Comprehensive analysis of NAC transcription factors in diploid Gossypium: sequence conservation and expression analysis uncover their roles during fiber development

[1]  Yuzhen Shi,et al.  Comprehensive analysis of NAC transcription factors in diploid Gossypium: sequence conservation and expression analysis uncover their roles during fiber development , 2016, Science China Life Sciences.

[2]  A. Myburg,et al.  Structural, evolutionary and functional analysis of the NAC domain protein family in Eucalyptus. , 2015, The New phytologist.

[3]  Xiaofeng Cao.  Whole genome sequencing of cotton—a new chapter in cotton genomics , 2015, Science China Life Sciences.

[4]  Jun You,et al.  Systematic Analysis and Identification of Stress-Responsive Genes of the NAC Gene Family in Brachypodium distachyon , 2015, PloS one.

[5]  Yan Pei.  The homeodomain-containing transcription factor, GhHOX3, is a key regulator of cotton fiber elongation , 2015, Science China Life Sciences.

[6]  Y. Pei.  The homeodomain-containing transcription factor, GhHOX3, is a key regulator of cotton fiber elongation , 2015, Science China Life Sciences.

[7]  Xuede Wang,et al.  Molecular Evolution and Expansion Analysis of the NAC Transcription Factor in Zea mays , 2014, PloS one.

[8]  W. Zhou,et al.  A cotton (Gossypium hirsutum) gene encoding a NAC transcription factor is involved in negative regulation of plant xylem development. , 2014, Plant physiology and biochemistry : PPB.

[9]  Xun Xu,et al.  Genome sequence of the cultivated cotton Gossypium arboreum , 2014, Nature Genetics.

[10]  M. Rouard,et al.  Genomic analysis of NAC transcription factors in banana (Musa acuminata) and definition of NAC orthologous groups for monocots and dicots , 2014, Plant Molecular Biology.

[11]  S. T. Shah,et al.  Isolation and expression profiling of GhNAC transcription factor genes in cotton (Gossypium hirsutum L.) during leaf senescence and in response to stresses. , 2013, Gene.

[12]  Zhicheng Dong,et al.  Transcriptomics: Advances and approaches , 2013, Science China Life Sciences.

[13]  Haihong Shang,et al.  Analyses of the NAC transcription factor gene family in Gossypium raimondii Ulbr.: chromosomal location, structure, phylogeny, and expression patterns. , 2013, Journal of integrative plant biology.

[14]  Fu-guang Li,et al.  The Gossypium raimondii genome, a huge leap forward in cotton genomics. , 2013, Journal of integrative plant biology.

[15]  Manoj Prasad,et al.  Comprehensive Genome-Wide Survey, Genomic Constitution and Expression Profiling of the NAC Transcription Factor Family in Foxtail Millet (Setaria italica L.) , 2013, PloS one.

[16]  Anil Kumar Singh,et al.  Genome-Wide Organization and Expression Profiling of the NAC Transcription Factor Family in Potato (Solanum tuberosum L.) , 2013, DNA research : an international journal for rapid publication of reports on genes and genomes.

[17]  Joshua S. Yuan,et al.  Comparative genomic analysis of NAC transcriptional factors to dissect the regulatory mechanisms for cell wall biosynthesis , 2012, BMC Bioinformatics.

[18]  John Z. Yu,et al.  The draft genome of a diploid cotton Gossypium raimondii , 2012, Nature Genetics.

[19]  R. Sederoff,et al.  Splice variant of the SND1 transcription factor is a dominant negative of SND1 members and their regulation in Populus trichocarpa , 2012, Proceedings of the National Academy of Sciences.

[20]  Chung-Mo Park,et al.  A NAC transcription factor NTL4 promotes reactive oxygen species production during drought-induced leaf senescence in Arabidopsis. , 2012, The Plant journal : for cell and molecular biology.

[21]  E. Nevo,et al.  PHYLOGENETIC ANALYSES UNRAVEL THE EVOLUTIONARY HISTORY OF NAC PROTEINS IN PLANTS , 2012, Evolution; international journal of organic evolution.

[22]  H. Xin,et al.  Comprehensive analysis of NAC domain transcription factor gene family in Vitis vinifera , 2012, Plant Cell Reports.

