A Novel Statistical Approach for Ocean Colour Estimation of Inherent Optical Properties and Cyanobacteria Abundance in Optically Complex Waters

Eutrophication is an increasing problem in coastal waters of the Baltic Sea. Moreover, algal blooms, which occur every summer in the Gulf of Gdansk can deleteriously impact human health, the aquatic environment, and economically important fisheries, tourism, and recreation industries. Traditional laboratory-based techniques for water monitoring are expensive and time consuming, which usually results in limited numbers of observations and discontinuity in space and time. The use of hyperspectral radiometers for coastal water observation provides the potential for more detailed remote optical monitoring. A statistical approach to develop local models for the estimation of optically significant components from in situ measured hyperspectral remote sensing reflectance in case 2 waters is presented in this study. The models, which are based on empirical orthogonal function (EOF) analysis and stepwise multilinear regression, allow for the estimation of parameters strongly correlated with phytoplankton (pigment concentration, absorption coefficient) and coloured detrital matter abundance (absorption coefficient) directly from reflectance spectra measured in situ. Chlorophyll a concentration, which is commonly used as a proxy for phytoplankton biomass, was retrieved with low error (median percent difference, MPD = 17%, root mean square error RMSE = 0.14 in log10 space) and showed a high correlation with chlorophyll a measured in situ (R = 0.84). Furthermore, phycocyanin and phycoerythrin, both characteristic pigments for cyanobacteria species, were also retrieved reliably from reflectance with MPD = 23%, RMSE = 0.23, R2 = 0.77 and MPD = 24%, RMSE = 0.15, R2 = 0.74, respectively. The EOF technique proved to be accurate in the derivation of the absorption spectra of phytoplankton and coloured detrital matter (CDM), with R2 (?) above 0.83 and RMSE around 0.10. The approach was also applied to satellite multispectral remote sensing reflectance data, thus allowing for improved temporal and spatial resolution compared with the in situ measurements. The EOF method tested on simulated Medium Resolution Imaging Spectrometer (MERIS) or Ocean and Land Colour Instrument (OLCI) data resulted in RMSE = 0.16 for chl-a and RMSE = 0.29 for phycocyanin. The presented methods, applied to both in situ and satellite data, provide a powerful tool for coastal monitoring and management.

[1]  P Jeremy Werdell,et al.  Generalized ocean color inversion model for retrieving marine inherent optical properties. , 2013, Applied optics.

[2]  Jaume Piera,et al.  Cluster analysis of hyperspectral optical data for discriminating phytoplankton pigment assemblages in the open ocean , 2011 .

[3]  J. Mueller,et al.  Ocean color spectra measured off the Oregon coast: characteristic vectors. , 1976, Applied optics.

[4]  George A. Jackson,et al.  Effects of phytoplankton community on production, size, and export of large aggregates: A world‐ocean analysis , 2009 .

[5]  H. Mazur-Marzec,et al.  The potential causes of cyanobacterial blooms in Baltic Sea estuaries , 2007 .

[6]  Thomas M. Smith,et al.  Reconstruction of Historical Sea Surface Temperatures Using Empirical Orthogonal Functions , 1996 .

[7]  Prieur,et al.  Analysis of variations in ocean color’ , 2000 .

[8]  David A. Siegel,et al.  Carbon‐based ocean productivity and phytoplankton physiology from space , 2005 .

[9]  Marcel Babin,et al.  Relating phytoplankton photophysiological properties to community structure on large scales , 2008 .

[10]  H. Mazur-Marzec,et al.  Occurrence of cyanobacteria and cyanotoxin in the Southern Baltic Proper. Filamentous cyanobacteria versus single-celled picocyanobacteria , 2012, Hydrobiologia.

[11]  Rüdiger Röttgers,et al.  Measurement of light absorption by aquatic particles: improvement of the quantitative filter technique by use of an integrating sphere approach. , 2012, Applied optics.

[12]  C. Donlon,et al.  The Global Monitoring for Environment and Security (GMES) Sentinel-3 mission , 2012 .

[13]  Ewa Jarosz,et al.  The hydrological and hydrochemical division of the surface waters in the Gulf of Gdansk , 1998 .

[14]  Monika Woźniak,et al.  Comparison of satellite chlorophyll a algorithms for the Baltic Sea , 2014 .

[15]  Dennis A. Hansell,et al.  Global distribution and dynamics of colored dissolved and detrital organic materials , 2002 .

[16]  A. Gitelson,et al.  Assessing the potential of SeaWiFS and MODIS for estimating chlorophyll concentration in turbid productive waters using red and near-infrared bands , 2005 .

[17]  Stefan G. H. Simis,et al.  Remote sensing of the cyanobacterial pigment phycocyanin in turbid inland water , 2005 .

[18]  H. Bouman,et al.  Dependence of light-saturated photosynthesis on temperature and community structure , 2005 .

[19]  F. Muller‐Karger,et al.  Comparison of ship and satellite bio-optical measurements on the continental margin of the NE Gulf of Mexico , 2003 .

[20]  Piotr Kowalczuk,et al.  Modeling absorption by CDOM in the Baltic Sea from season, salinity and chlorophyll , 2006 .

[21]  T. Platt,et al.  Detection of phytoplankton pigments from ocean color: improved algorithms. , 1994, Applied optics.

[22]  Astrid Bracher,et al.  Estimation of relative phycoerythrin concentrations from hyperspectral underwater radiance measurements––A statistical approach , 2013 .

[23]  Stelvio Tassan,et al.  An alternative approach to absorption measurements of aquatic particles retained on filters , 1995 .

[24]  Paul Tett,et al.  Seasonal changes in colour ratios and optically active contituents in the optical Case-2 waters of the Menai Strait, North Wales , 2000 .

[25]  John R. Moisan,et al.  An inverse modeling approach to estimating phytoplankton pigment concentrations from phytoplankton absorption spectra , 2011 .

[26]  H. Gordon,et al.  Remote Assessment of Ocean Color for Interpretation of Satellite Visible Imagery: A Review , 1983 .

[27]  Z. Lee,et al.  Retrieval of phytoplankton and colored detrital matter absorption coefficients with remote sensing reflectance in an ultraviolet band. , 2015, Applied optics.

[28]  Antonio Ruiz-Verdú,et al.  An evaluation of algorithms for the remote sensing of cyanobacterial biomass , 2008 .

[29]  D. Bryant The Photoregulated Expression of Multiple Phycocyanin Species , 1981 .

[30]  Hugo Sarmento,et al.  Use of marker pigments and functional groups for assessing the status of phytoplankton assemblages in lakes , 2008, Journal of Applied Phycology.

[31]  H. Claustre,et al.  Relationships between the surface concentration of particulate organic carbon and optical properties in the eastern South Pacific and eastern Atlantic Oceans , 2007 .

[32]  R. Majchrowski,et al.  SatBałtyk – A Baltic environmental satellite remote sensing system – an ongoing project in Poland. Part 2: Practical applicability and preliminary results* , 2011 .

[33]  R. Majchrowski,et al.  SatBałtyk – A Baltic environmental satellite remote sensing system – an ongoing project in Poland. Part 1: Assumptions, scope and operating range , 2011 .

[34]  R. Preisendorfer,et al.  Principal Component Analysis in Meteorology and Oceanography , 1988 .

[35]  F. H. Farmer,et al.  Extraction, identification, and quantitation of phycobiliprotein pigments from phototrophic plankton , 1984 .

[36]  D. Mishra,et al.  Retrieving absorption coefficients of multiple phytoplankton pigments from hyperspectral remote sensing reflectance measured over cyanobacteria bloom waters , 2016 .

[37]  Rüdiger Röttgers,et al.  Using empirical orthogonal functions derived from remote-sensing reflectance for the prediction of phytoplankton pigment concentrations , 2015 .

