Cell death in planktonic, photosynthetic microorganisms

[1]  L. Passador,et al.  Cell-to-Cell Communication in Bacteria , 2005 .

[2]  Lisa C. Crossman,et al.  Enemies within , 2005, Nature reviews. Microbiology.

[3]  M. Steel,et al.  A genome phylogeny for mitochondria among alpha-proteobacteria and a predominantly eubacterial ancestry of yeast nuclear genes. , 2004, Molecular biology and evolution.

[4]  Paul G. Falkowski,et al.  The demise of the marine cyanobacterium, Trichodesmium spp., via an autocatalyzed cell death pathway , 2004 .

[5]  Debashish Bhattacharya,et al.  A molecular timeline for the origin of photosynthetic eukaryotes. , 2004, Molecular biology and evolution.

[6]  Paul G Falkowski,et al.  Shotgun Sequencing in the Sea: A Blast from the Past? , 2004, Science.

[7]  O. White,et al.  Environmental Genome Shotgun Sequencing of the Sargasso Sea , 2004, Science.

[8]  W. Martin,et al.  Endosymbiotic gene transfer: organelle genomes forge eukaryotic chromosomes , 2004, Nature Reviews Genetics.

[9]  A. Bekker,et al.  Dating the rise of atmospheric oxygen , 2004, Nature.

[10]  C. Suttle.  The significance of viruses to mortality in aquatic microbial communities , 1994, Microbial Ecology.

[11]  J. Young,et al.  Coccolithophores : from molecular processes to global impact , 2004 .

[12]  J Yuan,et al.  Caspases: an ancient cellular sword of Damocles , 2004, Cell Death and Differentiation.

[13]  L. Villarreal,et al.  T-Ag Inhibits Implantation by EC Cell Derived Embryoid Bodies , 2004, Virus Genes.

[14]  C. Delwiche,et al.  The complete mitochondrial genome sequence of the haptophyte Emiliania huxleyi and its relation to heterokonts. , 2004, DNA research : an international journal for rapid publication of reports on genes and genomes.

[15]  B. Read,et al.  Analysis of Expressed Sequence Tags from Calcifying Cells of Marine Coccolithophorid (Emiliania huxleyi) , 2004, Marine Biotechnology.

[16]  K. Rice,et al.  Death's toolbox: examining the molecular components of bacterial programmed cell death , 2003, Molecular microbiology.

[17]  Manesh Shah,et al.  Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation , 2003, Nature.

[18]  A. Knoll.  The geological consequences of evolution , 2003 .

[19]  K. Bayles.  Are the molecular strategies that control apoptosis conserved in bacteria? , 2003, Trends in microbiology.

[20]  S. Baldauf,et al.  The Deep Roots of Eukaryotes , 2003, Science.

[21]  P. Falkowski,et al.  Cell Death in the Unicellular Chlorophyte Dunaliella tertiolecta. A Hypothesis on the Evolution of Apoptosis in Higher Plants and Metazoans , 2003, Plant Physiology.

[22]  A. Knoll.  Life on a Young Planet: The First Three Billion Years of Evolution on Earth , 2003 .

[23]  Ilana Berman-Frank,et al.  Nitrogen fixation and photosynthetic oxygen evolution in cyanobacteria. , 2003, Research in microbiology.

[24]  K. Schulze-Osthoff,et al.  Many cuts to ruin: a comprehensive update of caspase substrates , 2003, Cell Death and Differentiation.

[25]  J. Peter Gogarten,et al.  Whole-Genome Analysis of Photosynthetic Prokaryotes , 2002, Science.

[26]  J. Meeks,et al.  Cellular differentiation in the cyanobacterium Nostoc punctiforme , 2002, Archives of Microbiology.

[27]  D. Schroeder,et al.  Coccolithovirus (Phycodnaviridae): Characterisation of a new large dsDNA algal virus that infects Emiliana huxleyi , 2002, Archives of Virology.

[28]  P. Falkowski.  The ocean's invisible forest. , 2002, Scientific American.

[29]  J. V. Van Etten,et al.  Phycodnaviridae– large DNA algal viruses , 2002, Archives of Virology.

[30]  R. Olson,et al.  Phytoplankton and iron limitation of photosynthetic efficiency in the Southern Ocean during late summer , 2002 .

[31]  S. Ning,et al.  Salt stress induces programmed cell death in prokaryotic organism Anabaena , 2002, Journal of applied microbiology.

[32]  Bonnie L Bassler,et al.  Small Talk Cell-to-Cell Communication in Bacteria , 2002, Cell.

