Risk assessment of heterogeneous TiO2-based engineered nanoparticles (NPs): a QSTR approach using simple periodic table based descriptors

Abstract Nowadays, the risk assessment of engineered nanoparticles (NPs) on human health and animals is of great importance. We have used here simple periodic table based descriptors for mixture compounds to predict the cytotoxicity for the heterogeneous NPs. We have developed mono parametric quantitative structure-toxicity relationship (QSTR) models for 34 TiO2-based NPs modified with (poly) metallic clusters of noble metals (Au, Ag, Pt) to assess the cytotoxicity (-log EC50) towards Chinese Hamster Ovary cell line. After critical statistical analysis of the developed five linear regression (LR) models, we found that the derived models are close to each other in terms of different metric values (R2 = 0.922–0.926; Q2 = 0.907–0.911; R2adj = 0.918–0.922; Q2F1 = 0.930–0.938; Q2F2 = 0.924–0.932). Thus, we have developed a partial least squares (PLS) model using the five descriptors obtained from the five LR models. The developed PLS model showed good predictivity and robustness in terms of both internal (R2 = 0.925; Q2 = 0.911) and external validation (Q2F1 = 0.944; Q2F2 = 0.938) parameters. The descriptors, Electrochemical equivalent (Eq), 2nd ionization potential (2χpi), covalent radius (Rc), amount of Ag (Agamt) and thermal conductivity (Tc) obtained from the final PLS model well explained the cause of cytotoxicity of the heterogeneous NPs without requiring any computationally expensive descriptors. The insights obtained from the developed models suggested that higher electronegativity, lower oxidation state, and release of metal cation from its oxide increase cytotoxicity through various mechanisms. Thus, these models can be used as efficient tools to assess the toxicity with physiological property of the new heterogeneous NPs in the future.

[1]  J. Leszczynski,et al.  Second generation periodic table-based descriptors to encode toxicity of metal oxide nanoparticles to multiple species: QSTR modeling for exploration of toxicity mechanisms , 2018 .

[2]  Jae-Chun Ryu,et al.  Cytotoxicity and genotoxicity of nano-silver in mammalian cell lines , 2010, Molecular & Cellular Toxicology.

[3]  J. Sawai,et al.  Antibacterial characteristics of magnesium oxide powder , 2000 .

[4]  R. Altenburger,et al.  What contributes to the combined effect of a complex mixture? , 2004, Environmental science & technology.

[5]  Jerzy Leszczynski,et al.  Advancing risk assessment of engineered nanomaterials: application of computational approaches. , 2012, Advanced drug delivery reviews.

[6]  Richard D. Handy,et al.  The ecotoxicology of nanoparticles and nanomaterials: current status, knowledge gaps, challenges, and future needs , 2008, Ecotoxicology.

[7]  Menachem Elimelech,et al.  Single-walled carbon nanotubes exhibit strong antimicrobial activity. , 2007, Langmuir : the ACS journal of surfaces and colloids.

[8]  Sung Ju Cho,et al.  Unmodified cadmium telluride quantum dots induce reactive oxygen species formation leading to multiple organelle damage and cell death. , 2005, Chemistry & biology.

[9]  Mayra S. Artiles,et al.  Graphene-based hybrid materials and devices for biosensing. , 2011, Advanced drug delivery reviews.

[10]  Jerzy Leszczynski,et al.  Extrapolating between toxicity endpoints of metal oxide nanoparticles: Predicting toxicity to Escherichia coli and human keratinocyte cell line (HaCaT) with Nano-QTTR. , 2016, Ecotoxicology and environmental safety.

[11]  Mark T. D. Cronin,et al.  Recent Advances in QSAR Studies , 2010 .

[12]  Supratik Kar,et al.  On a simple approach for determining applicability domain of QSAR models , 2015 .

[13]  Kunal Roy,et al.  QSTR with extended topochemical atom (ETA) indices. 16. Development of predictive classification and regression models for toxicity of ionic liquids towards Daphnia magna. , 2013, Journal of hazardous materials.

[14]  Georgia Melagraki,et al.  Enalos InSilicoNano platform: an online decision support tool for the design and virtual screening of nanoparticles , 2014 .

