Releasing the Kraken
暂无分享,去创建一个
[1] Jennifer Lu,et al. Improved metagenomic analysis with Kraken 2 , 2019, Genome Biology.
[2] Pardis C. Sabeti,et al. Benchmarking Metagenomics Tools for Taxonomic Classification , 2019, Cell.
[3] Daniel N. Baker,et al. KrakenUniq: confident and fast metagenomics classification using unique k-mer counts , 2018, Genome Biology.
[4] Derrick E. Wood,et al. Kraken: ultrafast metagenomic sequence classification using exact alignments , 2014, Genome Biology.
[5] Carl Kingsford,et al. A fast, lock-free approach for efficient parallel counting of occurrences of k-mers , 2011, Bioinform..
[6] S. Salzberg,et al. Phymm and PhymmBL: Metagenomic Phylogenetic Classification with Interpolated Markov Models , 2009, Nature Methods.
[7] Naryttza N. Diaz,et al. Phylogenetic classification of short environmental DNA fragments , 2008, Nucleic acids research.
[8] M. Pop,et al. Metagenomic Analysis of the Human Distal Gut Microbiome , 2006, Science.
[9] O. White,et al. Environmental Genome Shotgun Sequencing of the Sargasso Sea , 2004, Science.
[10] Thomas L. Madden,et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.
[11] James W. Fickett,et al. Fast optimal alignment , 1984, Nucleic Acids Res..
[12] Alexander F. Auch,et al. Access the most recent version at doi: 10.1101/gr.5969107 References Open Access , 2007 .
[13] I. Rigoutsos,et al. Accurate phylogenetic classification of variable-length DNA fragments , 2007, Nature Methods.