[33]  M. Duszenko,et al.  A metacaspase of Trypanosoma brucei causes loss of respiration competence and clonal death in the yeast Saccharomyces cerevisiae , 2002, FEBS letters.

[34]  K. Lauber,et al.  A caspase-related protease regulates apoptosis in yeast. , 2002, Molecular cell.

[35]  E. Koonin,et al.  Origin and evolution of eukaryotic apoptosis: the bacterial connection , 2002, Cell Death and Differentiation.

[36]  J. Ameisen.  On the origin, evolution, and nature of programmed cell death: a timeline of four billion years , 2002, Cell Death and Differentiation.

[37]  G. Bratbak,et al.  Flow cytometric analysis of an Emiliana huxleyi bloom terminated by viral infection , 2002 .

[38]  P. Mlejnek,et al.  Activation of caspase-like proteases and induction of apoptosis by isopentenyladenosine in tobacco BY-2 cells , 2002, Planta.

[39]  C. Suttle,et al.  Lysogeny and Lytic Viral Production during a Bloom of the Cyanobacterium Synechococcus spp. , 2002, Microbial Ecology.

[40]  P. Petit,et al.  On the evolution of programmed cell death: apoptosis of the unicellular eukaryote Leishmania major involves cysteine proteinase activation and mitochondrion permeabilization , 2002, Cell Death and Differentiation.

[41]  S. Bertholet,et al.  Programmed cell death in the unicellular protozoan parasite Leishmania , 2002, Cell Death and Differentiation.

[42]  Brian A. Whitton,et al.  The Ecology of Cyanobacteria , 2002, Springer Netherlands.

[43]  R. Sandaa,et al.  Isolation and characterization of two viruses with large genome size infecting Chrysochromulina ericina (Prymnesiophyceae) and Pyramimonas orientalis (Prasinophyceae). , 2001, Virology.

[44]  P. Falkowski,et al.  Segregation of Nitrogen Fixation and Oxygenic Photosynthesis in the Marine Cyanobacterium Trichodesmium , 2001, Science.

[45]  L. Mcdaniel,et al.  Evaluation of Marine Bacterial Lysogens for Development of a Marine Prophage Induction Assay , 2001, Marine Biotechnology.

[46]  R. Sandaa,et al.  Population dynamics and diversity of phytoplankton, bacteria and viruses in a seawater enclosure , 2001 .

[47]  中山 二郎,et al.  米国微生物学会コンファレンス"Cell-Cell Communication in Bacteria" に出席して , 2001 .

[48]  P. Falkowski,et al.  Iron availability, cellular iron quotas, and nitrogen fixation in Trichodesmium , 2001 .

[49]  W. Dennison,et al.  Effects of Concentrated Viral Communities on Photosynthesis and Community Composition of Co-Occurring Benthic Microalgae and Phytoplankton , 2001 .

[50]  D. Liu,et al.  Induction of Caspase-Dependent Apoptosis in Cultured Cells by the Avian Coronavirus Infectious Bronchitis Virus , 2001, Journal of Virology.

[51]  A. Knoll,et al.  Morphological and ecological complexity in early eukaryotic ecosystems , 2001, Nature.

[52]  V. Skulachev.  The programmed death phenomena, aging, and the Samurai law of biology , 2001, Experimental Gerontology.

[53]  F. Chen,et al.  Distribution, Isolation, Host Specificity, and Diversity of Cyanophages Infecting Marine Synechococcus spp. in River Estuaries , 2001, Applied and Environmental Microbiology.

[54]  A. M. Chan,et al.  A NOVEL VIRUS (HaNIV) CAUSES LYSIS OF THE TOXIC BLOOM‐FORMING ALGA HETEROSIGMA AKASHIWO (RAPHIDOPHYCEAE) , 2001 .

[55]  E V Koonin,et al.  Apoptotic molecular machinery: vastly increased complexity in vertebrates revealed by genome comparisons. , 2001, Science.

[56]  E. Koonin,et al.  Horizontal gene transfer in prokaryotes: quantification and classification. , 2001, Annual review of microbiology.

[57]  An Alternative, Non-Apoptotic Form of Programmed Cell Death , 2001 .

[58]  M. Potts,et al.  The ecology of cyanobacteria: their diversity in time and space (reviewed by T. Bailey Watts) , 2001 .

[59]  D. Bredesen,et al.  An alternative, nonapoptotic form of programmed cell death. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[60]  E. Koonin,et al.  Identification of paracaspases and metacaspases: two ancient families of caspase-like proteins, one of which plays a key role in MALT lymphoma. , 2000, Molecular cell.

