Genome-Wide SNP Validation and Mantle Tissue Transcriptome Analysis in the Silver-Lipped Pearl Oyster, Pinctada maxima
暂无分享,去创建一个
[1] Zhifeng Gu,et al. Characterization of the Pearl Oyster (Pinctada martensii) Mantle Transcriptome Unravels Biomineralization Genes , 2013, Marine Biotechnology.
[2] D. Grattapaglia,et al. Genetic diversity and assessment of 23 microsatellite markers for parentage testing of Santa Inês hair sheep in Brazil. , 2012, Genetics and molecular research : GMR.
[3] D. Jerry,et al. Donor-oyster derived heritability estimates and the effect of genotype × environment interaction on the production of pearl quality traits in the silver-lip pearl oyster, Pinctada maxima , 2012 .
[4] K. Zenger,et al. Transcriptome analysis of biomineralisation-related genes within the pearl sac: host and donor oyster contribution. , 2012, Marine genomics.
[5] Hideo Aoki,et al. Draft Genome of the Pearl Oyster Pinctada fucata: A Platform for Understanding Bivalve Biology , 2012, DNA research : an international journal for rapid publication of reports on genes and genomes.
[6] K. Lindblad-Toh,et al. A High Density SNP Array for the Domestic Horse and Extant Perissodactyla: Utility for Association Mapping, Genetic Diversity, and Phylogeny Studies , 2012, PLoS genetics.
[7] J. Sese,et al. Genome structure analysis of molluscs revealed whole genome duplication and lineage specific repeat variation. , 2011, Gene.
[8] Xianhu Zheng,et al. A genetic linkage map and comparative genome analysis of common carp (Cyprinus carpio L.) using microsatellites and SNPs , 2011, Molecular Genetics and Genomics.
[9] Kaoru Maeyama,et al. Deep Sequencing of ESTs from Nacreous and Prismatic Layer Producing Tissues and a Screen for Novel Shell Formation-Related Genes in the Pearl Oyster , 2011, PloS one.
[10] K. Zenger,et al. Diagnostic genetic markers unravel the interplay between host and donor oyster contribution in cultured pearl formation , 2011 .
[11] D. Patel,et al. Cloning, expression and characterization of l-asparaginase from Withania somnifera L. for large scale production , 2011, 3 Biotech.
[12] M. DePristo,et al. A framework for variation discovery and genotyping using next-generation DNA sequencing data , 2011, Nature Genetics.
[13] Sigbjørn Lien,et al. Genotype calling and mapping of multisite variants using an Atlantic salmon iSelect SNP array , 2011, Bioinform..
[14] Yuan Da-hui. Cloning and characterization of nacre-related genes in silver-lip pearl oyster Pinctada maxima , 2011 .
[15] Sophie Arnaud-Haond,et al. Evolutionary Patterns in Pearl Oysters of the Genus Pinctada (Bivalvia: Pteriidae) , 2011, Marine Biotechnology.
[16] R. Andreassen,et al. Targeted SNP discovery in Atlantic salmon (Salmo salar) genes using a 3'UTR-primed SNP detection approach , 2010, BMC Genomics.
[17] Benjamin Marie,et al. Transcriptome and proteome analysis of Pinctada margaritifera calcifying mantle and shell: focus on biomineralization , 2010, BMC Genomics.
[18] M. Dupont-Nivet,et al. Population and family growth response to different rearing location, heritability estimates and genotype×environment interaction in the silver-lip pearl oyster (Pinctada maxima) , 2010 .
[19] D. Jerry,et al. Xenografts and pearl production in two pearl oyster species, P. maxima and P. margaritifera: effect on pearl quality and a key to understanding genetic contribution , 2010 .
[20] Yuan Da-hui. Cloning,expression and characterization of Pinctada maxima mantle gene 1 , 2010 .
[21] S. Lien,et al. Evaluation of an Atlantic salmon SNP chip as a genomic tool for the application in a Tasmanian Atlantic salmon (Salmo salar) breeding population , 2010 .
[22] Martin Hartmann,et al. Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities , 2009, Applied and Environmental Microbiology.
[23] Denis Milan,et al. Design of a High Density SNP Genotyping Assay in the Pig Using SNPs Identified and Characterized by Next Generation Sequencing Technology , 2009, PloS one.
[24] John Parkinson,et al. The conservation and evolutionary modularity of metabolism , 2009, Genome Biology.
[25] Gonçalo R. Abecasis,et al. The Sequence Alignment/Map format and SAMtools , 2009, Bioinform..
[26] D. Jerry,et al. High levels of intra-specific variation in the NG repeat region of the Pinctada maxima N66 organic matrix protein. , 2009 .
