Mitochondrial metabolism coordinates stage-specific repair processes in macrophages during wound healing.
暂无分享,去创建一个
T. Langer | E. Pearce | J. Brüning | T. Ulas | J. Schultze | S. Eming | A. Trifunovic | S. Willenborg | David E Sanin | Axel Roers | Xiaolei Ding | A. Gerbaulet | D. E. Sanin | J. Nüchel | A. Jais | T. MacVicar | Milica Popovic | D. Sanin
[1] E. Pearce,et al. Metabolic orchestration of the wound healing response. , 2021, Cell metabolism.
[2] M. Hatzoglou,et al. Adaptation to mitochondrial stress requires CHOP-directed tuning of ISR , 2021, Science Advances.
[3] J. C. Love,et al. Longitudinal transcriptomics define the stages of myeloid activation in the living human brain after intracerebral hemorrhage , 2021, Science Immunology.
[4] D. Nomura,et al. Mitohormesis reprograms macrophage metabolism to enforce tolerance , 2020, Nature Metabolism.
[5] Raphael Gottardo,et al. Integrated analysis of multimodal single-cell data , 2020, Cell.
[6] J. Teodoro,et al. Mitohormesis , 2021, Mitochondrial Physiology and Vegetal Molecules.
[7] P. Walter,et al. The integrated stress response: From mechanism to disease , 2020, Science.
[8] J. Riemer,et al. A salvage pathway maintains highly functional respiratory complex I , 2020, Nature Communications.
[9] V. Velagapudi,et al. Fibroblast Growth Factor 21 Drives Dynamics of Local and Systemic Stress Responses in Mitochondrial Myopathy with mtDNA Deletions. , 2019, Cell metabolism.
[10] B. Lambrecht,et al. Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis , 2019, bioRxiv.
[11] B. Ren,et al. Metabolic regulation of gene expression by histone lactylation , 2019, Nature.
[12] A. Akhtar,et al. MAPCap allows high-resolution detection and differential expression analysis of transcription start sites , 2019, Nature Communications.
[13] Paul J. Hoffman,et al. Comprehensive Integration of Single-Cell Data , 2018, Cell.
[14] R. Satija,et al. Normalization and variance stabilization of single-cell RNA-seq data using regularized negative binomial regression , 2019, Genome Biology.
[15] Joerg M. Buescher,et al. Inflammatory macrophage dependence on NAD+ salvage is a consequence of reactive oxygen species–mediated DNA damage , 2019, Nature Immunology.
[16] R. Medzhitov,et al. An evolutionary perspective on immunometabolism , 2019, Science.
[17] S. C. Huang,et al. Mitochondrial Membrane Potential Regulates Nuclear Gene Expression in Macrophages Exposed to Prostaglandin E2 , 2018, Immunity.
[18] Leland McInnes,et al. UMAP: Uniform Manifold Approximation and Projection , 2018, J. Open Source Softw..
[19] Paul Martin,et al. Live imaging of wound angiogenesis reveals macrophage orchestrated vessel sprouting and regression , 2018, The EMBO journal.
[20] Luke Zappia,et al. Clustering trees: a visualization for evaluating clusterings at multiple resolutions , 2018, bioRxiv.
[21] Erika L. Pearce,et al. Mitochondrial Dynamics at the Interface of Immune Cell Metabolism and Function. , 2018, Trends in immunology.
[22] P. Loke,et al. Recent Advances in Type-2-Cell-Mediated Immunity: Insights from Helminth Infection. , 2017, Immunity.
[23] I. Atanassov,et al. Transcriptomic and proteomic landscape of mitochondrial dysfunction reveals secondary coenzyme Q deficiency in mammals , 2017, eLife.
[24] Robert W. Williams,et al. Multi-omics analysis identifies ATF4 as a key regulator of the mitochondrial stress response in mammals , 2017, The Journal of cell biology.
[25] Y. Kong,et al. Macrophage function in tissue repair and remodeling requires IL-4 or IL-13 with apoptotic cells , 2017, Science.
[26] Paul Martin,et al. Inflammation and metabolism in tissue repair and regeneration , 2017, Science.
[27] M. Colonna,et al. Metabolic Reprogramming Mediated by the mTORC2-IRF4 Signaling Axis Is Essential for Macrophage Alternative Activation. , 2016, Immunity.
[28] R. Xavier,et al. Succinate Dehydrogenase Supports Metabolic Repurposing of Mitochondria to Drive Inflammatory Macrophages , 2016, Cell.
[29] Fidel Ramírez,et al. deepTools2: a next generation web server for deep-sequencing data analysis , 2016, Nucleic Acids Res..
[30] Bruce A. Corliss,et al. Macrophages: An Inflammatory Link Between Angiogenesis and Lymphangiogenesis , 2016, Microcirculation.
[31] E. Pearce,et al. Immunometabolism governs dendritic cell and macrophage function , 2016, The Journal of experimental medicine.
[32] A. Regev,et al. Mitochondrial dysfunction remodels one-carbon metabolism in human cells , 2015, eLife.
[33] W. Bloch,et al. Interleukin-4 Receptor α Signaling in Myeloid Cells Controls Collagen Fibril Assembly in Skin Repair. , 2015, Immunity.