[38]  L. Prieur,et al.  Analysis of variations in ocean color1 , 1977 .

[39]  P. Tett,et al.  Using bio-optics to investigate the extent of coastal waters: A Swedish case study , 2009, Hydrobiologia.

[40]  K. Carder,et al.  Marine humic and fulvic acids: Their effects on remote sensing of ocean chlorophyll , 1989 .

[41]  Jukka Seppälä,et al.  Ship-of-opportunity based phycocyanin fluorescence monitoring of the filamentous cyanobacteria bloom dynamics in the Baltic Sea , 2007 .

[42]  Susanne Kratzer,et al.  Satellite-based water quality monitoring for improved spatial and temporal retrieval of chlorophyll-a in coastal waters , 2015 .

[43]  Jean Dubranna,et al.  Assessing phytoplankton community composition from hyperspectral measurements of phytoplankton absorption coefficient and remote-sensing reflectance in open-ocean environments , 2015 .

[44]  Chuanmin Hu,et al.  Estimation of diffuse attenuation of ultraviolet light in optically shallow Florida Keys waters from MODIS measurements , 2014 .

[45]  Giuseppe Zibordi,et al.  Immersion factors for the RAMSES series of hyper-spectral underwater radiometers , 2006 .

[46]  Christopher T. Jones,et al.  Deriving optical metrics of coastal phytoplankton biomass from ocean colour , 2012 .

[47]  John T. O. Kirk Light and photosynthesis in aquatic ecosystems: Absorption of light within the aquatic medium , 1994 .

[48]  P. Kowalczuk,et al.  Optical characteristics of two contrasting Case 2 waters and their influence on remote sensing algorithms , 2003 .

[49]  E. Marañón,et al.  Maximum photosynthetic efficiency of size‐fractionated phytoplankton assessed by 14C uptake and fast repetition rate fluorometry , 2005 .

[50]  D. Stramski,et al.  An evaluation of MODIS and SeaWiFS bio-optical algorithms in the Baltic Sea , 2004 .

[51]  Mark A. Moline,et al.  Deriving in situ phytoplankton absorption for bio‐optical productivity models in turbid waters , 2004 .

[52]  J. Stoń-Egiert,et al.  Quantitative analysis of extracted phycobilin pigments in cyanobacteria—an assessment of spectrophotometric and spectrofluorometric methods , 2014, Journal of Applied Phycology.

[53]  L. Schlüter,et al.  The use of phytoplankton pigments for identifying and quantifying phytoplankton groups in coastal areas: testing the influence of light and nutrients on pigment/chlorophyll a ratios , 2000 .

[54]  Thomas Kiørboe,et al.  Turbulence, Phytoplankton Cell Size, and the Structure of Pelagic Food Webs , 1993 .

[55]  Annick Bricaud,et al.  Spatial‐temporal variations in phytoplankton size and colored detrital matter absorption at global and regional scales, as derived from twelve years of SeaWiFS data (1998–2009) , 2012 .

[56]  Adam Krezel,et al.  Empirical Model for Phycocyanin Concentration Estimation as an Indicator of Cyanobacterial Bloom in the Optically Complex Coastal Waters of the Baltic Sea , 2016, Remote. Sens..

[57]  Y. Yamanaka,et al.  Synoptic relationships between surface Chlorophyll- a and diagnostic pigments specific to phytoplankton functional types , 2011 .

[58]  M. Kahru,et al.  Ocean Color Chlorophyll Algorithms for SEAWIFS , 1998 .

[59]  Michele Scardi,et al.  A comparison of global estimates of marine primary production from ocean color , 2006 .

[60]  Janet W. Campbell,et al.  The lognormal distribution as a model for bio‐optical variability in the sea , 1995 .

[61]  Paul G. Falkowski,et al.  A consumer's guide to phytoplankton primary productivity models , 1997 .

[62]  M. Behrenfeld,et al.  Colored dissolved organic matter and its influence on the satellite‐based characterization of the ocean biosphere , 2005 .