Generation of ESTs in Vitis vinifera wine grape (Cabernet Sauvignon) and table grape (Muscat Hamburg) and discovery of new candidate genes with potential roles in berry development.
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Marco Marra | Jörg Bohlmann | M. Marra | Nancy Y. Liao | Steven J. M. Jones | R. Holt | S. Lund | J. Bohlmann | F. Peng | D. Lijavetzky | J. M. Martínez Zapater | Steven Jones | K. Reid | J. Schlosser | Robert Holt | Diego Lijavetzky | Fred Y Peng | Karen E Reid | Nancy Liao | James Schlosser | José M Martínez Zapater | Steven T Lund | Steven T. Lund | K. E. Reid
[1] Thomas L. Madden,et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.
[2] M. Marra,et al. Genomics of hybrid poplar (Populus trichocarpa× deltoides) interacting with forest tent caterpillars (Malacosoma disstria): normalized and full‐length cDNA libraries, expressed sequence tags, and a cDNA microarray for the study of insect‐induced defences in poplar , 2006, Molecular ecology.
[3] M. Soares,et al. Normalization and subtraction: two approaches to facilitate gene discovery. , 1996, Genome research.
[4] M. Lodhi,et al. Nuclear DNA content of Vitis species, cultivars, and other genera of the Vitaceae , 2004, Theoretical and Applied Genetics.
[5] M. S. Grando,et al. Comparative analysis of expressed sequence tags from different organs of Vitis vinifera L. , 2005, Functional & Integrative Genomics.
[6] S. Rhee,et al. Functional Annotation of the Arabidopsis Genome Using Controlled Vocabularies1 , 2004, Plant Physiology.
[7] Zhangjun Fei,et al. Comprehensive EST analysis of tomato and comparative genomics of fruit ripening. , 2004, The Plant journal : for cell and molecular biology.
[8] The Arabidopsis Genome Initiative. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana , 2000, Nature.
[9] S. Lund,et al. An optimized grapevine RNA isolation procedure and statistical determination of reference genes for real-time RT-PCR during berry development , 2006, BMC Plant Biology.
[10] P Green,et al. Base-calling of automated sequencer traces using phred. II. Error probabilities. , 1998, Genome research.
[11] Grant R. Cramer,et al. Characterizing the Grape Transcriptome. Analysis of Expressed Sequence Tags from Multiple Vitis Species and Development of a Compendium of Gene Expression during Berry Development1[w] , 2005, Plant Physiology.
[12] Ji-Ping Z. Wang,et al. EST clustering error evaluation and correction , 2004, Bioinform..
[13] M. Gribskov,et al. The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray) , 2006, Science.
[14] E. Ablett,et al. Analysis of grape ESTs: global gene expression patterns in leaf and berry. , 2000, Plant science : an international journal of experimental plant biology.
[15] B Marshall,et al. Gene Ontology Consortium: The Gene Ontology (GO) database and informatics resource , 2004, Nucleic Acids Res..
[16] A. Kerlavage,et al. Complementary DNA sequencing: expressed sequence tags and human genome project , 1991, Science.
[17] A. Ageorges,et al. Generation of ESTs from grape berry at various developmental stages , 2001 .
[18] Masakazu Satou,et al. Genome-wide analysis of alternative pre-mRNA splicing in Arabidopsis thaliana based on full-length cDNA sequences. , 2004, Nucleic acids research.
[19] D. E. Ellis,et al. Proteome analysis of early somatic embryogenesis in Picea glauca , 2005, Proteomics.
[20] S. Delrot,et al. Isogene specific oligo arrays reveal multifaceted changes in gene expression during grape berry (Vitis vinifera L.) development , 2004, Planta.
[21] Takuji Sasaki,et al. The map-based sequence of the rice genome , 2005, Nature.
[22] J. Giovannoni,et al. MOLECULAR BIOLOGY OF FRUIT MATURATION AND RIPENING. , 2001, Annual review of plant physiology and plant molecular biology.
[23] O. Gotoh,et al. Species-specific variation of alternative splicing and transcriptional initiation in six eukaryotes. , 2005, Gene.
[24] R. Dean,et al. Sorghum Expressed Sequence Tags Identify Signature Genes for Drought, Pathogenesis, and Skotomorphogenesis from a Milestone Set of 16,801 Unique Transcripts1[w] , 2005, Plant Physiology.
[25] P. Green,et al. Base-calling of automated sequencer traces using phred. I. Accuracy assessment. , 1998, Genome research.
[26] J. Bohlmann,et al. Efficient Genetic Mapping of Single Nucleotide Polymorphisms Based Upon DNA Mismatch Digestion , 2005, Molecular Breeding.
[27] Jungwon Yoon,et al. The Arabidopsis Information Resource (TAIR): a model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community , 2003, Nucleic Acids Res..
[28] R. Henry,et al. cDNA microarray analysis of developing grape (Vitis vinifera cv. Shiraz) berry skin , 2004, Functional & Integrative Genomics.
[29] R. Henry,et al. Genes associated with the end of dormancy in grapes , 2003, Functional & Integrative Genomics.
[30] Jo McEntyre,et al. The NCBI Handbook , 2002 .
[31] Cornelius S. Barry,et al. Signal transduction systems regulating fruit ripening. , 2004, Trends in plant science.
[32] P. Bork,et al. Alternative splicing and genome complexity , 2002, Nature Genetics.
[33] R. Beaudry,et al. Identification of Genes with Potential Roles in Apple Fruit Development and Biochemistry through Large-Scale Statistical Analysis of Expressed Sequence Tags1[W] , 2006, Plant Physiology.
[34] Huanming Yang,et al. A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica) , 2002, Science.
[35] A. Aharoni,et al. DNA microarrays for functional plant genomics , 2004, Plant Molecular Biology.
[36] M. Soares,et al. Construction and characterization of a normalized cDNA library. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[37] John Quackenbush,et al. The TIGR Gene Indices: reconstruction and representation of expressed gene sequences , 2000, Nucleic Acids Res..
[38] A. Bairoch,et al. The Swiss-Prot protein knowledgebase and ExPASy: providing the plant community with high quality proteomic data and tools. , 2004, Plant physiology and biochemistry : PPB.
[39] S. Lund,et al. The Molecular Basis for Wine Grape Quality-A Volatile Subject , 2006, Science.
[40] X. Huang,et al. CAP3: A DNA sequence assembly program. , 1999, Genome research.
[41] L. Wagner,et al. 21. UniGene: A Unified View of the Transcriptome , 2003 .
[42] R. Dixon,et al. Metabolic engineering of proanthocyanidins through co-expression of anthocyanidin reductase and the PAP1 MYB transcription factor. , 2006, The Plant journal : for cell and molecular biology.
[43] P. Wincker,et al. Anchoring of a large set of markers onto a BAC library for the development of a draft physical map of the grapevine genome , 2006, Theoretical and Applied Genetics.