[34] F. Villarroya,et al. Enhanced fatty acid oxidation in adipocytes and macrophages reduces lipid-induced triglyceride accumulation and inflammation. , 2015, American journal of physiology. Endocrinology and metabolism.
[35] Abhishek K. Jha,et al. Network integration of parallel metabolic and transcriptional data reveals metabolic modules that regulate macrophage polarization. , 2015, Immunity.
[36] W. Huber,et al. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 , 2014, Genome Biology.
[37] Maxim N. Artyomov,et al. Cell-intrinsic lysosomal lipolysis is essential for macrophage alternative activation , 2014, Nature Immunology.
[38] E. Rugarli,et al. Tissue-specific loss of DARS2 activates stress responses independently of respiratory chain deficiency in the heart. , 2014, Cell metabolism.
[39] Åsa K. Björklund,et al. Full-length RNA-seq from single cells using Smart-seq2 , 2014, Nature Protocols.
[40] Wei Shi,et al. featureCounts: an efficient general purpose program for assigning sequence reads to genomic features , 2013, Bioinform..
[41] T. Wynn,et al. Type 2 immunity and wound healing: evolutionary refinement of adaptive immunity by helminths , 2013, Nature Reviews Immunology.
[42] Liang Zheng,et al. Succinate is an inflammatory signal that induces IL-1β through HIF-1α , 2013, Nature.
[43] Thomas R. Gingeras,et al. STAR: ultrafast universal RNA-seq aligner , 2013, Bioinform..
[44] A. Nagy,et al. CCR2 recruits an inflammatory macrophage subpopulation critical for angiogenesis in tissue repair. , 2012, Blood.
[45] Kevin W Eliceiri,et al. NIH Image to ImageJ: 25 years of image analysis , 2012, Nature Methods.
[46] O. Feron,et al. Lactate stimulates angiogenesis and accelerates the healing of superficial and ischemic wounds in mice , 2012, Angiogenesis.
[47] Steven L Salzberg,et al. Fast gapped-read alignment with Bowtie 2 , 2012, Nature Methods.
[48] T. Wynn,et al. Protective and pathogenic functions of macrophage subsets , 2011, Nature Reviews Immunology.
[49] F. Finkelman,et al. Local Macrophage Proliferation, Rather than Recruitment from the Blood, Is a Signature of TH2 Inflammation , 2011, Science.
[50] Marcel Martin. Cutadapt removes adapter sequences from high-throughput sequencing reads , 2011 .
[51] J. Rathmell,et al. Cutting Edge: Distinct Glycolytic and Lipid Oxidative Metabolic Programs Are Essential for Effector and Regulatory CD4+ T Cell Subsets , 2011, The Journal of Immunology.
[52] Pedro M. Valero-Mora,et al. ggplot2: Elegant Graphics for Data Analysis , 2010 .
[53] Daniel Rico,et al. Substrate Fate in Activated Macrophages: A Comparison between Innate, Classic, and Alternative Activation , 2010, The Journal of Immunology.
[54] Werner Müller,et al. Differential Roles of Macrophages in Diverse Phases of Skin Repair , 2010, The Journal of Immunology.
[55] Serban Nacu,et al. Fast and SNP-tolerant detection of complex variants and splicing in short reads , 2010, Bioinform..
[56] T. Koh,et al. Selective and specific macrophage ablation is detrimental to wound healing in mice. , 2009, The American journal of pathology.
[57] Michael P. Murphy,et al. How mitochondria produce reactive oxygen species , 2008, The Biochemical journal.
[58] V. Sumbayev,et al. LPS‐induced Toll‐like receptor 4 signalling triggers cross‐talk of apoptosis signal‐regulating kinase 1 (ASK1) and HIF‐1α protein , 2008 .
[59] S. Werner,et al. Wound repair and regeneration , 1994, Nature.
[60] T. K. Hunt,et al. Aerobically derived lactate stimulates revascularization and tissue repair via redox mechanisms. , 2007, Antioxidants & redox signaling.
[61] H. Fehling,et al. Faithful activation of an extra‐bright red fluorescent protein in “knock‐in” Cre‐reporter mice ideally suited for lineage tracing studies , 2007, European journal of immunology.
[62] D. Greaves,et al. Oxidative metabolism and PGC-1beta attenuate macrophage-mediated inflammation. , 2006, Cell metabolism.
[63] D. Ron,et al. CHOP induces death by promoting protein synthesis and oxidation in the stressed endoplasmic reticulum. , 2004, Genes & development.
[64] F. Brombacher,et al. Alternative macrophage activation is essential for survival during schistosomiasis and downmodulates T helper 1 responses and immunopathology. , 2004, Immunity.
[65] W. Reith,et al. Conditional gene targeting in macrophages and granulocytes using LysMcre mice , 1999, Transgenic Research.
[66] V. Luria,et al. Maternally expressed PGK-Cre transgene as a tool for early and uniform activation of the Cre site-specific recombinase , 1998, Transgenic Research.
[67] Odilo Trabold,et al. Lactate and oxygen constitute a fundamental regulatory mechanism in wound healing , 2003, Wound repair and regeneration : official publication of the Wound Healing Society [and] the European Tissue Repair Society.
[68] N. Chandel,et al. Reactive Oxygen Species Generated at Mitochondrial Complex III Stabilize Hypoxia-inducible Factor-1α during Hypoxia , 2000, The Journal of Biological Chemistry.