Three-dimensional structure of the LDL receptor-binding domain of human apolipoprotein E.

Human apolipoprotein E, a blood plasma protein, mediates the transport and uptake of cholesterol and lipid by way of its high affinity interaction with different cellular receptors, including the low-density lipoprotein (LDL) receptor. The three-dimensional structure of the LDL receptor-binding domain of apoE has been determined at 2.5 angstrom resolution by x-ray crystallography. The protein forms an unusually elongated (65 angstroms) four-helix bundle, with the helices apparently stabilized by a tightly packed hydrophobic core that includes leucine zipper-type interactions and by numerous salt bridges on the mostly charged surface. Basic amino acids important for LDL receptor binding are clustered into a surface patch on one long helix. This structure provides the basis for understanding the behavior of naturally occurring mutants that can lead to atherosclerosis.

[1]  S. Lewis,et al.  Microtubule-associated protein MAP2 shares a microtubule binding motif with tau protein , 1988, Science.

[2]  K. Weisgraber,et al.  Human apolipoprotein E3 in aqueous solution. I. Evidence for two structural domains. , 1988, The Journal of biological chemistry.

[3]  W. A. Bradley,et al.  Apolipoprotein E mediates uptake of Sf 100-400 hypertriglyceridemic very low density lipoproteins by the low density lipoprotein receptor pathway in normal human fibroblasts. , 1983, The Journal of biological chemistry.

[4]  M. Boguski,et al.  Primary structure of apolipophorin-III from the migratory locust, Locusta migratoria. Potential amphipathic structures and molecular evolution of an insect apolipoprotein. , 1988, The Journal of biological chemistry.

[5]  R. Mahley,et al.  Binding of arginine-rich (E) apoprotein after recombination with phospholipid vesicles to the low density lipoprotein receptors of fibroblasts. , 1979, The Journal of biological chemistry.

[6]  U. Beisiegel,et al.  The LDL–receptor–related protein, LRP, is an apolipoprotein E-binding protein , 1989, Nature.

[7]  B. Honig,et al.  Calculation of electrostatic potentials in an enzyme active site , 1987, Nature.

[8]  S. McKnight,et al.  The leucine zipper: a hypothetical structure common to a new class of DNA binding proteins. , 1988, Science.

[9]  R. Gregg,et al.  Apolipoprotein E-1Harrisburg: a new variant of apolipoprotein E dominantly associated with type III hyperlipoproteinemia. , 1989, Biochimica et Biophysica Acta.

[10]  K. Weisgraber Apolipoprotein E distribution among human plasma lipoproteins: role of the cysteine-arginine interchange at residue 112. , 1990, Journal of lipid research.

[11]  B. C. Wang Resolution of phase ambiguity in macromolecular crystallography. , 1985, Methods in enzymology.

[12]  R. Gregg,et al.  Abnormal in vivo metabolism of apolipoprotein E4 in humans. , 1986, The Journal of clinical investigation.

[13]  R. Mahley,et al.  Apolipoprotein E: cholesterol transport protein with expanding role in cell biology. , 1988, Science.

[14]  K. Weisgraber,et al.  Human apolipoprotein E3 in aqueous solution. II. Properties of the amino- and carboxyl-terminal domains. , 1988, The Journal of biological chemistry.

[15]  J. L. Smith,et al.  Structure of myohemerythrin in the azidomet state at 1.7/1.3 A resolution. , 1987, Journal of molecular biology.

[16]  R. Mahley,et al.  Normalization of receptor binding of apolipoprotein E2. Evidence for modulation of the binding site conformation. , 1984, The Journal of biological chemistry.

[17]  J. Ponder,et al.  Tertiary templates for proteins. Use of packing criteria in the enumeration of allowed sequences for different structural classes. , 1987, Journal of molecular biology.

[18]  I. Rayment,et al.  Molecular structure of an apolipoprotein determined at 2.5-A resolution. , 1991, Biochemistry.

[19]  Y. Takahashi,et al.  Periodicity of leucine and tandem repetition of a 24-amino acid segment in the primary structure of leucine-rich alpha 2-glycoprotein of human serum. , 1985, Proceedings of the National Academy of Sciences of the United States of America.

[20]  P. S. Kim,et al.  Evidence that the leucine zipper is a coiled coil. , 1989, Science.

[21]  Scott R. Presnell,et al.  Topological distribution of four-alpha-helix bundles. , 1989, Proceedings of the National Academy of Sciences of the United States of America.

[22]  M. Boguski,et al.  On computer-assisted analysis of biological sequences: proline punctuation, consensus sequences, and apolipoprotein repeats. , 1986, Journal of lipid research.

[23]  A. Gotto,et al.  A molecular theory of lipid—protein interactions in the plasma lipoproteins , 1974, FEBS letters.

[24]  R. Mahley,et al.  Cell surface receptor binding of phospholipid . protein complexes containing different ratios of receptor-active and -inactive E apoprotein. , 1980, The Journal of biological chemistry.

[25]  C. Sing,et al.  Apolipoprotein E polymorphism and atherosclerosis. , 1988, Arteriosclerosis.

[26]  David Eisenberg,et al.  Unbiased three-dimensional refinement of heavy-atom parameters by correlation of origin-removed Patterson functions , 1983 .

[27]  J L Sussman,et al.  Constrained-restrained least-squares (CORELS) refinement of proteins and nucleic acids. , 1985, Methods in enzymology.

[28]  R. Mahley,et al.  Complete protein sequence and identification of structural domains of human apolipoprotein B , 1986, Nature.

[29]  A. Gotto,et al.  Apolipoprotein E: phospholipid binding studies with synthetic peptides containing the putative receptor binding region. , 1985, Biochemistry.

[30]  M. Kirschner,et al.  The primary structure and heterogeneity of tau protein from mouse brain. , 1988, Science.

[31]  C. Luo,et al.  Structure and evolution of the apolipoprotein multigene family. , 1986, Journal of molecular biology.

[32]  R. Mahley,et al.  Abnormal lipoprotein receptor-binding activity of the human E apoprotein due to cysteine-arginine interchange at a single site. , 1982, The Journal of biological chemistry.

[33]  M. Boguski,et al.  Evolution of the apolipoproteins. Structure of the rat apo-A-IV gene and its relationship to the human genes for apo-A-I, C-III, and E. , 1986, The Journal of biological chemistry.

[34]  R. Mahley,et al.  Site-specific mutagenesis of human apolipoprotein E. Receptor binding activity of variants with single amino acid substitutions. , 1988, The Journal of biological chemistry.

[35]  G. Bruns,et al.  Isolation, characterization, and mapping to chromosome 19 of the human apolipoprotein E gene. , 1985, The Journal of biological chemistry.

[36]  F. Richards,et al.  Identification of structural motifs from protein coordinate data: Secondary structure and first‐level supersecondary structure * , 1988, Proteins.

[37]  W. A. Bradley,et al.  Sequence, structure, receptor-binding domains and internal repeats of human apolipoprotein B-100 , 1986, Nature.

[38]  D. Agard,et al.  Crystallization and preliminary X-ray diffraction studies on the amino-terminal (receptor-binding) domain of human apolipoprotein E3 from serum very low density lipoproteins. , 1988, Journal of molecular biology.

[39]  R. Mahley,et al.  The receptor-binding domain of human apolipoprotein E. Binding of apolipoprotein E fragments. , 1983, The Journal of biological chemistry.