[61]  K. Lewis,et al.  Programmed Death in Bacteria , 2000, Microbiology and Molecular Biology Reviews.

[62]  M. Thiemens,et al.  Atmospheric influence of Earth's earliest sulfur cycle , 2000, Science.

[63]  S. Orrenius,et al.  Triggering and modulation of apoptosis by oxidative stress. , 2000, Free radical biology & medicine.

[64]  L. Villarreal,et al.  A Hypothesis for DNA Viruses as the Origin of Eukaryotic Replication Proteins , 2000, Journal of Virology.

[65]  H. Korthout,et al.  The presence and subcellular localization of caspase 3‐like proteinases in plant cells , 2000, FEBS letters.

[66]  N. Butterfield,et al.  Bangiomorpha pubescens n. gen., n. sp.: implications for the evolution of sex, multicellularity, and the Mesoproterozoic/Neoproterozoic radiation of eukaryotes , 2000, Paleobiology.

[67]  H. Ochman,et al.  Lateral gene transfer and the nature of bacterial innovation , 2000, Nature.

[68]  F. Madeo,et al.  Apoptosis in yeast – a monocellular organism exhibits altruistic behaviour , 2000, FEBS letters.

[69]  K. Wommack,et al.  Virioplankton: Viruses in Aquatic Ecosystems , 2000, Microbiology and Molecular Biology Reviews.

[70]  Curtis A. Suttle,et al.  6 – Ecological, Evolutionary, and Geochemical Consequences of Viral Infection of Cyanobacteria and Eukaryotic Algae , 2000 .

[71]  D. G. Adams,et al.  Tansley Review No. 107. Heterocyst and akinete differentiation in cyanobacteria , 1999 .

[72]  Charles F. Delwiche,et al.  Tracing the Thread of Plastid Diversity through the Tapestry of Life , 1999, The American Naturalist.

[73]  A. Kaplan,et al.  Programmed cell death of the dinoflagellate Peridinium gatunense is mediated by CO2 limitation and oxidative stress , 1999, Current Biology.

[74]  Roger E. Summons,et al.  2-Methylhopanoids as biomarkers for cyanobacterial oxygenic photosynthesis , 1999, Nature.

[75]  J. Fuhrman.  Marine viruses and their biogeochemical and ecological effects , 1999, Nature.

[76]  Temple F. Smith,et al.  The WD repeat: a common architecture for diverse functions. , 1999, Trends in biochemical sciences.

[77]  F. Azam,et al.  Accelerated dissolution of diatom silica by marine bacterial assemblages , 1999, Nature.

[78]  M. Behrenfeld,et al.  Widespread iron limitation of phytoplankton in the south pacific ocean , 1999, Science.

[79]  E. Koonin,et al.  The domains of death: evolution of the apoptosis machinery. , 1999, Trends in biochemical sciences.

[80]  K. Ohki,et al.  A possible role of temperate phage in the regulation of Trichodesmium biomass , 1999 .

[81]  N. Thornberry,et al.  Inhibition of Human Caspases by Peptide-based and Macromolecular Inhibitors* , 1998, The Journal of Biological Chemistry.

[82]  E. Lam,et al.  Caspases and programmed cell death in the hypersensitive response of plants to pathogens , 1998, Current Biology.

[83]  S. Agustí,et al.  Dissolved esterase activity as a tracer of phytoplankton lysis: Evidence of high phytoplankton lysis rates in the northwestern Mediterranean , 1998 .

[84]  P. Falkowski,et al.  Measurements of variable chlorophyll fluorescence using fast repetition rate techniques: defining methodology and experimental protocols , 1998, Biochimica et biophysica acta.

[85]  T. Ohama,et al.  Directionally Evolving Genetic Code: The UGA Codon from Stop to Tryptophan in Mitochondria , 1998, Journal of Molecular Evolution.

[86]  G. Salvesen,et al.  Properties of the caspases. , 1998, Biochimica et biophysica acta.

[87]  Y. Lazebnik,et al.  Caspases: enemies within. , 1998, Science.

[88]  P. Hearing,et al.  CHARACTERIZATION OF A LYTIC VIRUS INFECTIOUS TO THE BLOOM‐FORMING MICROALGA AUREOCOCCUS ANOPHAGEFFERENS (PELAGOPHYCEAE) , 1998 .

[89]  P. Falkowski,et al.  Biogeochemical Controls and Feedbacks on Ocean Primary Production , 1998, Science.

