Wolf phase tomography (WPT) of transparent structures using partially coherent illumination

In 1969, Emil Wolf proposed diffraction tomography using coherent holographic imaging to extract 3D information from transparent, inhomogeneous objects. In the same era, the Wolf equations were first used to describe the propagation correlations associated with partially coherent fields. Combining these two concepts, we present Wolf phase tomography (WPT), which is a method for performing diffraction tomography using partially coherent fields. WPT reconstruction works directly in the space–time domain, without the need for Fourier transformation, and decouples the refractive index (RI) distribution from the thickness of the sample. We demonstrate the WPT principle using the data acquired by a quantitative-phase-imaging method that upgrades an existing phase-contrast microscope by introducing controlled phase shifts between the incident and scattered fields. The illumination field in WPT is partially spatially coherent (emerging from a ring-shaped pupil function) and of low temporal coherence (white light), and as such, it is well suited for the Wolf equations. From three intensity measurements corresponding to different phase-contrast frames, the 3D RI distribution is obtained immediately by computing the Laplacian and second time derivative of the measured complex correlation function. We validate WPT with measurements of standard samples (microbeads), spermatozoa, and live neural cultures. The high throughput and simplicity of this method enables the study of 3D, dynamic events in living cells across the entire multiwell plate, with an RI sensitivity on the order of 10 −5 . A scheme for determining the three-dimensional refractive index distribution of transparent structures could prove useful for monitoring morphological changes in living cells. Xi Chen and coworkers from the University of Illinois in the USA say that their technique, called Wolf Phase Tomography (WPT), has the advantages of simple sample preparation, high throughput and also high sensitivity (refractive index variations on the order of 10 -5 can be detected). The team analyzed several samples using WPT including a suspension of 2-µm polystyrene microspheres in immersion oil, sperm cells and neurons. The approach makes use of an adapted phase-contrast microscope and partially coherent illumination (a ring-shaped white light source). Refractive index mapping of biological cells and tissue is useful for the study of cancer and cellular transport and mitosis.

[1]  Alan C. Bovik,et al.  Missing Cone Of Frequencies And Low-Pass Distortion In Three-Dimensional Microscopic Images , 1988 .

[2]  C. Fang-Yen,et al.  Tomographic phase microscopy , 2008, Nature Methods.

[3]  L. Mandel,et al.  Coherence Properties of Optical Fields , 1965 .

[4]  Mor Habaza,et al.  Tomographic phase microscopy with 180° rotation of live cells in suspension by holographic optical tweezers. , 2015, Optics letters.

[5]  G. Popescu,et al.  Correlation-induced spectral changes in tissues. , 2011, Optics letters.

[6]  D Zicha,et al.  Dynamics of fibroblast spreading. , 1995, Journal of cell science.

[7]  Zhuo Wang,et al.  Spatial light interference tomography (SLIT) , 2011, Optics express.

[8]  D. Holdstock Past, present--and future? , 2005, Medicine, conflict, and survival.

[9]  A. Ozcan,et al.  Deep learning enables cross-modality super-resolution in fluorescence microscopy , 2018, Nature Methods.

[10]  L. Waller,et al.  Multi-layer Born multiple-scattering model for 3D phase microscopy , 2020 .

[11]  R. Barer Interference Microscopy and Mass Determination , 1952, Nature.

[12]  E. Cuche,et al.  Measurement of the integral refractive index and dynamic cell morphometry of living cells with digital holographic microscopy. , 2005, Optics express.

[13]  Taean Chang,et al.  Deep learning-based optical field screening for robust optical diffraction tomography , 2019, Scientific Reports.

[14]  K. Nugent,et al.  Noninterferometric phase imaging with partially coherent light , 1998 .

[15]  Christian Depeursinge,et al.  Quantitative phase imaging in biomedicine , 2018, Nature Photonics.

[16]  G. Popescu Quantitative Phase Imaging of Cells and Tissues , 2011 .

[17]  Gabriel Popescu,et al.  Synthetic aperture tomographic phase microscopy for 3D imaging of live cells in translational motion. , 2008, Optics express.

[18]  J. Guck,et al.  3D correlative single-cell imaging utilizing fluorescence and refractive index tomography , 2021 .

[19]  S. Gygi,et al.  Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[20]  Y. Peter,et al.  On-chip refractive index cytometry for whole-cell deformability discrimination. , 2019, Lab on a chip.

[21]  P. Marquet,et al.  Marker-free phase nanoscopy , 2013, Nature Photonics.

[22]  C. Fang-Yen,et al.  Tomographic phase microscopy , 2008, Nature Methods.

[23]  E. Wolf Three-dimensional structure determination of semi-transparent objects from holographic data , 1969 .

[24]  Qionghai Dai,et al.  Point spread function for diffuser cameras based on wave propagation and projection model. , 2019, Optics express.

[25]  Olga Korotkova,et al.  Phase structuring of 2D complex coherence states. , 2019, Optics letters.

[26]  Yongkeun Park,et al.  Refractive index maps and membrane dynamics of human red blood cells parasitized by Plasmodium falciparum , 2008, Proceedings of the National Academy of Sciences.

[27]  Francisco E. Robles,et al.  Molecular imaging true-colour spectroscopic optical coherence tomography. , 2011, Nature photonics.

