An ultra-stable single-chain insulin analog resists thermal inactivation and exhibits biological signaling duration equivalent to the native protein

Thermal degradation of insulin complicates its delivery and use. Previous efforts to engineer ultra-stable analogs were confounded by prolonged cellular signaling in vivo, of unclear safety and complicating mealtime therapy. We therefore sought an ultra-stable analog whose potency and duration of action on intravenous bolus injection in diabetic rats are indistinguishable from wild-type (WT) insulin. Here, we describe the structure, function, and stability of such an analog, a 57-residue single-chain insulin (SCI) with multiple acidic substitutions. Cell-based studies revealed native-like signaling properties with negligible mitogenic activity. Its crystal structure, determined as a novel zinc-free hexamer at 2.8 Å, revealed a native insulin fold with incomplete or absent electron density in the C domain; complementary NMR studies are described in the accompanying article. The stability of the analog (ΔGU 5.0(±0.1) kcal/mol at 25 °C) was greater than that of WT insulin (3.3(±0.1) kcal/mol). On gentle agitation, the SCI retained full activity for >140 days at 45 °C and >48 h at 75 °C. These findings indicate that marked resistance to thermal inactivation in vitro is compatible with native duration of activity in vivo. Further, whereas WT insulin forms large and heterogeneous aggregates above the standard 0.6 mm pharmaceutical strength, perturbing the pharmacokinetic properties of concentrated formulations, dynamic light scattering, and size-exclusion chromatography revealed only limited SCI self-assembly and aggregation in the concentration range 1–7 mm. Such a combination of favorable biophysical and biological properties suggests that SCIs could provide a global therapeutic platform without a cold chain.

[1]  Brian J. Smith,et al.  Solution structure of an ultra-stable single-chain insulin analog connects protein dynamics to a novel mechanism of receptor binding , 2017, The Journal of Biological Chemistry.

[2]  R. Beaser,et al.  Insulin: Making Sense of Current Options. , 2016, Endocrinology and metabolism clinics of North America.

[3]  M. Lawrence,et al.  Contribution of TyrB26 to the Function and Stability of Insulin , 2016, The Journal of Biological Chemistry.

[4]  J. Mayer,et al.  Pursuit of a perfect insulin , 2016, Nature Reviews Drug Discovery.

[5]  J. Carpenter,et al.  Characterization of Sizes of Aggregates of Insulin Analogs and the Conformations of the Constituent Protein Molecules: A Concomitant Dynamic Light Scattering and Raman Spectroscopy Study. , 2016, Journal of pharmaceutical sciences.

[6]  J. Menting,et al.  Structural Congruency of Ligand Binding to the Insulin and Insulin/Type 1 Insulin-like Growth Factor Hybrid Receptors. , 2015, Structure.

[7]  R. Bergenstal,et al.  Initiation of human regular U-500 insulin use is associated with improved glycemic control: a real-world US cohort study , 2015, BMJ Open Diabetes Research and Care.

[8]  T. Pedersen,et al.  Treatment of Diabetic Rats With Insulin or a Synthetic Insulin Receptor Agonist Peptide Leads to Divergent Metabolic Responses , 2014, Diabetes.

[9]  Brian J. Smith,et al.  Protective hinge in insulin opens to enable its receptor engagement , 2014, Proceedings of the National Academy of Sciences.

[10]  F. Ismail-Beigi,et al.  Biophysical Optimization of a Therapeutic Protein by Nonstandard Mutagenesis , 2014, The Journal of Biological Chemistry.

[11]  J. Mayer,et al.  Chemical synthesis of insulin analogs through a novel precursor. , 2014, ACS chemical biology.

[12]  D. Leroith,et al.  Insulin Receptor Phosphorylation by Endogenous Insulin or the Insulin Analog AspB10 Promotes Mammary Tumor Growth Independent of the IGF-I Receptor , 2013, Diabetes.

[13]  M. Weiss Design of ultra-stable insulin analogues for the developing world , 2013 .

[14]  U. Ribel,et al.  Insulin analog with additional disulfide bond has increased stability and preserved activity , 2013, Protein science : a publication of the Protein Society.

[15]  Andrzej M. Brzozowski,et al.  How insulin engages its primary binding site on the insulin receptor , 2013, Nature.

[16]  B. Blagoev,et al.  Agonism and Antagonism at the Insulin Receptor , 2012, PloS one.

[17]  J. Johansson,et al.  Insulin solubility transitions by pH‐dependent interactions with proinsulin C‐peptide , 2012, The FEBS journal.

