Enhancer-driven transcriptional regulation is a potential key determinant for human visceral and subcutaneous adipocytes.
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[1] K. Maedler,et al. Hippo Signaling: Key Emerging Pathway in Cellular and Whole-Body Metabolism , 2018, Trends in Endocrinology & Metabolism.
[2] Jonathan M. Cairns,et al. Dynamic Rewiring of Promoter-Anchored Chromatin Loops during Adipocyte Differentiation. , 2017, Molecular cell.
[3] Michael C. Ostrowski,et al. The ETS family of oncogenic transcription factors in solid tumours , 2017, Nature Reviews Cancer.
[4] Weiqun Peng,et al. MLL3/MLL4 are required for CBP/p300 binding on enhancers and super-enhancer formation in brown adipogenesis , 2017, Nucleic acids research.
[5] L. Opitz,et al. SRF and MKL1 Independently Inhibit Brown Adipogenesis , 2017, PloS one.
[6] C. Lindgren,et al. Sexual dimorphisms in genetic loci linked to body fat distribution , 2017, Bioscience reports.
[7] Wei Xie,et al. Comparative Transcriptomic and Epigenomic Analyses Reveal New Regulators of Murine Brown Adipogenesis , 2016, PLoS genetics.
[8] P. Gunaratne,et al. PPARγ agonists promote differentiation of cancer stem cells by restraining YAP transcriptional activity , 2016, Oncotarget.
[9] S. Cinti,et al. Convertible visceral fat as a therapeutic target to curb obesity , 2016, Nature Reviews Drug Discovery.
[10] M. van Engeland,et al. The emerging role of GATA transcription factors in development and disease , 2016, Expert Reviews in Molecular Medicine.
[11] D. Clegg,et al. The sexual dimorphism of obesity , 2015, Molecular and Cellular Endocrinology.
[12] E. Hoffman,et al. An analysis of DNA methylation in human adipose tissue reveals differential modification of obesity genes before and after gastric bypass and weight loss , 2015, Genome Biology.
[13] Kun-Liang Guan,et al. The emerging roles of YAP and TAZ in cancer , 2015, Nature Reviews Cancer.
[14] S. Mandrup,et al. Browning of human adipocytes requires KLF11 and reprogramming of PPARγ superenhancers , 2015, Genes & development.
[15] W. Huber,et al. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 , 2014, Genome Biology.
[16] D. Clegg,et al. Obesity and cancer—mechanisms underlying tumour progression and recurrence , 2014, Nature Reviews Endocrinology.
[17] Fidel Ramírez,et al. deepTools: a flexible platform for exploring deep-sequencing data , 2014, Nucleic Acids Res..
[18] Kazuto Nakamura,et al. Adipokines: a link between obesity and cardiovascular disease. , 2014, Journal of cardiology.
[19] S. Fried,et al. Deconstructing the roles of glucocorticoids in adipose tissue biology and the development of central obesity. , 2014, Biochimica et biophysica acta.
[20] L. Ivashkiv,et al. Regulation of type I interferon responses , 2013, Nature Reviews Immunology.
[21] A. James,et al. Review of Signaling Pathways Governing MSC Osteogenic and Adipogenic Differentiation , 2013, Scientifica.
[22] D. Carey,et al. Gene expression profiling in subcutaneous, visceral, and epigastric adipose tissues of patients with extreme obesity , 2013, International Journal of Obesity.
[23] Xiaoxiang Hu,et al. Lats2 Modulates Adipocyte Proliferation and Differentiation via Hippo Signaling , 2013, PloS one.
[24] J. Schmid,et al. The complexity of NF-κB signaling in inflammation and cancer , 2013, Molecular Cancer.
[25] Kinyui A. Lo,et al. Turning WAT into BAT: a review on regulators controlling the browning of white adipocytes , 2013, Bioscience reports.
[26] J. Ringe,et al. Reverse Differentiation as a Gene Filtering Tool in Genome Expression Profiling of Adipogenesis for Fat Marker Gene Selection and Their Analysis , 2013, PloS one.
[27] Kun-Liang Guan,et al. Protein kinase A activates the Hippo pathway to modulate cell proliferation and differentiation. , 2013, Genes & development.
[28] M. Pan,et al. NFAT gene family in inflammation and cancer. , 2013, Current molecular medicine.
[29] A. Pobbati,et al. Emerging roles of TEAD transcription factors and its coactivators in cancers , 2013, Cancer biology & therapy.
[30] Data production leads,et al. An integrated encyclopedia of DNA elements in the human genome , 2012 .
[31] S. Aerts,et al. i-cisTarget: an integrative genomics method for the prediction of regulatory features and cis-regulatory modules , 2012, Nucleic acids research.
[32] Saeed Tavazoie,et al. Analysis of gene networks in white adipose tissue development reveals a role for ETS2 in adipogenesis , 2011, Development.
[33] H. Aburatani,et al. Global Mapping of Cell Type–Specific Open Chromatin by FAIRE-seq Reveals the Regulatory Role of the NFI Family in Adipocyte Differentiation , 2011, PLoS genetics.
[34] Clifford A. Meyer,et al. Cistrome: an integrative platform for transcriptional regulation studies , 2011, Genome Biology.
[35] Bin Zhao,et al. The Hippo pathway in organ size control, tissue regeneration and stem cell self-renewal , 2011, Nature Cell Biology.
[36] K. Clément,et al. An early inflammatory gene profile in visceral adipose tissue in children. , 2011, International journal of pediatric obesity : IJPO : an official journal of the International Association for the Study of Obesity.
[37] S. Ghosh,et al. NF-κB, inflammation, and metabolic disease. , 2011, Cell metabolism.
