Two overlapping transcription units which extend across the L-S junction of herpes simplex virus type 1

A region of the herpes simplex virus type 1 genome located upstream of the alpha 0 promoter contains a promoter which regulates transcription in the opposite orientation to that driven by alpha 0. Analyses of mutants from which this promoter, alpha X, was deleted and a mutant in which a fragment that serves as a transcription terminator and polyadenylation signal was inserted upstream of this promoter demonstrate that two distinct transcription units overlap this region of the genome and are transcribed in a direction antisense to the neurovirulence gene gamma (1)34.5. One unit, dependent on the alpha X promoter, is active when cells are infected in the presence of the protein synthesis inhibitor cycloheximide. The second unit, independent of alpha X, is active during the course of productive infection. This transcription unit originates from a promoter upstream of alpha X which is distinct from the latency-associated promoter (LAP). Two polyadenylated transcripts of 0.9 and 4.9 kb accumulate from this region of the genome during productive infection, but no mature transcripts accumulate in infected cells maintained in the presence of cycloheximide. Kinetic analyses demonstrate that the transcripts that accumulate during productive infection fall into the beta class of herpes simplex virus type 1 genes.

[1]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[2]  B. Roizman,et al.  Expression of a herpes simplex virus 1 open reading frame antisense to the gamma(1)34.5 gene and transcribed by an RNA 3' coterminal with the unspliced latency-associated transcript , 1994, Journal of virology.

[3]  J. Glorioso,et al.  A novel latency-active promoter is contained within the herpes simplex virus type 1 UL flanking repeats , 1994, Journal of virology.

[4]  P. Schaffer,et al.  A novel class of transcripts expressed with late kinetics in the absence of ICP4 spans the junction between the long and short segments of the herpes simplex virus type 1 genome , 1993, Journal of virology.

[5]  S. Deshmane,et al.  Herpes simplex virus type 1 latency-associated transcript (LAT) promoter deletion mutants can express a 2-kilobase transcript mapping to the LAT region , 1993, Journal of virology.

[6]  E. Wagner,et al.  Transcriptional analysis of the herpes simplex virus type 1 region containing the TRL/UL junction. , 1993, Virology.

[7]  B. Roizman,et al.  Processing of the herpes simplex virus regulatory protein alpha 22 mediated by the UL13 protein kinase determines the accumulation of a subset of alpha and gamma mRNAs and proteins in infected cells. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[8]  B. Roizman,et al.  Replication, establishment of latency, and induced reactivation of herpes simplex virus gamma 1 34.5 deletion mutants in rodent models. , 1993, The Journal of clinical investigation.

[9]  A. