Diversity in prokaryotic glycosylation: an archaeal‐derived N‐linked glycan contains legionaminic acid

VP4, the major structural protein of the haloarchaeal pleomorphic virus, HRPV‐1, is glycosylated. To define the glycan structure attached to this protein, oligosaccharides released by β‐elimination were analysed by mass spectrometry and nuclear magnetic resonance spectroscopy. Such analyses showed that the major VP4‐derived glycan is a pentasaccharide comprising glucose, glucuronic acid, mannose, sulphated glucuronic acid and a terminal 5‐N‐formyl‐legionaminic acid residue. This is the first observation of legionaminic acid, a sialic acid‐like sugar, in an archaeal‐derived glycan structure. The importance of this residue for viral infection was demonstrated upon incubation with N‐acetylneuraminic acid, a similar monosaccharide. Such treatment reduced progeny virus production by half 4 h post infection. LC‐ESI/MS analysis confirmed the presence of pentasaccharide precursors on two different VP4‐derived peptides bearing the N‐glycosylation signal, NTT. The same sites modified by the native host, Halorubrum sp. strain PV6, were also recognized by the Haloferax volcanii N‐glycosylation apparatus, as determined by LC‐ESI/MS of heterologously expressed VP4. Here, however, the N‐linked pentasaccharide was the same as shown to decorate the S‐layer glycoprotein in this species. Hence, N‐glycosylation of the haloarchaeal viral protein, VP4, is host‐specific. These results thus present additional examples of archaeal N‐glycosylation diversity and show the ability of Archaea to modify heterologously expressed proteins.

[1]  M. Aebi,et al.  Mechanisms and principles of N-linked protein glycosylation. , 2011, Current opinion in structural biology.

[2]  S. Albers,et al.  The thermoacidophilic archaeon Sulfolobus acidocaldarius contains an unusually short, highly reduced dolichyl phosphate. , 2011, Biochimica et biophysica acta.

[3]  Z. Guan,et al.  Different routes to the same ending: comparing the N‐glycosylation processes of Haloferax volcanii and Haloarcula marismortui, two halophilic archaea from the Dead Sea , 2011, Molecular microbiology.

[4]  Z. Guan,et al.  Glyco‐engineering in Archaea: differential N‐glycosylation of the S‐layer glycoprotein in a transformed Haloferax volcanii strain , 2011, Microbial biotechnology.

[5]  Barbara Imperiali,et al.  The expanding horizons of asparagine-linked glycosylation. , 2011, Biochemistry.

[6]  Anne Dell,et al.  Similarities and Differences in the Glycosylation Mechanisms in Prokaryotes and Eukaryotes , 2011, International journal of microbiology.

[7]  Z. Konrad,et al.  Distinct glycan‐charged phosphodolichol carriers are required for the assembly of the pentasaccharide N‐linked to the Haloferax volcanii S‐layer glycoprotein , 2010, Molecular microbiology.

[8]  Jerry Eichler,et al.  Protein glycosylation in Archaea: sweet and extreme. , 2010, Glycobiology.

[9]  J. Eichler,et al.  Towards Glycoengineering in Archaea: Replacement of Haloferax volcanii AglD with Homologous Glycosyltransferases from Other Halophilic Archaea , 2010, Applied and Environmental Microbiology.

[10]  P. Hitchen,et al.  AglP is a S‐adenosyl‐L‐methionine‐dependent methyltransferase that participates in the N‐glycosylation pathway of Haloferax volcanii , 2010, Molecular microbiology.

[11]  Pentti Somerharju,et al.  New, Closely Related Haloarchaeal Viral Elements with Different Nucleic Acid Types , 2010, Journal of Virology.

[12]  Daisuke Kohda,et al.  Comparative Structural Biology of Eubacterial and Archaeal Oligosaccharyltransferases* , 2009, The Journal of Biological Chemistry.

[13]  J. Eichler,et al.  Glycosyltransferases and oligosaccharyltransferases in Archaea: putative components of the N-glycosylation pathway in the third domain of life. , 2009, FEMS microbiology letters.

