A fluorescence anisotropy method for measuring protein concentration in complex cell culture media.

The rapid, quantitative analysis of the complex cell culture media used in biopharmaceutical manufacturing is of critical importance. Requirements for cell culture media composition profiling, or changes in specific analyte concentrations (e.g. amino acids in the media or product protein in the bioprocess broth) often necessitate the use of complicated analytical methods and extensive sample handling. Rapid spectroscopic methods like multi-dimensional fluorescence (MDF) spectroscopy have been successfully applied for the routine determination of compositional changes in cell culture media and bioprocess broths. Quantifying macromolecules in cell culture media is a specific challenge as there is a need to implement measurements rapidly on the prepared media. However, the use of standard fluorescence spectroscopy is complicated by the emission overlap from many media components. Here, we demonstrate how combining anisotropy measurements with standard total synchronous fluorescence spectroscopy (TSFS) provides a rapid, accurate quantitation method for cell culture media. Anisotropy provides emission resolution between large and small fluorophores while TSFS provides a robust measurement space. Model cell culture media was prepared using yeastolate (2.5 mg mL(-1)) spiked with bovine serum albumin (0 to 5 mg mL(-1)). Using this method, protein emission is clearly discriminated from background yeastolate emission, allowing for accurate bovine serum albumin (BSA) quantification over a 0.1 to 4.0 mg mL(-1) range with a limit of detection (LOD) of 13.8 μg mL(-1).

[1]  Spectral diagnostics of the interaction between pyridoxine hydrochloride and bovine serum albumin in vitro , 2008, Molecular Biology Reports.

[2]  Brian A. Mazzeo,et al.  From molecular dynamics to fluorescence anisotropy of fluorophores bound to oriented structures , 2013, J. Comput. Phys..

[3]  Fluoroprofile, a fluorescence‐based assay for rapid and sensitive quantitation of proteins in solution , 2005, Proteomics.

[4]  Albert Sickmann,et al.  Silver‐ and Coomassie‐staining protocols: Detection limits and compatibility with ESI MS , 2007, Electrophoresis.

[5]  F. G. Sánchez,et al.  Simultaneous determination of glycols based on fluorescence anisotropy. , 2007 .

[6]  Geoffrey L. Francis,et al.  Albumin and mammalian cell culture: implications for biotechnology applications , 2010, Cytotechnology.

[7]  Amine Kamen,et al.  Characterization of yeastolate fractions that promote insect cell growth and recombinant protein production , 2007, Cytotechnology.

[8]  Alan G. Ryder,et al.  Using surface‐enhanced Raman scattering (SERS) and fluorescence spectroscopy for screening yeast extracts, a complex component of cell culture media , 2012 .

[9]  M. Barkley,et al.  Toward understanding tryptophan fluorescence in proteins. , 1998, Biochemistry.

[10]  Chung‐Sheng Lin,et al.  A modified coomassie brilliant blue G 250 staining method for the detection of chitinase activity and molecular weight after polyacrylamide gel electrophoresis. , 2008, Journal of bioscience and bioengineering.

[11]  Alan G. Ryder,et al.  Prediction of cell culture media performance using fluorescence spectroscopy. , 2010, Analytical chemistry.

[12]  Alan G. Ryder,et al.  A stainless steel multi-well plate (SS-MWP) for high-throughput Raman analysis of dilute solutions , 2010 .

[13]  Alan T. Bull,et al.  CHO cell growth and recombinant interferon-γ production: Effects of BSA, Pluronic and lipids , 2004, Cytotechnology.

[14]  Ann L. Lee,et al.  An automated homogeneous method for quantifying polysorbate using fluorescence polarization. , 2005, Analytical biochemistry.

[15]  Ashok Kumar Mishra,et al.  Recent developments in multi-component synchronous fluorescence scan analysis , 2002 .

[16]  J. Salmon,et al.  Formation of micella containing solubilized sterols during rehydration of active dry yeasts improves their fermenting capacity. , 2005, Journal of agricultural and food chemistry.

[17]  Alan G. Ryder,et al.  Rapid quantification of tryptophan and tyrosine in chemically defined cell culture media using fluorescence spectroscopy. , 2012, Journal of pharmaceutical and biomedical analysis.

[18]  Alan G. Ryder,et al.  A Fluorescence Analysis of ANS Bound to Bovine Serum Albumin: Binding Properties Revisited by Using Energy Transfer , 2008, Journal of Fluorescence.

[19]  F. Bright Fluorescence Anisotropy Selective Technique (FAST): A New Approach to Multicomponent Fluorimetric Analysis , 1988 .

[20]  Raman spectroscopy for the determination of photosensitizer localization in cells , 1997 .

[21]  S. Anandan,et al.  Binding of serum albumins with bioactive substances – Nanoparticles to drugs , 2013 .

[22]  B. Valeur,et al.  RESOLUTION OF THE FLUORESCENCE EXCITATION SPECTRUM OF INDOLE INTO THE 1La AND 1Lb EXCITATION BANDS * , 1977, Photochemistry and photobiology.

[23]  S. Nordeen,et al.  Fluorescence anisotropy microplate assay for analysis of steroid receptor-DNA interactions. , 2004, BioTechniques.

[24]  Alan G. Ryder,et al.  Comprehensive, quantitative bioprocess productivity monitoring using fluorescence EEM spectroscopy and chemometrics. , 2014, The Analyst.

[25]  Thomas Scheper,et al.  Two‐Dimensional Fluorescence Spectroscopy: A New Tool for On‐Line Bioprocess Monitoring , 1998, Biotechnology progress.

[26]  Excitation Emission Matrix of Spin-coated Polymeric Thin Films and its Application to Polarized Fluorescence , 2006 .

[27]  Alan G. Ryder,et al.  Fluorescence Excitation—Emission Matrix (EEM) Spectroscopy for Rapid Identification and Quality Evaluation of Cell Culture Media Components , 2011, Applied spectroscopy.

[28]  Rasmus Bro,et al.  Real-time monitoring and chemical profiling of a cultivation process , 2006 .

[29]  Lawrence W. Dick,et al.  Investigation of proteins and peptides from yeastolate and subsequent impurity testing of drug product , 2009, Biotechnology progress.

[30]  V. Levi,et al.  Determination of the molecular size of BSA by fluorescence anisotropy , 2003 .

[31]  J. Owicki,et al.  Fluorescence Polarization and Anisotropy in High Throughput Screening: Perspectives and Primer , 2000, Journal of biomolecular screening.

[32]  S. Eremin,et al.  Long-wavelength fluorescence polarization immunoassay for surfactant determination. , 2007, Talanta.

[33]  C. Yengo,et al.  Fluorescence anisotropy and resonance energy transfer: powerful tools for measuring real time protein dynamics in a physiological environment. , 2010, Current opinion in pharmacology.

[34]  P. Bojarski,et al.  Excitation energy transport between the ionic forms of rhodamine B in viscous solutions , 1998 .

[35]  Randall D. Reif,et al.  Exploring biomolecular interactions by single-molecule fluorescence , 2007 .

[36]  J. Albani,et al.  Fluorescence spectral resolution of tryptophan residues in bovine and human serum albumins. , 2009, Journal of pharmaceutical and biomedical analysis.

[37]  O. Mullins,et al.  MOLECULAR SIZE AND STRUCTURE OF ASPHALTENES , 2001 .

[38]  Rasmus Bro,et al.  Multi-way Analysis with Applications in the Chemical Sciences , 2004 .

[39]  D. Millar,et al.  Time-resolved fluorescence spectroscopy. , 1996, Current opinion in structural biology.

[40]  Joaquim M. S. Cabral,et al.  Real-time bioprocess monitoring: Part I: In situ sensors , 2006 .

[41]  P. Morton,et al.  Progress in Biomedical Optics and Imaging , 2003 .

[42]  J. Lakowicz Principles of fluorescence spectroscopy , 1983 .

[43]  Romà Tauler,et al.  Multivariate Curve Resolution (MCR) from 2000: Progress in Concepts and Applications , 2006 .

[44]  J. Andre,et al.  Investigation of acetone-butanol-ethanol fermentation by fluorescence , 1994, Applied Microbiology and Biotechnology.

[45]  K. Hachiya,et al.  Fluorescence behavior of tryptophan residues of bovine and human serum albumins in ionic surfactant solutions: A comparative study of the two and one tryptophan(s) of bovine and human albumins , 1996, Journal of protein chemistry.

[46]  R. Bro PARAFAC. Tutorial and applications , 1997 .

[47]  Carsten Lindemann,et al.  2-Dimensional fluorescence spectroscopy for on-line bioprocess monitoring , 1998 .

[48]  Alan G. Ryder Assessing the Maturity of Crude Petroleum Oils Using Total Synchronous Fluorescence Scan Spectra , 2004, Journal of Fluorescence.

[49]  K. Schwamborn,et al.  Protein quantification and its tolerance for different interfering reagents using the BCA-method with regard to 2D SDS PAGE. , 2005, Journal of biochemical and biophysical methods.

[50]  J. Markwell,et al.  Assays for Determination of Protein Concentration , 2007, Current protocols in protein science.

[51]  D. Kirwan,et al.  Correlation of Fermentation Yield with Yeast Extract Composition as Characterized by Near‐Infrared Spectroscopy , 1998, Biotechnology progress.

[52]  Wolfgang Lindner,et al.  Quantification of immunoglobulin G and characterization of process related impurities using coupled protein A and size exclusion high performance liquid chromatography. , 2010, Journal of chromatography. A.

[53]  Alan G. Ryder,et al.  A rapid fluorescence based method for the quantitative analysis of cell culture media photo-degradation. , 2014, Analytica chimica acta.

[54]  Raymond F. Chen Fluorescence Quantum Yield Measurements: Vitamin B6 Compounds , 1965, Science.

[55]  M. Ameloot,et al.  Fluorescence anisotropy measurements in solution: Methods and reference materials (IUPAC Technical Report) , 2013 .

[56]  Oliver Spadiut,et al.  On-line multiple component analysis for efficient quantitative bioprocess development. , 2013, Journal of biotechnology.

[57]  Carl-Fredrik Mandenius,et al.  On-line multi-analyzer monitoring of biomass, glucose and acetate for growth rate control of a Vibrio cholerae fed-batch cultivation. , 2005, Journal of biotechnology.

[58]  S. Krämer,et al.  Evaluation of fluorescence anisotropy to assess drug-lipid membrane partitioning. , 2012, Journal of pharmaceutical and biomedical analysis.

[59]  V. Hanko,et al.  Determination of amino acids in cell culture and fermentation broth media using anion-exchange chromatography with integrated pulsed amperometric detection. , 2004, Analytical biochemistry.

[60]  Gary M. Hieftje,et al.  New Instrumentation for Use in Excitation-Emission Fluorescence-Polarization Measurements , 1993 .