Glenn R. Gibson,et al. The International Scientific Association for Probiotics and Prebiotics ( ISAPP ) consensus statement on the definition and scope of prebiotics , 2018 .
[96] Norihiro Nishimura,et al. Development of a Novel Zebrafish Model for Type 2 Diabetes Mellitus , 2017, Scientific Reports.
[97] Zhigang Zhou,et al. The Growth-Promoting Effect of Dietary Nucleotides in Fish Is Associated with an Intestinal Microbiota-Mediated Reduction in Energy Expenditure. , 2017, The Journal of nutrition.
[98] T. Riemer,et al. Short-term overfeeding of zebrafish with normal or high-fat diet as a model for the development of metabolically healthy versus unhealthy obesity , 2017, BMC Physiology.
[99] G. Carvalho,et al. Parasitism perturbs the mucosal microbiome of Atlantic Salmon , 2017, Scientific Reports.
[100] Q. Yan,et al. Composition of Gut Microbiota in the Gibel Carp (Carassius auratus gibelio) Varies with Host Development , 2017, Microbial Ecology.
[101] T. Ofek,et al. Evidence of Increased Antibiotic Resistance in Phylogenetically-Diverse Aeromonas Isolates from Semi-Intensive Fish Ponds Treated with Antibiotics , 2016, Front. Microbiol..
[102] M. Llewellyn,et al. pH drop impacts differentially skin and gut microbiota of the Amazonian fish tambaqui (Colossoma macropomum) , 2016, Scientific Reports.
[103] I. Guerreiro,et al. Effects of rearing temperature and dietary short‐chain fructooligosaccharides supplementation on allochthonous gut microbiota, digestive enzymes activities and intestine health of turbot (Scophthalmus maximus L.) juveniles , 2016 .
[104] Emily R. Davenport,et al. Cross-species comparisons of host genetic associations with the microbiome , 2016, Science.
[105] Han Liu,et al. The gut microbiome and degradation enzyme activity of wild freshwater fishes influenced by their trophic levels , 2016, Scientific Reports.
[106] Zhigang Zhou,et al. Effect of dietary components on the gut microbiota of aquatic animals. A never‐ending story? , 2016 .
[107] Zhigang Zhou,et al. Abrupt suspension of probiotics administration may increase host pathogen susceptibility by inducing gut dysbiosis , 2016, Scientific Reports.
[108] B. Bohannan,et al. The composition of the zebrafish intestinal microbial community varies across development , 2015, The ISME Journal.
[109] Nathalie M. Delzenne,et al. Towards a more comprehensive concept for prebiotics , 2015, Nature Reviews Gastroenterology &Hepatology.
[110] N. Olivera,et al. Potential aquaculture probiont Lactococcus lactis TW34 produces nisin Z and inhibits the fish pathogen Lactococcus garvieae , 2015, Archives of Microbiology.
[111] Lisa H. Orfe,et al. Entericidin Is Required for a Probiotic Treatment (Enterobacter sp. Strain C6-6) To Protect Trout from Cold-Water Disease Challenge , 2014, Applied and Environmental Microbiology.
[112] M. Llewellyn,et al. Teleost microbiomes: the state of the art in their characterization, manipulation and importance in aquaculture and fisheries , 2014, Front. Microbiol..
[113] P. Bossier,et al. Development of a bacterial challenge test for gnotobiotic Nile tilapia Oreochromis niloticus larvae. , 2014, Diseases of aquatic organisms.
[114] T. Lawley,et al. Emerging insights on intestinal dysbiosis during bacterial infections , 2014, Current opinion in microbiology.
[115] J. Amberg,et al. Fish gut microbiota analysis differentiates physiology and behavior of invasive Asian carp and indigenous American fish , 2013, The ISME Journal.
[116] Qianqian Zhang,et al. Comparative Analysis of the Intestinal Bacterial Communities in Different Species of Carp by Pyrosequencing , 2014, Microbial Ecology.
[117] C. Joshi,et al. Taxonomic and gene-centric metagenomics of the fecal microbiome of low and high feed conversion ratio (FCR) broilers , 2014, Journal of Applied Genetics.
[118] A. Kostic,et al. Exploring host-microbiota interactions in animal models and humans. , 2013, Genes & development.
[119] Rob Knight,et al. Microbiota regulate intestinal absorption and metabolism of fatty acids in the zebrafish. , 2012, Cell host & microbe.
[120] C. Hsieh,et al. T cell tolerance and immunity to commensal bacteria. , 2012, Current opinion in immunology.
[121] P. Ingham,et al. Activation of hypoxia-inducible factor-1α (Hif-1α) delays inflammation resolution by reducing neutrophil apoptosis and reverse migration in a zebrafish inflammation model. , 2011, Blood.
[122] C. Jobin,et al. Microbial colonization induces dynamic temporal and spatial patterns of NF-κB activation in the zebrafish digestive tract. , 2011, Gastroenterology.
[123] E. Mittge,et al. Evidence for a core gut microbiota in the zebrafish , 2011, The ISME Journal.
[124] N. Boon,et al. Development of a bacterial challenge test for gnotobiotic sea bass (Dicentrarchus labrax) larvae. , 2009, Environmental microbiology.
[125] J. Gordon,et al. Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[126] Peter Smith,et al. Evidence for the competitive exclusion of Aeromonas salmonicida from fish with stress-inducible furunculosis by a fluorescent pseudomonad , 1993 .