[15]  K. Dreher,et al.  Health and environmental impact of nanotechnology: toxicological assessment of manufactured nanoparticles. , 2003, Toxicological sciences : an official journal of the Society of Toxicology.

[16]  Kunal Roy,et al.  The “double cross-validation” software tool for MLR QSAR model development , 2016 .

[17]  Feng Luan,et al.  Computational ecotoxicology: simultaneous prediction of ecotoxic effects of nanoparticles under different experimental conditions. , 2014, Environment international.

[18]  Wynne W. Chin The partial least squares approach for structural equation modeling. , 1998 .

[19]  Naomi Lubick,et al.  Nanosilver toxicity: ions, nanoparticles--or both? , 2008, Environmental science & technology.

[20]  K. Roy,et al.  Be aware of error measures. Further studies on validation of predictive QSAR models , 2016 .

[21]  Nagamany Nirmalakhandan,et al.  Use of QSAR models in predicting joint effects in multi-component mixtures of organic chemicals , 1998 .

[22]  Jerzy Leszczynski,et al.  Using nano-QSAR to predict the cytotoxicity of metal oxide nanoparticles. , 2011, Nature nanotechnology.

[23]  P. Hewlett,et al.  Quantitative aspects of the synergism between carbaryl and some 1,3-benzodioxole (methylenedioxyphenyl) compounds in houseflies. , 1967, Journal of the science of food and agriculture.

[24]  Jerzy Leszczynski,et al.  Towards Efficient Designing of Safe Nanomaterials , 2012 .

[25]  V. V. Kleandrova,et al.  Computational tool for risk assessment of nanomaterials: novel QSTR-perturbation model for simultaneous prediction of ecotoxicity and cytotoxicity of uncoated and coated nanoparticles under multiple experimental conditions. , 2014, Environmental science & technology.

[26]  Zhifen Lin,et al.  The joint effects on Photobacterium phosphoreum of metal oxide nanoparticles and their most likely coexisting chemicals in the environment. , 2014, Aquatic toxicology.

[27]  Jerzy Leszczynski,et al.  Periodic table-based descriptors to encode cytotoxicity profile of metal oxide nanoparticles: a mechanistic QSTR approach. , 2014, Ecotoxicology and environmental safety.

[28]  A. Neal,et al.  What can be inferred from bacterium–nanoparticle interactions about the potential consequences of environmental exposure to nanoparticles? , 2008, Ecotoxicology.

[29]  P. Drake,et al.  Exposure-related health effects of silver and silver compounds: a review. , 2005, The Annals of occupational hygiene.

[30]  Wonyong Choi,et al.  Linear correlation between inactivation of E. coli and OH radical concentration in TiO2 photocatalytic disinfection. , 2004, Water research.

[31]  K. Roy,et al.  Further exploring rm2 metrics for validation of QSPR models , 2011 .

[32]  Li Zhang,et al.  Computer-based QSARs for predicting mixture toxicity of benzene and its derivatives. , 2007, Chemosphere.

[33]  John D. Walker,et al.  Quantitative cationic‐activity relationships for predicting toxicity of metals , 2003, Environmental toxicology and chemistry.

[34]  T. Ozben Oxidative stress and apoptosis: impact on cancer therapy. , 2007, Journal of pharmaceutical sciences.

[35]  Feng Luan,et al.  nanotoxicology : assessing cytotoxicity of nanoparticles under diverse experimental conditions by using a novel QSTR-perturbation approach † , 2014 .

[36]  Alessandro Giuliani,et al.  Putting the Predictive Toxicology Challenge Into Perspective: Reflections on the Results , 2003, Bioinform..

[37]  Tomasz Puzyn,et al.  Nano-QSAR modeling for ecosafe design of heterogeneous TiO2-based nano-photocatalysts , 2018 .

[38]  Jim Willis,et al.  Science policy considerations for responsible nanotechnology decisions. , 2011, Nature nanotechnology.

[39]  H. Autrup,et al.  Cytotoxicity and genotoxicity of silver nanoparticles in the human lung cancer cell line, A549 , 2011, Archives of Toxicology.

[40]  M. Natália D. S. Cordeiro,et al.  Probing the toxicity of nanoparticles: a unified in silico machine learning model based on perturbation theory , 2017, Nanotoxicology.

[41]  Xiao-Dong Zhou,et al.  Toxicity of Cerium Oxide Nanoparticles in Human Lung Cancer Cells , 2006, International journal of toxicology.

