Patterns of Hybrid Seed Inviability in the Mimulus guttatus sp. Complex Reveal a Potential Role of Parental Conflict in Reproductive Isolation

[1]  Michele R. Dudash,et al.  The case for the continued use of the genus name Mimulus for all monkeyflowers , 2019, TAXON.

[2]  J. Willis,et al.  Hybrid Inviability and Differential Submergence Tolerance Drive Habitat Segregation Between Two Congeneric Monkeyflowers , 2019, The Bulletin of the Ecological Society of America.

[3]  J. Willis,et al.  Hybrid inviability and differential submergence tolerance drive habitat segregation between two congeneric monkeyflowers. , 2018, Ecology.

[4]  Jonathan Wright,et al.  Intersexual conflict over seed size is stronger in more outcrossed populations of a mixed-mating plant , 2018, Proceedings of the National Academy of Sciences.

[5]  A. Sweigart,et al.  A two‐locus hybrid incompatibility is widespread, polymorphic, and active in natural populations of Mimulus * , 2018, Evolution; international journal of organic evolution.

[6]  T. Lenormand,et al.  Dividing a Maternal Pie among Half-Sibs: Genetic Conflicts and the Control of Resource Allocation to Seeds in Maize , 2018, The American Naturalist.

[7]  J. Willis,et al.  Dissecting the role of a large chromosomal inversion in life history divergence throughout the Mimulus guttatus species complex , 2018, Molecular ecology.

[8]  Emmanuel Paradis,et al.  ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R , 2018, Bioinform..

[9]  M. Lascoux,et al.  Paternally expressed imprinted genes associate with hybridization barriers in Capsella , 2018, Nature Plants.

[10]  J. Willis,et al.  Major QTL controls adaptation to serpentine soils in Mimulus guttatus , 2018, bioRxiv.

[11]  M. Paris,et al.  Incidence and developmental timing of endosperm failure in post-zygotic isolation between wild tomato lineages , 2018, Annals of botany.

[12]  J. Good,et al.  Rapid neo-sex chromosome evolution and incipient speciation in a major forest pest , 2017, Nature Communications.

[13]  A. Sweigart,et al.  Gene duplicates cause hybrid lethality between sympatric species of Mimulus , 2017, bioRxiv.

[14]  Karen B Barnard-Kubow,et al.  Variation in reproductive isolation across a species range , 2017, Ecology and evolution.

[15]  J. Willis,et al.  Differential Adaptation to a Harsh Granite Outcrop Habitat between Sympatric Mimulus Species , 2016, bioRxiv.

[16]  Katrine N. Bjerkan,et al.  Endosperm-based hybridization barriers explain the pattern of gene flow between Arabidopsis lyrata and Arabidopsis arenosa in Central Europe , 2017, Proceedings of the National Academy of Sciences.

[17]  J. Willis,et al.  Population structure and local selection yield high genomic variation in Mimulus guttatus , 2017, Molecular ecology.

[18]  J. Good,et al.  Genomic imprinting, disrupted placental expression, and speciation , 2016, Evolution; international journal of organic evolution.

[19]  A. Case,et al.  Selfish evolution of cytonuclear hybrid incompatibility in Mimulus , 2016, Proceedings of the Royal Society B: Biological Sciences.

[20]  Austin G. Garner,et al.  Genetic loci with parent-of-origin effects cause hybrid seed lethality in crosses between Mimulus species. , 2016, The New phytologist.

[21]  A. Angert,et al.  The scale of local adaptation in Mimulus guttatus: comparing life history races, ecotypes, and populations. , 2016, The New phytologist.

[22]  A. Sweigart,et al.  Reproductive isolation and introgression between sympatric Mimulus species , 2016, Molecular ecology.

[23]  C. Köhler,et al.  Endosperm‐based postzygotic hybridization barriers: developmental mechanisms and evolutionary drivers , 2016, Molecular ecology.