[27] Timothy P. L. Smith,et al. Development and Characterization of a High Density SNP Genotyping Assay for Cattle , 2009, PloS one.
[28] D. Jerry,et al. Decreased genetic diversity and a reduced effective population size in cultured silver-lipped pearl oysters (Pinctada maxima) , 2009 .
[29] Patrick Wincker,et al. Generation and analysis of a 29,745 unique Expressed Sequence Tags from the Pacific oyster (Crassostrea gigas) assembled into a publicly accessible database: the GigasDatabase , 2009, BMC Genomics.
[30] Z. Sha,et al. Quality assessment parameters for EST-derived SNPs from catfish , 2008, BMC Genomics.
[31] P. Southgate. Pearl oyster culture , 2008 .
[32] J. Taylor,et al. Chapter 8 – Pearl Production , 2008 .
[33] Paul C. Southgate,et al. The pearl oyster , 2008 .
[34] C. Tisdell,et al. Economics of Pearl Farming , 2008 .
[35] Michiko Norizuki,et al. Distribution and Function of the Nacrein-Related Proteins Inferred from Structural Analysis , 2008, Marine Biotechnology.
[36] D. Jerry,et al. Population genetics of a marine bivalve, Pinctada maxima, throughout the Indo‐Australian Archipelago shows differentiation and decreased diversity at range limits , 2007, Molecular ecology.
[37] S. Kalinowski,et al. Revising how the computer program cervus accommodates genotyping error increases success in paternity assignment , 2007, Molecular ecology.
[38] K. Gunderson,et al. Whole genome genotyping technologies on the BeadArray™ platform , 2007 .
[39] Zhanjiang Liu. Aquaculture genome technologies , 2007 .
[40] W. Barris,et al. QC analyses of SNP array data: experiences from a large population of dairy sires with 23.8 million data points. , 2007 .
[41] Adam Godzik,et al. Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences , 2006, Bioinform..
[42] Rongqing Zhang,et al. cDNA cloning and characterization of a novel calmodulin‐like protein from pearl oyster Pinctada fucata , 2005, The FEBS journal.
[43] James R. Knight,et al. Genome sequencing in microfabricated high-density picolitre reactors , 2005, Nature.
[44] Juan Miguel García-Gómez,et al. BIOINFORMATICS APPLICATIONS NOTE Sequence analysis Manipulation of FASTQ data with Galaxy , 2005 .
[45] Ximing Guo,et al. Chromosomal Rearrangement in Pectinidae Revealed by rRNA Loci and Implications for Bivalve Evolution , 2004, The Biological Bulletin.
[46] H. Nagasawa,et al. Characterization of Prismalin-14, a novel matrix protein from the prismatic layer of the Japanese pearl oyster (Pinctada fucata). , 2004, The Biochemical journal.
[47] I. Sarashina,et al. Structure and expression of an unusually acidic matrix protein of pearl oyster shells. , 2004, Biochemical and biophysical research communications.
[48] T. Wetter,et al. Using the miraEST assembler for reliable and automated mRNA transcript assembly and SNP detection in sequenced ESTs. , 2004, Genome research.
[49] L. Xie,et al. A novel matrix protein participating in the nacre framework formation of pearl oyster, Pinctada fucata. , 2003, Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology.
[50] S. Mann. Biomineralization: Principles and Concepts in Bioinorganic Materials Chemistry , 2002 .
[51] R. Takagi,et al. Complementary DNA Cloning and Characterization of Pearlin, a New Class of Matrix Protein in the Nacreous Layer of Oyster Pearls , 2000, Marine Biotechnology.
[52] T. Samata,et al. Molecular mechanism of the nacreous layer formation in Pinctada maxima. , 2000, Biochemical and biophysical research communications.
[53] T. Samata,et al. A new matrix protein family related to the nacreous layer formation of Pinctada fucata , 1999, FEBS letters.
[54] T. Fujikawa,et al. Structures of mollusc shell framework proteins , 1997, Nature.
[55] T Morita,et al. A carbonic anhydrase from the nacreous layer in oyster pearls. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[56] M. Fussenegger,et al. Cloning and characterization of the , 1996 .
[57] S. Heinemann,et al. Cloning and characterization of chi-1: a developmentally regulated member of a novel class of the ionotropic glutamate receptor family , 1995, The Journal of neuroscience : the official journal of the Society for Neuroscience.
[58] E. Myers,et al. Basic local alignment search tool. , 1990, Journal of molecular biology.
[59] J. Sambrook,et al. Molecular Cloning: A Laboratory Manual , 2001 .