[90]  J. Randerson,et al.  Primary production of the biosphere: integrating terrestrial and oceanic components , 1998, Science.

[91]  Farooq Azam,et al.  Microbial Control of Oceanic Carbon Flux: The Plot Thickens , 1998, Science.

[92]  T. Georgiou,et al.  Specific peptide-activated proteolytic cleavage of Escherichia coli elongation factor Tu. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[93]  Robert Eugene Blankenship,et al.  The origin and evolution of oxygenic photosynthesis. , 1998, Trends in biochemical sciences.

[94]  A. Rosen,et al.  Sindbis Virus Induces Apoptosis through a Caspase-Dependent, CrmA-Sensitive Pathway , 1998, Journal of Virology.

[95]  P. Falkowski,et al.  Physiological stress and cell death in marine phytoplankton: Induction of proteases in response to nitrogen or light limitation , 1998 .

[96]  C. Brussaard,et al.  AUTOLYSIS KINETICS OF THE MARINE DIATOM DITYLUM BRIGHTWELLII (BACILLARIOPHYCEAE) UNDER NITROGEN AND PHOSPHORUS LIMITATION AND STARVATION 1 , 1997 .

[97]  Yuji Inagaki,et al.  A deviant mitochondrial genetic code in prymnesiophytes (yellow-algae): UGA codon for tryptophan , 1997, Current Genetics.

[98]  Thomas L. Madden,et al.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.

[99]  K. Nagasaki,et al.  Isolation of a virus infectious to the harmful bloom causing microalga Heterosigma akashiwo (Raphidophyceae) , 1997 .

[100]  G M Cohen,et al.  Caspases: the executioners of apoptosis. , 1997, The Biochemical journal.

[101]  P. Nicotera,et al.  The shape of cell death. , 1997, Biochemical and biophysical research communications.

[102]  J. Zehr,et al.  Phylogeny of cyanobacterial nifH genes: evolutionary implications and potential applications to natural assemblages. , 1997, Microbiology.

[103]  P. Branton,et al.  Regulation of apoptosis by viral gene products , 1997, Journal of virology.

[104]  L. Villarreal,et al.  On viruses, sex, and motherhood , 1997, Journal of virology.

[105]  H. D. Holland.  Evidence for Life on Earth More Than 3850 Million Years Ago , 1997, Science.

[106]  G. Bratbak,et al.  ISOLATION AND CHARACTERIZATION OF A VIRUS INFECTING PHAEOCYSTIS POUCHETII (PRYMNESIOPHYCEAE) 1 , 1996 .

[107]  G. Bratbak,et al.  Viral control of Emiliania huxleyi blooms , 1996 .

[108]  Gad,et al.  An Escherichia coli chromosomal “addiction module” regulated by 3′,5′-bispyrophosphate: A model for programmed bacterial cell death , 1996, Proceedings of the National Academy of Sciences.

[109]  H. Engelberg-Kulka,et al.  An Escherichia coli chromosomal "addiction module" regulated by guanosine [corrected] 3',5'-bispyrophosphate: a model for programmed bacterial cell death. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[110]  Yoshihiko Fujita,et al.  OCCURRENCE OF A TEMPERATE CYANOPHAGE LYSOGENIZING THE MARINE CYANOPHYTE PHORMIDIUM PERSICINUM 1 , 1996 .

[111]  C. Suttle,et al.  Evolutionary relationships among large double-stranded DNA viruses that infect microalgae and other organisms as inferred from DNA polymerase genes. , 1996, Virology.

[112]  T. Idziorek,et al.  Apoptosis in a unicellular eukaryote (Trypanosoma cruzi): implications for the evolutionary origin and role of programmed cell death in the control of cell proliferation, differentiation and survival. , 1995, Cell death and differentiation.

[113]  A. M. Chan,et al.  Fluorescently Labeled Virus Probes Show that Natural Virus Populations Can Control the Structure of Marine Microbial Communities , 1995, Applied and environmental microbiology.

[114]  R. Bak,et al.  Effects of grazing, sedimentation and phytoplankton cell lysis on the structure of a coastal pelagic food web , 1995 .

[115]  J. Palmer,et al.  Phylogenetic analysis of tufA sequences indicates a cyanobacterial origin of all plastids. , 1995, Molecular phylogenetics and evolution.

[116]  A. M. Chan,et al.  Viruses infecting the marine Prymnesiophyte Chrysochromulina spp.: isolation, preliminary characterization and natural abundance , 1995 .