[18]  Rebeccah L. Brown,et al.  Clinical Use of U-500 Regular Insulin: Review and Meta-Analysis , 2012, Journal of diabetes science and technology.

[19]  F. Ismail-Beigi,et al.  Insulin Fibrillation and Protein Design: Topological Resistance of Single-Chain Analogs to Thermal Degradation with Application to a Pump Reservoir , 2012, Journal of diabetes science and technology.

[20]  L. Sciacca,et al.  Insulin Analogs and Cancer , 2012, Front. Endocrin..

[21]  A. Palmer,et al.  Measuring steady-state and dynamic endoplasmic reticulum and Golgi Zn2+ with genetically encoded sensors , 2011, Proceedings of the National Academy of Sciences.

[22]  Randy J. Read,et al.  Overview of the CCP4 suite and current developments , 2011, Acta crystallographica. Section D, Biological crystallography.

[23]  B. Bode Comparison of pharmacokinetic properties, physicochemical stability, and pump compatibility of 3 rapid-acting insulin analogues-aspart, lispro, and glulisine. , 2011, Endocrine practice : official journal of the American College of Endocrinology and the American Association of Clinical Endocrinologists.

[24]  R. Lefkowitz,et al.  Therapeutic potential of β-arrestin- and G protein-biased agonists. , 2011, Trends in molecular medicine.

[25]  R. Tycko,et al.  An Achilles' Heel in an Amyloidogenic Protein and Its Repair , 2010, The Journal of Biological Chemistry.

[26]  Wolfgang Kabsch,et al.  Integration, scaling, space-group assignment and post-refinement , 2010, Acta crystallographica. Section D, Biological crystallography.

[27]  Vincent B. Chen,et al.  PHENIX: a comprehensive Python-based system for macromolecular structure solution , 2010, Acta crystallographica. Section D, Biological crystallography.

[28]  M. Granvik,et al.  Insulin crystallization depends on zinc transporter ZnT8 expression, but is not required for normal glucose homeostasis in mice , 2009, Proceedings of the National Academy of Sciences.

[29]  M. Oleksiewicz,et al.  MCF‐7 human mammary adenocarcinoma cells exhibit augmented responses to human insulin on a collagen IV surface , 2009, Journal of applied toxicology : JAT.

[30]  M. Weiss,et al.  Enhancing the Activity of a Protein by Stereospecific Unfolding , 2009, Journal of Biological Chemistry.

[31]  D. Cyranoski Retracted paper rattles Korean science , 2009, Nature.

[32]  L. Thim,et al.  Single chain des-(B30) insulin. Intramolecular crosslinking of insulin by trypsin catalyzed transpeptidation. , 2009, International journal of peptide and protein research.

[33]  M. Weiss,et al.  ENHANCING THE ACTIVITY OF INSULIN BY STEREOSPECIFIC UNFOLDING , 2008 .

[34]  J. Cregg,et al.  Posttransformational vector amplification in the yeast Pichia pastoris. , 2008, FEMS yeast research.

[35]  Kun Huang,et al.  Design of an Active Ultrastable Single-chain Insulin Analog , 2008, Journal of Biological Chemistry.

[36]  J. Wallace,et al.  Structure and functional analysis of the IGF‐II/IGF2R interaction , 2008, The EMBO journal.

[37]  Randy J. Read,et al.  Phaser crystallographic software , 2007, Journal of applied crystallography.

[38]  T. Bartels,et al.  Insulin Glulisine—A Comprehensive Preclinical Evaluation , 2006, International journal of toxicology.

[39]  P. Carey,et al.  Proinsulin Is Refractory to Protein Fibrillation , 2005, Journal of Biological Chemistry.

[40]  V. Besada,et al.  Multiple gene copy number enhances insulin precursor secretion in the yeast Pichia pastoris , 2005, Biotechnology Letters.

[41]  Kun Huang,et al.  Enhancing the activity of insulin at the receptor interface: crystal structure and photo-cross-linking of A8 analogues. , 2004, Biochemistry.

[42]  Gavin Brooks,et al.  Cell Cycle Control , 2004, Methods in Molecular Biology™.

[43]  Daniela Barlocco Insulin glulisine. Aventis Pharma. , 2003, Current opinion in investigational drugs.

[44]  W. Pangborn,et al.  The structure of T6 human insulin at 1.0 A resolution. , 2003, Acta crystallographica. Section D, Biological crystallography.

[45]  J. Whittaker,et al.  Structural biology of insulin and IGF1 receptors: implications for drug design , 2002, Nature Reviews Drug Discovery.