[24]  J. Willis,et al.  Disruption of endosperm development is a major cause of hybrid seed inviability between Mimulus guttatus and M. nudatus , 2015, bioRxiv.

[25]  C. Köhler,et al.  Paternally expressed imprinted genes establish postzygotic hybridization barriers in Arabidopsis thaliana , 2015, eLife.

[26]  M. Lenhard,et al.  Divergent sorting of a balanced ancestral polymorphism underlies the establishment of gene-flow barriers in Capsella , 2015, Nature Communications.

[27]  Austin G. Garner,et al.  Genetic loci with parent of origin effects cause hybrid seed lethality between Mimulus species , 2015, bioRxiv.

[28]  C. Köhler,et al.  Non-reciprocal Interspecies Hybridization Barriers in the Capsella Genus Are Established in the Endosperm , 2015, PLoS genetics.

[29]  D. Lowry,et al.  Genomic studies on the nature of species: adaptation and speciation in Mimulus , 2015, Molecular ecology.

[30]  A. Twyford,et al.  Adaptive divergence in the monkey flower Mimulus guttatus is maintained by a chromosomal inversion , 2015, Evolution; international journal of organic evolution.

[31]  J. Kelly,et al.  Centromere‐associated meiotic drive and female fitness variation in Mimulus , 2015, Evolution; international journal of organic evolution.

[32]  B. Blackman,et al.  The extent and genetic basis of phenotypic divergence in life history traits in Mimulus guttatus , 2014, Molecular ecology.

[33]  Anders Albrechtsen,et al.  ANGSD: Analysis of Next Generation Sequencing Data , 2014, BMC Bioinformatics.

[34]  J. Good,et al.  Parent‐of‐origin growth effects and the evolution of hybrid inviability in dwarf hamsters , 2014, Evolution; international journal of organic evolution.

[35]  J. Willis,et al.  Speciation on a local geographic scale: the evolution of a rare rock outcrop specialist in Mimulus , 2014, Philosophical Transactions of the Royal Society B: Biological Sciences.

[36]  D. Bates,et al.  Fitting Linear Mixed-Effects Models Using lme4 , 2014, 1406.5823.

[37]  M. Arnegard,et al.  Genetics of ecological divergence during speciation , 2014, Nature.

[38]  Lex E. Flagel,et al.  Speciation and Introgression between Mimulus nasutus and Mimulus guttatus , 2013, bioRxiv.

[39]  Alexey Siretskiy,et al.  An imprinted gene underlies postzygotic reproductive isolation in Arabidopsis thaliana. , 2013, Developmental cell.

[40]  Angel Amores,et al.  Stacks: an analysis tool set for population genomics , 2013, Molecular ecology.

[41]  Y. Willi.  The Battle of the Sexes over Seed Size: Support for Both Kinship Genomic Imprinting and Interlocus Contest Evolution , 2013, The American Naturalist.

[42]  K. Wright,et al.  Indirect Evolution of Hybrid Lethality Due to Linkage with Selected Locus in Mimulus guttatus , 2013, PLoS biology.

[43]  M. Peterson,et al.  Niche partitioning between close relatives suggests trade-offs between adaptation to local environments and competition , 2013, Ecology and evolution.

[44]  R. White,et al.  The Anatomy and Occurrence of Foliar Nectaries in Cyathea (Cyatheaceae) , 2012 .

[45]  Kevin W Eliceiri,et al.  NIH Image to ImageJ: 25 years of image analysis , 2012, Nature Methods.

[46]  D. M. Castillo,et al.  Evolutionary Implications of Mechanistic Models of TE-Mediated Hybrid Incompatibility , 2012, International journal of evolutionary biology.

[47]  Gonçalo R. Abecasis,et al.  The variant call format and VCFtools , 2011, Bioinform..

[48]  Klaus Peter Schliep,et al.  phangorn: phylogenetic analysis in R , 2010, Bioinform..

[49]  Sanford Weisberg,et al.  An R Companion to Applied Regression , 2010 .

