Synthesis, anticancer activity, toxicity evaluation and molecular docking studies of novel phenylaminopyrimidine - (thio)urea hybrids as potential kinase inhibitors

Thirty-two novel urea/thiourea compounds as potential kinase inhibitor were designed, synthesized and evaluated for their cytotoxic activity on breast (MCF7), colon (HCT116) and liver (Huh7) cancer cell lines. Compounds 10, 19 and 30 possessing anticancer activity with IC50 values of 0.9, 0.8 and 1.6μM respectively on Huh7 cells were selected for further studies. These hit compounds were tested against liver carcinoma panel. Real time cell electronic sensing assay was used to evaluate the effects of the compounds 10, 19 and 30 on the growth pattern of liver cancer cells. Apoptotic cell death and cell cycle analysis upon treatment of liver carcinoma cells with hit compounds were determined. A significant apoptotic cell death was detected upon treatment of Huh7 and Mahlavu cells with compound 30 after 48 h of treatment. Additionally, compound 10 caused cell cycle arrest at G0/G1 phase. Mutagenicity of hit compounds was evaluated. Assertively, these compounds were not found to be mutagenic on Salmonella typhimurium strains TA98 and TA100. To understand the binding modes of the synthesized compounds, molecular docking studies were performed using the crystal data of VEGFR and Src-kinase enzymes in correlation with anticancer activities.

[1]  A. Levitzki,et al.  Tyrphostins and other tyrosine kinase inhibitors. , 2006, Annual review of biochemistry.

[2]  P. Yogeeswari,et al.  Design, Synthesis, and Molecular Docking Studies of a Conjugated Thiadiazole-Thiourea Scaffold as Antituberculosis Agents. , 2016, Biological & pharmaceutical bulletin.

[3]  J. Kuriyan,et al.  c-Src binds to the cancer drug imatinib with an inactive Abl/c-Kit conformation and a distributed thermodynamic penalty. , 2007, Structure.

[4]  Shanchun Guo,et al.  Vascular endothelial growth factor receptor-2 in breast cancer. , 2010, Biochimica et biophysica acta.

[5]  Quan Zhang,et al.  Syntheses and biological evaluation of 1,2,3-triazole and 1,3,4-oxadiazole derivatives of imatinib. , 2016, Bioorganic & medicinal chemistry letters.

[6]  A. Stepan,et al.  Synthesis and Biopharmaceutical Evaluation of Imatinib Analogues Featuring Unusual Structural Motifs , 2016, ChemMedChem.

[7]  Pascal Furet,et al.  Tyrosine kinase inhibitors: From rational design to clinical trials , 2001, Medicinal research reviews.

[8]  T. Yeatman,et al.  Role of Src expression and activation in human cancer , 2000, Oncogene.

[9]  Nikolaus Stiefl,et al.  Structural resemblances and comparisons of the relative pharmacological properties of imatinib and nilotinib. , 2010, Bioorganic & medicinal chemistry.

[10]  N. Peet Drug resistance: a growing problem. , 2010, Drug discovery today.

[11]  Synthesis of functionalized amides of 2-(arylamino)pyrimidine series , 2017, Russian Journal of Organic Chemistry.

[12]  Arie Lee,et al.  Cation–π interaction: a case for macrocycle–cation π-interaction by its ureidoarene counteranion , 2005 .

[13]  B. Ames,et al.  Revised methods for the Salmonella mutagenicity test. , 1983, Mutation research.

[14]  F. Begum,et al.  Synthesis, in vitro urease inhibitory activity, and molecular docking studies of thiourea and urea derivatives. , 2018, Bioorganic chemistry.

[15]  P. Mishra,et al.  Synthesis, anticonvulsant and CNS depressant activity of some new bioactive 1-(4-substituted-phenyl)-3-(4-oxo-2-phenyl/ethyl-4H-quinazolin-3-yl)-urea. , 2009, European journal of medicinal chemistry.

[16]  Anne Hersey,et al.  Rate-Limited Steps of Human Oral Absorption and QSAR Studies , 2002, Pharmaceutical Research.

[17]  A. Aly,et al.  Update survey on aroyl substituted thioureas and their applications , 2007 .

[18]  D. Hanahan,et al.  The Hallmarks of Cancer , 2000, Cell.

[19]  Michael Tong,et al.  Targeting conformational plasticity of protein kinases. , 2015, ACS chemical biology.

[20]  Tudor I. Oprea,et al.  A comprehensive map of molecular drug targets , 2016, Nature Reviews Drug Discovery.

[21]  Yu Luo,et al.  Design and Synthesis of New Imatinib Analogs Containing Thiazolyl Moiety , 2013 .

[22]  Aykut Özgür,et al.  Synthesis and anticancer activity of acyl thioureas bearing pyrazole moiety. , 2013, Bioorganic & medicinal chemistry.

[23]  T. Hunter,et al.  Oncogenic kinase signalling , 2001, Nature.

[24]  J. Mestan,et al.  AMN107 (nilotinib): a novel and selective inhibitor of BCR-ABL , 2006, British Journal of Cancer.

[25]  McCusker,et al.  W(CO)6-catalyzed oxidative carbonylation of primary amines to N,N'-disubstituted ureas in single or biphasic solvent systems. Optimization and functional group compatibility studies , 2000, The Journal of organic chemistry.

[26]  So Ha Lee,et al.  Design and synthesis of new anticancer pyrimidines with multiple-kinase inhibitory effect. , 2010, Bioorganic & medicinal chemistry.

[27]  T. Hunter,et al.  The Protein Kinase Complement of the Human Genome , 2002, Science.

[28]  Nasser S. M. Ismail,et al.  Design, synthesis and biological evaluation of type-II VEGFR-2 inhibitors based on quinoxaline scaffold. , 2014, Bioorganic chemistry.

[29]  P. Selzer,et al.  Fast calculation of molecular polar surface area as a sum of fragment-based contributions and its application to the prediction of drug transport properties. , 2000, Journal of medicinal chemistry.

[30]  E. De Clercq,et al.  Synthesis, antiviral and anticancer activity of some novel thioureas derived from N-(4-nitro-2-phenoxyphenyl)-methanesulfonamide. , 2009, European journal of medicinal chemistry.

[31]  Christopher Hulme,et al.  The design, synthesis, and evaluation of 8 hybrid DFG-out allosteric kinase inhibitors: a structural analysis of the binding interactions of Gleevec, Nexavar, and BIRB-796. , 2010, Bioorganic & medicinal chemistry.

[32]  J. Mestan,et al.  Urea derivatives of STI571 as inhibitors of Bcr-Abl and PDGFR kinases. , 2004, Bioorganic & medicinal chemistry letters.

[33]  F. K. Onurdağ,et al.  Synthesis of some new urea and thiourea derivatives and evaluation of their antimicrobial activities , 2012, Turkish Journal of Chemistry.

[34]  A. Abadi,et al.  First Bispecific Inhibitors of the Epidermal Growth Factor Receptor Kinase and the NF-κB Activity As Novel Anticancer Agents. , 2017, Journal of medicinal chemistry.