[46]  Z. Dauter,et al.  Structural origins of the functional divergence of human insulin-like growth factor-I and insulin. , 2002, Biochemistry.

[47]  Christopher M. Dobson,et al.  The protofilament structure of insulin amyloid fibrils , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[48]  Ashley J. Wilson,et al.  Insulin at pH 2: structural analysis of the conditions promoting insulin fibre formation. , 2002, Journal of molecular biology.

[49]  N. Kaarsholm,et al.  Expression of Insulin in Yeast: The Importance of Molecular Adaptation for Secretion and Conversion , 2001, Biotechnology & genetic engineering reviews.

[50]  V. Uversky,et al.  Effect of environmental factors on the kinetics of insulin fibril formation: elucidation of the molecular mechanism. , 2001, Biochemistry.

[51]  Y Wang,et al.  Human insulin from a precursor overexpressed in the methylotrophic yeast Pichia pastoris and a simple procedure for purifying the expression product. , 2001, Biotechnology and bioengineering.

[52]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[53]  S. M. Setter,et al.  Insulin Aspart: A New Rapid-Acting Insulin Analog , 2000, The Annals of pharmacotherapy.

[54]  Y. Sanejouand,et al.  Building‐block approach for determining low‐frequency normal modes of macromolecules , 2000, Proteins.

[55]  T. Kjeldsen,et al.  Yeast secretory expression of insulin precursors , 2000, Applied Microbiology and Biotechnology.

[56]  A. Saltiel,et al.  Signaling pathways in insulin action: molecular targets of insulin resistance. , 2000, The Journal of clinical investigation.

[57]  T. Kjeldsen,et al.  Secretory expression and characterization of insulin in Pichia pastoris , 1999, Biotechnology and applied biochemistry.

[58]  Y. Chiu,et al.  FDA perspective on peptide formulation and stability issues. , 1998, Journal of pharmaceutical sciences.

[59]  F. Ismail-Beigi,et al.  Glycemia-lowering effect of cobalt chloride in the diabetic rat: role of decreased gluconeogenesis. , 1998, American journal of physiology. Endocrinology and metabolism.

[60]  D. Steiner,et al.  The role of assembly in insulin's biosynthesis. , 1998, Current opinion in structural biology.

[61]  M. Weiss,et al.  Mini-proinsulin and mini-IGF-I: homologous protein sequences encoding non-homologous structures. , 1998, Journal of molecular biology.

[62]  J. Brange,et al.  Toward understanding insulin fibrillation. , 1997, Journal of pharmaceutical sciences.

[63]  M. Weiss,et al.  Mapping the functional surface of insulin by design: structure and function of a novel A-chain analogue. , 1996, Journal of molecular biology.

[64]  N. Kaarsholm,et al.  Solution structure of an engineered insulin monomer at neutral pH. , 1996, Biochemistry.

[65]  A. Stern,et al.  Structure and Dynamics of a Protein Assembly.1H-NMR Studies of the 36 kDaR6Insulin Hexamer , 1996 .

[66]  Z. X. Wang,et al.  An exact mathematical expression for describing competitive binding of two different ligands to a protein molecule , 1995, FEBS letters.

[67]  L. Schäffer,et al.  A single-chain insulin-like growth factor I/insulin hybrid binds with high affinity to the insulin receptor. , 1995, The Biochemical journal.

[68]  P. Arvan,et al.  Formation of the insulin-containing secretory granule core occurs within immature beta-granules. , 1994, The Journal of biological chemistry.

[69]  S. Shoelson,et al.  Receptor binding redefined by a structural switch in a mutant human insulin , 1994, Nature.

[70]  E J Dodson,et al.  Role of B13 Glu in insulin assembly. The hexamer structure of recombinant mutant (B13 Glu-->Gln) insulin. , 1992, Journal of molecular biology.

[71]  P. Katsoyannis,et al.  The A14 position of insulin tolerates considerable structural alterations with modest effects on the biological behavior of the hormone , 1992, Journal of protein chemistry.

[72]  B H Frank,et al.  Altering the association properties of insulin by amino acid replacement. , 1992, Protein engineering.

[73]  D. Howey,et al.  Biosynthetic Human Proinsulin: Review of Chemistry, in Vitro and in Vivo Receptor Binding, Animal and Human Pharmacology Studies, and Clinical Trial Experience , 1992, Diabetes Care.

[74]  E J Dodson,et al.  X-ray analysis of the single chain B29-A1 peptide-linked insulin molecule. A completely inactive analogue. , 1991, Journal of molecular biology.