[14]  E. Roine,et al.  The Single-Stranded DNA Genome of Novel Archaeal Virus Halorubrum Pleomorphic Virus 1 Is Enclosed in the Envelope Decorated with Glycoprotein Spikes , 2009, Journal of Virology.

[15]  Liu Bin,et al.  First Isolation and Identification of a Di- N -Acyl Derivative of 5,7-Diamino-3,5,7,9-tetradeoxy-L- glycero -D- galacto -non-2-ulosonic (8-Epilegionaminic) Acid , 2009 .

[16]  Julian N. Rosenberg,et al.  Structure and synthesis of polyisoprenoids used in N-glycosylation across the three domains of life. , 2009, Biochimica et biophysica acta.

[17]  Nisse Kalkkinen,et al.  An ssDNA virus infecting archaea: a new lineage of viruses with a membrane envelope , 2009, Molecular microbiology.

[18]  J. Laine,et al.  Glycomics of bone marrow-derived mesenchymal stem cells can be used to evaluate their cellular differentiation stage , 2009, Glycoconjugate Journal.

[19]  N. Sharon,et al.  Not just for Eukarya anymore: protein glycosylation in Bacteria and Archaea. , 2008, Current opinion in structural biology.

[20]  K. Jarrell,et al.  Sweet to the extreme: protein glycosylation in Archaea , 2008, Molecular microbiology.

[21]  D. Kohda,et al.  Structure‐guided identification of a new catalytic motif of oligosaccharyltransferase , 2008, The EMBO journal.

[22]  O. Medalia,et al.  Haloferax volcanii AglB and AglD are involved in N-glycosylation of the S-layer glycoprotein and proper assembly of the surface layer. , 2007, Journal of molecular biology.

[23]  D. McNally,et al.  Targeted Metabolomics Analysis of Campylobacter coli VC167 Reveals Legionaminic Acid Derivatives as Novel Flagellar Glycans* , 2007, Journal of Biological Chemistry.

[24]  V. Shepherd,et al.  Virus glycosylation: role in virulence and immune interactions , 2007, Trends in Microbiology.

[25]  J. Kelly,et al.  Identification of genes involved in the biosynthesis and attachment of Methanococcus voltae N‐linked glycans: insight into N‐linked glycosylation pathways in Archaea , 2006, Molecular microbiology.

[26]  Barbara Imperiali,et al.  Asparagine-linked protein glycosylation: from eukaryotic to prokaryotic systems. , 2006, Glycobiology.

[27]  J. Tiralongo,et al.  Sialic acid-specific lectins: occurrence, specificity and function , 2006, Cellular and Molecular Life Sciences CMLS.

[28]  D. Kelleher,et al.  An evolving view of the eukaryotic oligosaccharyltransferase. , 2006, Glycobiology.

[29]  M. Adams,et al.  Posttranslational Protein Modification in Archaea , 2005, Microbiology and Molecular Biology Reviews.

[30]  E. Swiezewska,et al.  Polyisoprenoids: structure, biosynthesis and function. , 2005, Progress in lipid research.

[31]  C. Szymanski,et al.  Protein glycosylation in bacterial mucosal pathogens , 2005, Nature Reviews Microbiology.

[32]  Anne Dell,et al.  Functional analysis of the Campylobacter jejuni N‐linked protein glycosylation pathway , 2005, Molecular microbiology.

[33]  J. Maupin-Furlow,et al.  Differential Regulation of the PanA and PanB Proteasome-Activating Nucleotidase and 20S Proteasomal Proteins of the Haloarchaeon Haloferax volcanii , 2004, Journal of bacteriology.

[34]  A. Helenius,et al.  Roles of N-linked glycans in the endoplasmic reticulum. , 2004, Annual review of biochemistry.

[35]  A. Varki,et al.  Chemical Diversity in the Sialic Acids and Related α-Keto Acids: An Evolutionary Perspective , 2002 .

[36]  Y. Mechref,et al.  Microscale nonreductive release of O-linked glycans for subsequent analysis through MALDI mass spectrometry and capillary electrophoresis. , 2001, Analytical chemistry.