[38] Z. Kováčová,et al. Worsening of obesity and metabolic status yields similar molecular adaptations in human subcutaneous and visceral adipose tissue: decreased metabolism and increased immune response. , 2010, Journal of Clinical Endocrinology and Metabolism.
[39] R. Young,et al. Histone H3K27ac separates active from poised enhancers and predicts developmental state , 2010, Proceedings of the National Academy of Sciences.
[40] Gary D Bader,et al. Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation , 2010, PloS one.
[41] Eric S. Lander,et al. Comparative Epigenomic Analysis of Murine and Human Adipogenesis , 2010, Cell.
[42] T. Mikkelsen,et al. The NIH Roadmap Epigenomics Mapping Consortium , 2010, Nature Biotechnology.
[43] S. Mandrup,et al. PPARγ in adipocyte differentiation and metabolism – Novel insights from genome‐wide studies , 2010, FEBS letters.
[44] Kevin Y. Lee,et al. Adipose Depots Possess Unique Developmental Gene Signatures , 2010, Obesity.
[45] Cory Y. McLean,et al. GREAT improves functional interpretation of cis-regulatory regions , 2010, Nature Biotechnology.
[46] M. Ibrahim. Subcutaneous and visceral adipose tissue: structural and functional differences , 2010, Obesity reviews : an official journal of the International Association for the Study of Obesity.
[47] Jan Nedergaard,et al. Chronic Peroxisome Proliferator-activated Receptor γ (PPARγ) Activation of Epididymally Derived White Adipocyte Cultures Reveals a Population of Thermogenically Competent, UCP1-containing Adipocytes Molecularly Distinct from Classic Brown Adipocytes* , 2009, The Journal of Biological Chemistry.
[48] Cole Trapnell,et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome , 2009, Genome Biology.
[49] Nathaniel D. Heintzman,et al. Histone modifications at human enhancers reflect global cell-type-specific gene expression , 2009, Nature.
[50] Clifford A. Meyer,et al. Model-based Analysis of ChIP-Seq (MACS) , 2008, Genome Biology.
[51] B. Staels,et al. PPAR agonists: multimodal drugs for the treatment of type-2 diabetes. , 2007, Best practice & research. Clinical endocrinology & metabolism.
[52] I. Graef,et al. Role of Transcription Factor NFAT in Glucose and Insulin Homeostasis , 2006, Molecular and Cellular Biology.
[53] A. Shuldiner,et al. Identification of omentin as a novel depot-specific adipokine in human adipose tissue: possible role in modulating insulin action. , 2006, American journal of physiology. Endocrinology and metabolism.
[54] Daniel J. Blankenberg,et al. Galaxy: a platform for interactive large-scale genome analysis. , 2005, Genome research.
[55] Pablo Tamayo,et al. Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[56] Thomas Benjamin,et al. TAZ, a Transcriptional Modulator of Mesenchymal Stem Cell Differentiation , 2005, Science.
[57] P. Scherer,et al. Adipose tissue, inflammation, and cardiovascular disease. , 2005, Circulation research.
[58] Jean YH Yang,et al. Bioconductor: open software development for computational biology and bioinformatics , 2004, Genome Biology.
[59] E. Cameron,et al. The Runx genes: lineage-specific oncogenes and tumor suppressors , 2004, Oncogene.
[60] G. Barish,et al. PPARs and the complex journey to obesity , 2004, Nature Medicine.
[61] Gordon K Smyth,et al. Statistical Applications in Genetics and Molecular Biology Linear Models and Empirical Bayes Methods for Assessing Differential Expression in Microarray Experiments , 2011 .
[62] P. Shannon,et al. Cytoscape: a software environment for integrated models of biomolecular interaction networks. , 2003, Genome research.
[63] Rafael A Irizarry,et al. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. , 2003, Biostatistics.
[64] Tom H. Pringle,et al. The human genome browser at UCSC. , 2002, Genome research.
[65] A. Sharrocks. The ETS-domain transcription factor family , 2001, Nature Reviews Molecular Cell Biology.
[66] G. Bray,et al. Contributions of total body fat, abdominal subcutaneous adipose tissue compartments, and visceral adipose tissue to the metabolic complications of obesity. , 2001, Metabolism: clinical and experimental.
[67] Q. Tong,et al. Function of GATA transcription factors in preadipocyte-adipocyte transition. , 2000, Science.
[68] Roy Garcia,et al. STATs in oncogenesis , 2000, Oncogene.
[69] B. Spiegelman,et al. Identification of a potent adipocyte-specific enhancer: involvement of an NF-1-like factor. , 1991, Genes & development.
[70] Liqiong Wu,et al. Effect of TEAD4 on multilineage differentiation of muscle-derived stem cells. , 2018, American journal of translational research.
[71] W. Willett,et al. Global obesity: trends, risk factors and policy implications , 2013, Nature Reviews Endocrinology.
[72] Thomas R. Gingeras,et al. STAR: ultrafast universal RNA-seq aligner , 2013, Bioinform..
[73] Steven R Smith,et al. Distinct developmental signatures of human abdominal and gluteal subcutaneous adipose tissue depots. , 2013, The Journal of clinical endocrinology and metabolism.
[74] Karen Gallagher-Dorval,et al. Body mass index-independent inflammation in omental adipose tissue associated with insulin resistance in morbid obesity. , 2011, Surgery for obesity and related diseases : official journal of the American Society for Bariatric Surgery.
[75] Xiying Wu,et al. Adipogenic differentiation of adipose-derived stem cells. , 2011, Methods in molecular biology.
[76] K. Fujiwara,et al. Serum response factor: master regulator of the actin cytoskeleton and contractile apparatus. , 2007, American journal of physiology. Cell physiology.