[23]  R. Dixon,et al.  NAC domain function and transcriptional control of a secondary cell wall master switch. , 2011, The Plant journal : for cell and molecular biology.

[24]  M. Nei,et al.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. , 2011, Molecular biology and evolution.

[25]  Kazuo Shinozaki,et al.  Genome-Wide Survey and Expression Analysis of the Plant-Specific NAC Transcription Factor Family in Soybean During Development and Dehydration Stress , 2011, DNA research : an international journal for rapid publication of reports on genes and genomes.

[26]  Robert D. Finn,et al.  HMMER web server: interactive sequence similarity searching , 2011, Nucleic Acids Res..

[27]  T. Demura,et al.  VASCULAR-RELATED NAC-DOMAIN7 directly regulates the expression of a broad range of genes for xylem vessel formation. , 2011, The Plant journal : for cell and molecular biology.

[28]  Yuxian Zhu,et al.  How cotton fibers elongate: a tale of linear cell-growth mode. , 2011, Current opinion in plant biology.

[29]  Shoshi Kikuchi,et al.  Genome-wide analysis of NAC transcription factor family in rice. , 2010, Gene.

[30]  H. Fukuda,et al.  Arabidopsis VASCULAR-RELATED NAC-DOMAIN6 Directly Regulates the Genes That Govern Programmed Cell Death and Secondary Wall Formation during Xylem Differentiation[C][W] , 2010, Plant Cell.

[31]  Qian Gao,et al.  Comprehensive Analysis of NAC Domain Transcription Factor Gene Family in Populus trichocarpa , 2010, BMC Plant Biology.

[32]  T. Demura,et al.  VND-INTERACTING2, a NAC Domain Transcription Factor, Negatively Regulates Xylem Vessel Formation in Arabidopsis[W][OA] , 2010, Plant Cell.

[33]  R. Dixon,et al.  A Bioinformatic Analysis of NAC Genes for Plant Cell Wall Development in Relation to Lignocellulosic Bioenergy Production , 2009, BioEnergy Research.

[34]  P. A. Reis,et al.  Complete inventory of soybean NAC transcription factors: sequence conservation and expression analysis uncover their distinct roles in stress response. , 2009, Gene.

[35]  Aili Li,et al.  Phylogeny, gene structures, and expression patterns of the ERF gene family in soybean (Glycine max L.) , 2008, Journal of experimental botany.

[36]  L. Xiong,et al.  Systematic Sequence Analysis and Identification of Tissue-specific or Stress-responsive Genes of Nac Transcription Factor Family in Rice , 2008 .

[37]  Marta T. Bokowiec,et al.  Tobacco Transcription Factors: Novel Insights into Transcriptional Regulation in the Solanaceae1[C][W][OA] , 2008, Plant Physiology.

[38]  R. Zhong,et al.  Two NAC domain transcription factors, SND1 and NST1, function redundantly in regulation of secondary wall synthesis in fibers of Arabidopsis , 2007, Planta.

[39]  K. Shinozaki,et al.  NAC Transcription Factors, NST1 and NST3, Are Key Regulators of the Formation of Secondary Walls in Woody Tissues of Arabidopsis[W][OA] , 2007, The Plant Cell Online.

[40]  T. Demura,et al.  SND1, a NAC Domain Transcription Factor, Is a Key Regulator of Secondary Wall Synthesis in Fibers of Arabidopsis[W] , 2006, The Plant Cell Online.

[41]  K. Shinozaki,et al.  The NAC Transcription Factors NST1 and NST2 of Arabidopsis Regulate Secondary Wall Thickenings and Are Required for Anther Dehiscencew⃞ , 2005, The Plant Cell Online.

[42]  Yuxian Zhu,et al.  Isolation and analyses of genes preferentially expressed during early cotton fiber development by subtractive PCR and cDNA array. , 2003, Nucleic acids research.

[43]  A I Saeed,et al.  TM4: a free, open-source system for microarray data management and analysis. , 2003, BioTechniques.

[44]  Shoshi Kikuchi,et al.  Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana. , 2003, DNA research : an international journal for rapid publication of reports on genes and genomes.

[45]  M. Lynch,et al.  The evolutionary fate and consequences of duplicate genes. , 2000, Science.