[28]  H. Pham,et al.  Diffraction phase microscopy with white light. , 2012, Optics letters.

[29]  Laura Waller,et al.  Learned reconstructions for practical mask-based lensless imaging , 2019, Optics express.

[30]  K. Badizadegan,et al.  Live cell refractometry using microfluidic devices. , 2006, Optics letters.

[31]  Mingguang Shan,et al.  Refractive index variance of cells and tissues measured by quantitative phase imaging. , 2017, Optics express.

[32]  Gabriel Popescu,et al.  Disorder strength measured by quantitative phase imaging as intrinsic cancer marker in fixed tissue biopsies , 2018, PloS one.

[33]  Chau-Jern Cheng,et al.  Integrated dual-tomography for refractive index analysis of free-floating single living cell with isotropic superresolution , 2018, Scientific Reports.

[34]  Shikhar Uttam,et al.  Early Prediction of Cancer Progression by Depth-Resolved Nanoscale Mapping of Nuclear Architecture from Unstained Tissue Specimens. , 2015, Cancer research.

[35]  P. Marquet,et al.  Living specimen tomography by digital holographic microscopy: morphometry of testate amoeba. , 2006, Optics express.

[36]  S. Jacques,et al.  Measurement of single cell refractive index, dry mass, volume, and density using a transillumination microscope. , 2012, Physical review letters.

[37]  V. Backman,et al.  Partial-wave microscopic spectroscopy detects subwavelength refractive index fluctuations: an application to cancer diagnosis. , 2009, Optics letters.

[38]  Jong Chul Ye,et al.  Real-time Visualization of 3-d Dynamic Microscopic Objects Using Optical Diffraction Tomography References and Links , 2022 .

[39]  YongKeun Park,et al.  Holotomography: refractive index as an intrinsic imaging contrast for 3-D label-free live cell imaging , 2017, bioRxiv.

[40]  Olga Korotkova,et al.  Optical beam propagation in soft anisotropic biological tissues , 2018, OSA Continuum.

[41]  Zhuo Wang,et al.  Tissue refractive index as marker of disease. , 2011, Journal of biomedical optics.

[42]  Olga Korotkova,et al.  Light scintillation in soft biological tissues , 2018, Waves in Random and Complex Media.

[43]  Natan T. Shaked,et al.  Rapid 3D Refractive‐Index Imaging of Live Cells in Suspension without Labeling Using Dielectrophoretic Cell Rotation , 2016, Advanced science.

[44]  H. G. Davies,et al.  Interference Microscopy and Mass Determination , 1952, Nature.

[45]  Gabriel Popescu,et al.  Real-time halo correction in phase contrast imaging , 2017, bioRxiv.

[46]  Barry R. Masters,et al.  Quantitative Phase Imaging of Cells and Tissues , 2012 .

[47]  J. Rogers,et al.  Spatial light interference microscopy (SLIM) , 2010, IEEE Photonic Society 24th Annual Meeting.

[48]  Jindong Tian,et al.  Quantitative refractive index distribution of single cell by combining phase-shifting interferometry and AFM imaging , 2017, Scientific Reports.

[49]  S. D. Babacan,et al.  White-light diffraction tomography of unlabelled live cells , 2014, Nature Photonics.

[50]  Pasquale Memmolo,et al.  Tomographic flow cytometry by digital holography , 2016, Light: Science & Applications.

[51]  P. H. Yap,et al.  Cell refractive index for cell biology and disease diagnosis: past, present and future. , 2016, Lab on a chip.

[52]  J. Bertolotti,et al.  Non-invasive imaging through opaque scattering layers , 2012, Nature.

[53]  YongKeun Park,et al.  Quantitative phase imaging unit. , 2014, Optics letters.

[54]  Tan H. Nguyen,et al.  Gradient light interference microscopy for 3D imaging of unlabeled specimens , 2017, Nature Communications.

[55]  Dimitri Van De Ville,et al.  Three-dimensional solid texture analysis in biomedical imaging: Review and opportunities , 2014, Medical Image Anal..

[56]  Pasquale Memmolo,et al.  3D morphometry of red blood cells by digital holography , 2014, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[57]  Jochen Guck,et al.  Three‐dimensional correlative single‐cell imaging utilizing fluorescence and refractive index tomography , 2017, Journal of biophotonics.

[58]  K. Toutouzas,et al.  Complex refractive index of normal and malignant human colorectal tissue in the visible and near‐infrared , 2017, Journal of biophotonics.

[59]  Valery V Tuchin,et al.  Refractive index of adipose tissue and lipid droplet measured in wide spectral and temperature ranges. , 2018, Applied optics.

[60]  R. Brand,et al.  Quantification of nanoscale nuclear refractive index changes during the cell cycle. , 2011, Journal of biomedical optics.

[61]  P. H. Yap,et al.  Determining refractive index of single living cell using an integrated microchip , 2007 .

[62]  Yongkeun Park,et al.  Holotomography: Refractive Index as an Intrinsic Imaging Contrast for 3-D Label-Free Live Cell Imaging. , 2021, Advances in experimental medicine and biology.

[63]  Björn Kemper,et al.  Tomographic phase microscopy of living three-dimensional cell cultures , 2014, Journal of biomedical optics.