[117]  M. Yarmolinsky,et al.  Programmed cell death in bacterial populations , 1995, Science.

[118]  E. Cosper,et al.  Isolation of Virus Capable of Lysing the Brown Tide Microalga, Aureococcus anophagefferens , 1994, Science.

[119]  B. Leadbeater,et al.  The Haptophyte algae , 1994 .

[120]  P. Falkowski,et al.  Iron limitation of phytoplankton photosynthesis in the equatorial Pacific Ocean , 1994, Nature.

[121]  Junying Yuan,et al.  Induction of apoptosis in fibroblasts by IL-1β-converting enzyme, a mammalian homolog of the C. elegans cell death gene ced-3 , 1993, Cell.

[122]  Shai Shaham,et al.  The C. elegans cell death gene ced-3 encodes a protein similar to mammalian interleukin-1β-converting enzyme , 1993, Cell.

[123]  I. Joint,et al.  Isolation and Molecular Characterization of Five Marine Cyanophages Propagated on Synechococcus sp. Strain WH7803 , 1993, Applied and environmental microbiology.

[124]  G. Bratbak,et al.  Viral mortality of the marine alga Emiliania huxleyi (Haptophyceae) and termination of algal blooms , 1993 .

[125]  Curtis A. Suttle,et al.  Marine cyanophages infecting oceanic and coastal strains of Synechococcus: abundance, morphology, cross-infectivity and growth characteristics , 1993 .

[126]  R. Bak,et al.  Lysis-induced decline of a phaeocystis spring bloom and coupling with the microbial foodweb , 1992 .

[127]  K. O. Elliston,et al.  A novel heterodimeric cysteine protease is required for interleukin-1βprocessing in monocytes , 1992, Nature.

[128]  J. Barber.  The photosystems: structure, function and molecular biology. , 1992 .

[129]  M. Cottrell,et al.  Use of Ultrafiltration To Isolate Viruses from Seawater Which Are Pathogens of Marine Phytoplankton , 1991, Applied and environmental microbiology.

[130]  M. Cottrell,et al.  Wide-spread occurrence and clonal variation in viruses which cause lysis of a cosmopolitan, eukaryotic marine phytoplankter Micromonas pusilla , 1991 .

[131]  Curtis A. Suttle,et al.  Infection of phytoplankton by viruses and reduction of primary productivity , 1990, Nature.

[132]  Jed A. Fuhrman,et al.  Viral mortality of marine bacteria and cyanobacteria , 1990, Nature.

[133]  H. Thierstein,et al.  Plio-Pleistocene calcareous plankton biochronology , 1989 .

[134]  A. Alldredge,et al.  Direct observations of the mass flocculation of diatom blooms: characteristics, settling velocities and formation of diatom aggregates , 1989 .

[135]  Alan R. Longhurst,et al.  The biological pump: profiles of plankton production and consumption in the upper ocean , 1989 .

[136]  G. Jasmin.  Kinetics and patterns of necrosis. , 1988, Methods and achievements in experimental pathology.

[137]  M. Pace,et al.  Bacterial production in fresh and saltwater ecosystems: a cross-system overview , 1988 .

[138]  F. Taylor.  An overview of the status of evolutionary cell symbiosis theories. , 1987, Annals of the New York Academy of Sciences.

[139]  A. Mitsui,et al.  Strategy by which nitrogen-fixing unicellular cyanobacteria grow photoautotrophically , 1986, Nature.

[140]  H. Hoppe.  Significance of exoenzymatic activities in the ecology of brackish water: measurements by means of methylumbelliferyl-substrates , 1983 .

[141]  J. G. Field,et al.  The Ecological Role of Water-Column Microbes in the Sea* , 1983 .

[142]  F. Taylor,et al.  A virus which lyses the marine nanoflagellate Micromonas pusilla , 1979, Nature.

[143]  F. Taylor,et al.  Symbionticism revisited: a discussion of the evolutionary impact of intracellular symbioses , 1979, Proceedings of the Royal Society of London. Series B. Biological Sciences.

[144]  A. Walsby.  The properties and buoyancy-providing role of gas vacuoles in Trichodesmium Ehrenberg , 1978 .

[145]  A. Wyllie,et al.  Apoptosis: A Basic Biological Phenomenon with Wide-ranging Implications in Tissue Kinetics , 1972, British Journal of Cancer.

[146]  W. Hamilton.  The genetical evolution of social behaviour. I. , 1964, Journal of theoretical biology.

[147]  A. C. Redfield.  The biological control of chemical factors in the environment. , 1960, Science progress.