A novel method of transcriptome interpretation reveals a quantitative suppressive effect on tomato immune signaling by two domains in a single pathogen effector protein
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G. Martin | Z. Fei | Yi Zheng | C. Myers | M. A. Pombo | D. M. Dunham | Jay N. Worley
[1] Xuegong Zhang,et al. TRANSCRIPTOME ANALYSIS USING NEXT-GENERATION SEQUENCING , 2015 .
[2] G. Martin,et al. Pseudomonas syringae pv. tomato DC3000 Type III Secretion Effector Polymutants Reveal an Interplay between HopAD1 and AvrPtoB. , 2015, Cell host & microbe.
[3] J. Parker,et al. Effector-triggered immunity: from pathogen perception to robust defense. , 2015, Annual review of plant biology.
[4] G. Martin,et al. Transcriptomic analysis reveals tomato genes whose expression is induced specifically during effector-triggered immunity and identifies the Epk1 protein kinase which is required for the host response to three bacterial effector proteins , 2014, Genome Biology.
[5] S. Rivas,et al. Transcriptional control of plant defence responses. , 2014, Current opinion in plant biology.
[6] C. Zipfel. Plant pattern-recognition receptors. , 2014, Trends in immunology.
[7] G. Martin,et al. Transcriptomics-based screen for genes induced by flagellin and repressed by pathogen effectors identifies a cell wall-associated kinase involved in plant immunity , 2013, Genome Biology.
[8] G. Martin,et al. Allelic variation in two distinct Pseudomonas syringae flagellin epitopes modulates the strength of plant immune responses but not bacterial motility. , 2013, The New phytologist.
[9] M. Banfield,et al. On the front line: structural insights into plant–pathogen interactions , 2013, Nature Reviews Microbiology.
[10] Xiangzong Meng,et al. MAPK cascades in plant disease resistance signaling. , 2013, Annual review of phytopathology.
[11] Erin L. Doyle,et al. TAL effectors: highly adaptable phytobacterial virulence factors and readily engineered DNA-targeting proteins. , 2013, Trends in cell biology.
[12] Z. Fei,et al. Catalyzing plant science research with RNA-seq , 2013, Front. Plant Sci..
[13] L. Deslandes,et al. Catch me if you can: bacterial effectors and plant targets. , 2012, Trends in plant science.
[14] C. Pieterse,et al. Hormonal modulation of plant immunity. , 2012, Annual review of cell and developmental biology.
[15] Jian-Min Zhou,et al. Plant-bacterial pathogen interactions mediated by type III effectors. , 2012, Current opinion in plant biology.
[16] P. Ronald,et al. Plant innate immunity: perception of conserved microbial signatures. , 2012, Annual review of plant biology.
[17] A. Collmer,et al. Pseudomonas syringae type III effector repertoires: last words in endless arguments. , 2012, Trends in microbiology.
[18] G. Martin,et al. Structural analysis of Pseudomonas syringae AvrPtoB bound to host BAK1 reveals two similar kinase-interacting domains in a type III Effector. , 2011, Cell host & microbe.
[19] G. Martin. Suppression and Activation of the Plant Immune System by Pseudomonas syringae Effectors AvrPto and AvrPtoB , 2011 .
[20] J. Setubal,et al. The Plant Pathogen Pseudomonas syringae pv. tomato Is Genetically Monomorphic and under Strong Selection to Evade Tomato Immunity , 2011, PLoS pathogens.
[21] C. Zipfel,et al. Activation of plant pattern-recognition receptors by bacteria. , 2011, Current opinion in microbiology.
[22] Anna Block,et al. Plant targets for Pseudomonas syringae type III effectors: virulence targets or guarded decoys? , 2011, Current opinion in microbiology.
[23] G. Martin,et al. Genetic disassembly and combinatorial reassembly identify a minimal functional repertoire of type III effectors in Pseudomonas syringae , 2011, Proceedings of the National Academy of Sciences.
[24] G. Martin,et al. Two virulence determinants of type III effector AvrPto are functionally conserved in diverse Pseudomonas syringae pathovars. , 2010, The New phytologist.
[25] M. Kokkinidis,et al. Playing the "Harp": evolution of our understanding of hrp/hrc genes. , 2010, Annual review of phytopathology.
[26] John P. Rathjen,et al. Plant immunity: towards an integrated view of plant–pathogen interactions , 2010, Nature Reviews Genetics.
[27] E. Crabill,et al. Plant Immunity Directly or Indirectly Restricts the Injection of Type III Effectors by the Pseudomonas syringae Type III Secretion System1[W][OA] , 2010, Plant Physiology.
[28] G. Martin,et al. Identification of Nicotiana benthamiana genes involved in pathogen-associated molecular pattern-triggered immunity. , 2010, Molecular plant-microbe interactions : MPMI.