[42]  W. Koppenol The Haber-Weiss cycle – 70 years later , 2001, Redox report : communications in free radical research.

[43]  Mark Crane,et al.  The ecotoxicology and chemistry of manufactured nanoparticles , 2008, Ecotoxicology.

[44]  K. Roy,et al.  QSTR with extended topochemical atom (ETA) indices. 12. QSAR for the toxicity of diverse aromatic compounds to Tetrahymena pyriformis using chemometric tools. , 2009, Chemosphere.

[45]  Limin Wang,et al.  Multi-platform genotoxicity analysis of silver nanoparticles in the model cell line CHO-K1. , 2013, Toxicology letters.

[46]  J. Meng,et al.  Revealing silver cytotoxicity using Au nanorods/Ag shell nanostructures: disrupting cell membrane and causing apoptosis through oxidative damage , 2013 .

[47]  Mark R Wiesner,et al.  Comparison of the abilities of ambient and manufactured nanoparticles to induce cellular toxicity according to an oxidative stress paradigm. , 2006, Nano letters.

[48]  Alexander Tropsha,et al.  Best Practices for QSAR Model Development, Validation, and Exploitation , 2010, Molecular informatics.

[49]  M. Wolff,et al.  BURGER'S MEDICINAL CHEMISTRY AND DRUG DISCOVERY , 1996 .

[50]  R. Todeschini,et al.  Molecular Descriptors for Chemoinformatics: Volume I: Alphabetical Listing / Volume II: Appendices, References , 2009 .

[51]  Feng Luan,et al.  Computational modeling in nanomedicine: prediction of multiple antibacterial profiles of nanoparticles using a quantitative structure-activity relationship perturbation model. , 2015, Nanomedicine.

[52]  K. Døving,et al.  Silver nanoparticles disrupt olfaction in Crucian carp (Carassius carassius) and Eurasian perch (Perca fluviatilis). , 2011, Aquatic toxicology.

[53]  R L Plackett,et al.  A comparison of two approaches to the construction of models for quantal responses to mixtures of drugs. , 1967, Biometrics.

[54]  Tomasz Puzyn,et al.  Combined experimental and computational approach to developing efficient photocatalysts based on Au/Pd–TiO2 nanoparticles , 2016 .

[55]  Steffen Foss Hansen,et al.  Late lessons from early warnings for nanotechnology. , 2008, Nature nanotechnology.

[56]  Jerzy Leszczynski,et al.  Nanomaterials – the Next Great Challenge for Qsar Modelers , 2009, Recent Advances in QSAR Studies.

[57]  Xiao-Dong Zhou,et al.  In vitro toxicity of silica nanoparticles in human lung cancer cells. , 2006, Toxicology and applied pharmacology.

[58]  Paola Gramatica,et al.  Real External Predictivity of QSAR Models: How To Evaluate It? Comparison of Different Validation Criteria and Proposal of Using the Concordance Correlation Coefficient , 2011, J. Chem. Inf. Model..

[59]  Matthias Epple,et al.  TOXICITY OF SILVER NANOPARTICLES INCREASES DURING STORAGE BECAUSE OF SLOW DISSOLUTION UNDER RELEASE OF SILVER IONS , 2010 .

[60]  B. Ames,et al.  Oxidants, antioxidants, and the degenerative diseases of aging. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[61]  Alexander Tropsha,et al.  Quantitative structure-activity relationship modeling of rat acute toxicity by oral exposure. , 2009, Chemical research in toxicology.

[62]  Kumiko Miyazaki,et al.  An empirical analysis of nanotechnology research domains , 2010 .

[63]  Lutz Mädler,et al.  Use of metal oxide nanoparticle band gap to develop a predictive paradigm for oxidative stress and acute pulmonary inflammation. , 2012, ACS nano.

[64]  Maurizio Chiriva-Internati,et al.  Nanotechnology and human health: risks and benefits , 2010, Journal of applied toxicology : JAT.

[65]  Mohammad Wahid Ansari,et al.  The legal status of in vitro embryos , 2014 .

[66]  A. Emeline,et al.  Semiconductor Photocatalysis - Past, Present, and Future Outlook. , 2012, The journal of physical chemistry letters.