Comparative analysis of tree classification models for detecting fusarium oxysporum f. sp cubense (TR4) based on multi soil sensor parameters

Use of wireless sensor networks and smartphone integration design to monitor environmental parameters surrounding plantations is made possible because of readily available and affordable sensors. Providing low cost monitoring devices would be beneficial, especially to small farm owners, in a developing country like the Philippines, where agriculture covers a significant amount of the labor market. This study discusses the integration of wireless soil sensor devices and smartphones to create an application that will use multidimensional analysis to detect the presence or absence of plant disease. Specifically, soil sensors are designed to collect soil quality parameters in a sink node from which the smartphone collects data from via Bluetooth. Given these, there is a need to develop a classification model on the mobile phone that will report infection status of a soil. Though tree classification is the most appropriate approach for continuous parameter-based datasets, there is a need to determine whether tree models will result to coherent results or not. Soil sensor data that resides on the phone is modeled using several variations of decision tree, namely: decision tree (DT), best-fit (BF) decision tree, functional tree (FT), Naive Bayes (NB) decision tree, J48, J48graft and LAD tree, where decision tree approaches the problem by considering all sensor nodes as one. Results show that there are significant differences among soil sensor parameters indicating that there are variances in scores between the infected and uninfected sites. Furthermore, analysis of variance in accuracy, recall, precision and F1 measure scores from tree classification models homogeneity among NBTree, J48graft and J48 tree classification models.

[1]  S. Ustin,et al.  Detection of stress in tomatoes induced by late blight disease in California, USA, using hyperspectral remote sensing , 2003 .

[2]  Lingmei Jiang,et al.  Comparison of the classification accuracy of three soil freeze–thaw discrimination algorithms in China using SSMIS and AMSR-E passive microwave imagery , 2014 .

[3]  L. Plümer,et al.  Original paper: Early detection and classification of plant diseases with Support Vector Machines based on hyperspectral reflectance , 2010 .

[4]  Biswanath Mukherjee,et al.  Wireless sensor network survey , 2008, Comput. Networks.

[5]  R. Ploetz,et al.  First Report of Fusarium oxysporum f. sp. cubense Tropical Race 4 Associated with Panama Disease of Banana outside Southeast Asia. , 2014, Plant disease.

[6]  Chi-Yu Chen,et al.  A molecular diagnosis method using real-time PCR for quantification and detection of Fusarium oxysporum f. sp. cubense race 4 , 2013, European Journal of Plant Pathology.

[7]  Sanjeev Wagh,et al.  Monitoring and Detection of Agricultural Disease using Wireless Sensor Network , 2014 .

[8]  A. Molina,et al.  Recent occurrence of Fusarium oxysporum f. sp. cubense tropical race 4 in Asia. , 2009 .

[9]  Clive H. Bock,et al.  Plant Disease Severity Estimated Visually, by Digital Photography and Image Analysis, and by Hyperspectral Imaging , 2010 .

[10]  Gunter Menz,et al.  Multi-temporal wheat disease detection by multi-spectral remote sensing , 2007, Precision Agriculture.

[11]  S. N. Merchant,et al.  Data mining and wireless sensor network for agriculture pest/disease predictions , 2011, 2011 World Congress on Information and Communication Technologies.

[12]  Anne-Katrin Mahlein,et al.  Recent advances in sensing plant diseases for precision crop protection , 2012, European Journal of Plant Pathology.

[13]  R. Ploetz Fusarium Wilt of Banana Is Caused by Several Pathogens Referred to as Fusarium oxysporum f. sp. cubense. , 2006, Phytopathology.

[14]  João Gama,et al.  Functional Trees , 2001, Machine Learning.

[15]  Carlos Eduardo Cugnasca,et al.  Comparative analysis of decision tree algorithms on quality of water contaminated with soil , 2015 .

[16]  R. Ramasamy,et al.  Current and Prospective Methods for Plant Disease Detection , 2015, Biosensors.

[17]  Charalampos Z. Patrikakis,et al.  Next Generation Society. Technological and Legal Issues , 2010 .