[50]  J. Willis,et al.  A Widespread Chromosomal Inversion Polymorphism Contributes to a Major Life-History Transition, Local Adaptation, and Reproductive Isolation , 2010, PLoS biology.

[51]  M. DePristo,et al.  The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. , 2010, Genome research.

[52]  J. Willis,et al.  Geographical variation in postzygotic isolation and its genetic basis within and between two Mimulus species , 2010, Philosophical Transactions of the Royal Society B: Biological Sciences.

[53]  R. Martienssen.  Heterochromatin, small RNA and post-fertilization dysgenesis in allopolyploid and interploid hybrids of Arabidopsis. , 2010, The New phytologist.

[54]  C. Köhler,et al.  The impact of the triploid block on the origin and evolution of polyploid plants. , 2010, Trends in genetics : TIG.

[55]  D. Salt,et al.  Genetic and physiological basis of adaptive salt tolerance divergence between coastal and inland Mimulus guttatus. , 2009, The New phytologist.

[56]  Gonçalo R. Abecasis,et al.  The Sequence Alignment/Map format and SAMtools , 2009, Bioinform..

[57]  Steven Henikoff,et al.  Extensive Demethylation of Repetitive Elements During Seed Development Underlies Gene Imprinting , 2009, Science.

[58]  Richard Durbin,et al.  Sequence analysis Fast and accurate short read alignment with Burrows – Wheeler transform , 2009 .

[59]  K. Wright,et al.  The strength and genetic basis of reproductive isolating barriers in flowering plants , 2008, Philosophical Transactions of the Royal Society B: Biological Sciences.

[60]  J. Willis,et al.  Hybrid Male Sterility in Mimulus (Phrymaceae) is Associated with a Geographically Restricted Mitochondrial Rearrangement , 2008, Evolution; international journal of organic evolution.

[61]  H. Dickinson,et al.  When genomes collide: aberrant seed development following maize interploidy crosses. , 2008, Annals of botany.

[62]  K. Wright,et al.  Mimulus is an emerging model system for the integration of ecological and genomic studies , 2008, Heredity.

[63]  D. Weigel,et al.  Hybrid necrosis: autoimmunity as a potential gene-flow barrier in plant species , 2007, Nature Reviews Genetics.

[64]  P. Vrana.  GENOMIC IMPRINTING AS A MECHANISM OF REPRODUCTIVE ISOLATION IN MAMMALS , 2007 .

[65]  J. Willis,et al.  ECOLOGICAL DIVERGENCE ASSOCIATED WITH MATING SYSTEM CAUSES NEARLY COMPLETE REPRODUCTIVE ISOLATION BETWEEN SYMPATRIC MIMULUS SPECIES , 2007, Evolution; international journal of organic evolution.

[66]  J. Willis,et al.  NATURAL VARIATION FOR A HYBRID INCOMPATIBILITY BETWEEN TWO SPECIES OF MIMULUS , 2007, Evolution; international journal of organic evolution.

[67]  J. Willis,et al.  DIVERGENT SELECTION ON FLOWERING TIME CONTRIBUTES TO LOCAL ADAPTATION IN MIMULUS GUTTATUS POPULATIONS , 2006, Evolution; international journal of organic evolution.

[68]  J. Willis,et al.  A Simple Genetic Incompatibility Causes Hybrid Male Sterility in Mimulus , 2006, Genetics.

[69]  Luca Comai,et al.  The advantages and disadvantages of being polyploid , 2005, Nature Reviews Genetics.

[70]  Y. Brandvain,et al.  Divergent Mating Systems and Parental Conflict as a Barrier to Hybridization in Flowering Plants , 2005, The American Naturalist.

[71]  J. Willis,et al.  Transmission Ratio Distortion in Intraspecific Hybrids of Mimulus guttatus , 2005, Genetics.

[72]  D. J. Funk,et al.  REPRODUCTIVE ISOLATION CAUSED BY NATURAL SELECTION AGAINST IMMIGRANTS FROM DIVERGENT HABITATS , 2005 .