[29] M. Marra,et al. Applications of new sequencing technologies for transcriptome analysis. , 2009, Annual review of genomics and human genetics.
[30] G. Martin,et al. Deletions in the Repertoire of Pseudomonas syringae pv. tomato DC3000 Type III Secretion Effector Genes Reveal Functional Overlap among Effectors , 2009, PLoS pathogens.
[31] Peter J Hume,et al. The Salmonella Effector SptP Dephosphorylates Host AAA+ ATPase VCP to Promote Development of its Intracellular Replicative Niche , 2009, Cell host & microbe.
[32] Sophia Mersmann,et al. Plant Pattern-Recognition Receptor FLS2 Is Directed for Degradation by the Bacterial Ubiquitin Ligase AvrPtoB , 2008, Current Biology.
[33] Ping He,et al. Bacterial effectors target the common signaling partner BAK1 to disrupt multiple MAMP receptor-signaling complexes and impede plant immunity. , 2008, Cell host & microbe.
[34] T. Boller,et al. Molecular identification and characterization of the tomato flagellin receptor LeFLS2, an orthologue of Arabidopsis FLS2 exhibiting characteristically different perception specificities , 2007, Plant Molecular Biology.
[35] Brian E. Granger,et al. IPython: A System for Interactive Scientific Computing , 2007, Computing in Science & Engineering.
[36] John D. Hunter,et al. Matplotlib: A 2D Graphics Environment , 2007, Computing in Science & Engineering.
[37] G. Martin,et al. Specific Bacterial Suppressors of MAMP Signaling Upstream of MAPKKK in Arabidopsis Innate Immunity , 2006, Cell.
[38] H. Schweizer,et al. A 10-min method for preparation of highly electrocompetent Pseudomonas aeruginosa cells: application for DNA fragment transfer between chromosomes and plasmid transformation. , 2006, Journal of microbiological methods.
[39] G. Martin,et al. Host-Mediated Phosphorylation of Type III Effector AvrPto Promotes Pseudomonas Virulence and Avirulence in Tomato[W] , 2006, The Plant Cell Online.
[40] T. Konishi. A thermodynamic model of transcriptome formation , 2005, Nucleic acids research.
[41] G. Martin,et al. Role of mitogen-activated protein kinases in plant immunity. , 2005, Current opinion in plant biology.
[42] G. Martin,et al. Pseudomonas syringae pv. tomato type III effectors AvrPto and AvrPtoB promote ethylene-dependent cell death in tomato. , 2005, The Plant journal : for cell and molecular biology.
[43] J. Glazebrook. Contrasting mechanisms of defense against biotrophic and necrotrophic pathogens. , 2005, Annual review of phytopathology.
[44] David Botstein,et al. GO: : TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes , 2004, Bioinform..
[45] A. Roy,et al. Prospects for breeding apomictic rice: A reassessment , 2004 .
[46] G. Martin,et al. The solution structure of type III effector protein AvrPto reveals conformational and dynamic features important for plant pathogenesis. , 2004, Structure.
[47] G. Martin,et al. Two MAPK cascades, NPR1, and TGA transcription factors play a role in Pto-mediated disease resistance in tomato. , 2003, The Plant journal : for cell and molecular biology.
[48] Jia Liu,et al. The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000 , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[49] G. Martin,et al. The Pseudomonas AvrPto Protein Is Differentially Recognized by Tomato and Tobacco and Is Localized to the Plant Plasma Membrane , 2000, Plant Cell.
[50] J. Galán,et al. A Salmonella protein antagonizes Rac-1 and Cdc42 to mediate host-cell recovery after bacterial invasion , 1999, Nature.
[51] T. Boller,et al. Plants have a sensitive perception system for the most conserved domain of bacterial flagellin. , 1999, The Plant journal : for cell and molecular biology.
[52] D. Cuppels. Generation and Characterization of Tn5 Insertion Mutations in Pseudomonas syringae pv. tomato , 1986, Applied and environmental microbiology.
[53] Lin Yuan,et al. What is the solution? , 1984, Nature.
[54] G. Martin,et al. A tomato LysM receptor-like kinase promotes immunity and its kinase activity is inhibited by AvrPtoB. , 2012, The Plant journal : for cell and molecular biology.
[55] G. Martin,et al. Phosphorylation of the Pseudomonas syringae effector AvrPto is required for FLS2/BAK1-independent virulence activity and recognition by tobacco. , 2010, The Plant journal : for cell and molecular biology.
[56] G. Martin,et al. An avrPto/avrPtoB mutant of Pseudomonas syringae pv. tomato DC3000 does not elicit Pto-mediated resistance and is less virulent on tomato. , 2005, Molecular plant-microbe interactions : MPMI.
[57] Eric Jones,et al. SciPy: Open Source Scientific Tools for Python , 2001 .