[75]  Z. Dauter,et al.  X-ray structure of an unusual Ca2+ site and the roles of Zn2+ and Ca2+ in the assembly, stability, and storage of the insulin hexamer. , 1991, Biochemistry.

[76]  R. Mirmira,et al.  Importance of the character and configuration of residues B24, B25, and B26 in insulin-receptor interactions. , 1991, The Journal of biological chemistry.

[77]  Robert T. Sauer,et al.  Reverse hydrophobic effects relieved by amino-acid substitutions at a protein surface , 1990, Nature.

[78]  K. Makino,et al.  Cloning, nucleotide sequence, and expression of Achromobacter protease I gene. , 1989, The Journal of biological chemistry.

[79]  E. Dodson,et al.  Phenol stabilizes more helix in a new symmetrical zinc insulin hexamer , 1989, Nature.

[80]  H. Tager,et al.  Perturbation of insulin-receptor interactions by intramolecular hormone cross-linking. Analysis of relative movement among residues A1, B1, and B29. , 1989, The Journal of biological chemistry.

[81]  T L Blundell,et al.  The structure of 2Zn pig insulin crystals at 1.5 A resolution. , 1988, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

[82]  I. S. Johnson Human insulin from recombinant DNA technology. , 1983, Science.

[83]  K. Inouye,et al.  Semisynthesis and properties of some insulin analogs , 1981, Biopolymers.

[84]  D. Hodgkin,et al.  Evidence concerning insulin activity from the structure of a cross-linked derivative. , 1981, Hoppe-Seyler's Zeitschrift fur physiologische Chemie.

[85]  E. Rinderknecht,et al.  The amino acid sequence of human insulin-like growth factor I and its structural homology with proinsulin. , 1978, The Journal of biological chemistry.

[86]  D. Steiner On the Role of the Proinsulin C-peptide , 1978, Diabetes.

[87]  D. Steiner,et al.  Insulin Biosynthesis: Evidence for a Precursor , 1967, Science.

[88]  D. F. Waugh A mechanism for the formation of fibrils from protein molecules. , 1957, Journal of cellular physiology. Supplement.

[89]  M. Horne,et al.  Down-regulation of cyclin G2 by insulin, IGF-I (insulin-like growth factor 1) and X10 (AspB10 insulin): role in mitogenesis. , 2014, The Biochemical journal.

[90]  Shamim Ahmad Diabetes : an old disease, a new insight , 2012 .

[91]  Emil Ginter,et al.  Type 2 diabetes mellitus, pandemic in 21st century. , 2012, Advances in experimental medicine and biology.

[92]  D. M. Robinson,et al.  Insulin Glulisine , 2012, Drugs.

[93]  N. Seidah,et al.  Proprotein Convertases , 2011, Methods in Molecular Biology.

[94]  J. Wade,et al.  The human insulin superfamily of polypeptide hormones. , 2009, Vitamins and hormones.

[95]  R. Chance,et al.  Insulin self-association and the relationship to pharmacokinetics and pharmacodynamics. , 2001, Critical reviews in therapeutic drug carrier systems.

[96]  T. Sosnick,et al.  Application of circular dichroism to study RNA folding transitions. , 2000, Methods in enzymology.

[97]  D. Steiner,et al.  Insulin Through the Ages : Phylogeny of a Growth Promoting and Metabolic Regulatory Hormone , 2000 .

[98]  Kevin L. Shaw,et al.  Linear extrapolation method of analyzing solvent denaturation curves , 2000, Proteins.

[99]  J. Brange,et al.  Insulin formulation and delivery. , 1997, Pharmaceutical biotechnology.

[100]  A. Stern,et al.  Structure and dynamics of a protein assembly. 1H-NMR studies of the 36 kDa R6 insulin hexamer. , 1996, Journal of molecular biology.

[101]  B. Ursø,et al.  The insulin-like growth factor-I receptor. Structure, ligand-binding mechanism and signal transduction. , 1994, Hormone research.

[102]  B. Ursø,et al.  The Insulin-Like Growth Factor-I Receptor , 1994, Hormone Research.

[103]  J. Brange,et al.  Insulin structure and stability. , 1993, Pharmaceutical biotechnology.

[104]  T. Sasaoka,et al.  Receptor binding and biologic activity of biosynthetic human insulin and mini-proinsulin produced by recombinant gene technology. , 1989, Diabetes research and clinical practice.

[105]  A. King,et al.  open access to scientific and medical research Open Access Full Text Article Glargine and detemir: Safety and efficacy profiles of the long-acting basal insulin analogs Review , 2022 .