[73]  D. J. Funk,et al.  REPRODUCTIVE ISOLATION CAUSED BY NATURAL SELECTION AGAINST IMMIGRANTS FROM DIVERGENT HABITATS , 2005 .

[74]  Benjamin M. Fitzpatrick,et al.  RATES OF EVOLUTION OF HYBRID INVIABILITY IN BIRDS AND MAMMALS , 2004, Evolution; international journal of organic evolution.

[75]  R. Horres,et al.  Genome size variation among accessions of Arabidopsis thaliana. , 2004, Annals of botany.

[76]  H. Himmelbauer,et al.  Divergent genetic and epigenetic post‐zygotic isolation mechanisms in Mus and Peromyscus , 2004, Journal of evolutionary biology.

[77]  D. Schemske,et al.  Allele substitution at a flower colour locus produces a pollinator shift in monkeyflowers , 2003, Nature.

[78]  D. Schemske,et al.  COMPONENTS OF REPRODUCTIVE ISOLATION BETWEEN THE MONKEYFLOWERS MIMULUS LEWISII AND M. CARDINALIS (PHRYMACEAE) , 2003, Evolution; international journal of organic evolution.

[79]  J. Willis,et al.  MINOR QUANTITATIVE TRAIT LOCI UNDERLIE FLORAL TRAITS ASSOCIATED WITH MATING SYSTEM DIVERGENCE IN MIMULUS , 2002, Evolution; international journal of organic evolution.

[80]  P. Tiffin,et al.  Asymmetrical crossing barriers in angiosperms , 2001, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[81]  Michael Lynch,et al.  The Origin of Interspecific Genomic Incompatibility via Gene Duplication , 2000, The American Naturalist.

[82]  J. Fossella,et al.  Genetic and epigenetic incompatibilities underlie hybrid dysgenesis in Peromyscus , 2000, Nature Genetics.

[83]  M. Macnair,et al.  Factors affecting the co-existence of the serpentine endemic Mimulus nudatus Curran and its presumed progenitor, Mimulus guttatus Fischer ex DC , 2000 .

[84]  H. Dickinson,et al.  Parent-of-origin effects on seed development in Arabidopsis thaliana. , 1998, Development.

[85]  D. Galbraith,et al.  Analysis of Nuclear Dna Content and Ploidy in Higher Plants Analysis of Somatic Dna Content, Ploidy, and Cell-cycle Status of Plant Tissues Using a Laser-based Flow Cytometer Nucleic Acid Analysis , 2022 .

[86]  D. Haig,et al.  Parent-Specific Gene Expression and the Triploid Endosperm , 1989, The American Naturalist.

[87]  B. Lin,et al.  Ploidy barrier to endosperm development in maize. , 1984, Genetics.

[88]  E. Charnov.  Simultaneous hermaphroditism and sexual selection. , 1979, Proceedings of the National Academy of Sciences of the United States of America.

[89]  A. Wilson,et al.  Two types of molecular evolution. Evidence from studies of interspecific hybridization. , 1974, Proceedings of the National Academy of Sciences of the United States of America.

[90]  R. Trivers.  Parent-Offspring Conflict , 1974 .

[91]  A. Grant.  A Monograph of the Genus Mimulus , 1924 .

[92]  R Core Team,et al.  R: A language and environment for statistical computing. , 2014 .

[93]  G. Nesom.  Taxonomy of Erythranthe sect. Simiola (Phrymaceae) in the USA and Mexico , 2012 .

[94]  S. J. Peloquin,et al.  The significance of genic balance to endosperm development in interspecific crosses , 2004, Theoretical and Applied Genetics.

[95]  A. Wilson,et al.  Slow evolutionary loss of the potential for interspecific hybridization in birds: a manifestation of slow regulatory evolution. , 1975, Proceedings of the National Academy of Sciences of the United States of America.