[37]  U. Zähringer,et al.  Synthesis and NMR spectroscopy of nine stereoisomeric 5,7-diacetamido-3,5,7,9-tetradeoxynon-2-ulosonic acids. , 2001, Carbohydrate research.

[38]  M. Aebi,et al.  The dolichol pathway of N-linked glycosylation. , 1999, Biochimica et biophysica acta.

[39]  N. Packer,et al.  A general approach to desalting oligosaccharides released from glycoproteins , 1998, Glycoconjugate Journal.

[40]  J. Sonnenbichler,et al.  Isolation and characterization of dolichol-linked oligosaccharides from Haloferax volcanii. , 1997, Glycobiology.

[41]  E. Rietschel,et al.  The structure of the O-specific chain of Legionella pneumophila serogroup 1 lipopolysaccharide. , 1994, European journal of biochemistry.

[42]  H. Kogelberg,et al.  Studies on the three-dimensional behaviour of the selectin ligands Lewis(a) and sulphated Lewis(a) using NMR spectroscopy and molecular dynamics simulations. , 1994, Glycobiology.

[43]  F. Wieland,et al.  Primary structure of the heterosaccharide of the surface glycoprotein of Methanothermus fervidus. , 1993, The Journal of biological chemistry.

[44]  M. Dyall-Smith,et al.  HF1 and HF2: novel bacteriophages of halophilic archaea. , 1993, Virology.

[45]  M. Sumper,et al.  Drastic differences in glycosylation of related S-layer glycoproteins from moderate and extreme halophiles. , 1992, The Journal of biological chemistry.

[46]  W. Baumeister,et al.  Primary structure and glycosylation of the S-layer protein of Haloferax volcanii , 1990, Journal of bacteriology.

[47]  H. König,et al.  Uridine and dolichyl diphosphate activated oligosaccharides are intermediates in the biosynthesis of the S-layer glycoprotein of Methanothermus fervidus , 1989, Archives of Microbiology.

[48]  B. Domon,et al.  A systematic nomenclature for carbohydrate fragmentations in FAB-MS/MS spectra of glycoconjugates , 1988, Glycoconjugate Journal.

[49]  A. Shashkov,et al.  Somatic antigens of Pseudomonas aeruginosa. The structure of O-specific polysaccharide chains of the lipopolysaccharides from P. aeruginosa O5 (Lányi) and immunotype 6 (Fisher). , 1987, European journal of biochemistry.

[50]  Y. Knirel,et al.  Somatic antigens of Pseudomonas aeruginosa. The structure of O-specific polysaccharide chains of the lipopolysaccharides from P. aeruginosa O1 (Lányi), O3 (Habs), O13 and O14 (Wokatsch), and the serologically related strain NCTC 8505. , 1986, European journal of biochemistry.

[51]  R. Werczberger,et al.  Genetic transfer in Halobacterium volcanii , 1985, Journal of bacteriology.

[52]  G. Dubray,et al.  A highly sensitive periodic acid-silver stain for 1,2-diol groups of glycoproteins and polysaccharides in polyacrylamide gels. , 1982, Analytical biochemistry.

[53]  L. Leloir,et al.  Dolichol monophosphate glucose: an intermediate in glucose transfer in liver. , 1970, Proceedings of the National Academy of Sciences of the United States of America.

[54]  E. Roine,et al.  Viruses from the Hypersaline Environment , 2011 .

[55]  A. Varki,et al.  Evolution of Glycan Diversity , 2009 .

[56]  A. Varki,et al.  Chemical diversity in the sialic acids and related alpha-keto acids: an evolutionary perspective. , 2002, Chemical reviews.

[57]  N. Cianciotto Pathogenicity of Legionella pneumophila. , 2001, International journal of medical microbiology : IJMM.

[58]  W. Doolittle,et al.  Transformation methods for halophilic archaebacteria. , 1989, Canadian journal of microbiology.

[59]  F. Wieland,et al.  Structure and biosynthesis of prokaryotic glycoproteins. , 1988, Biochimie.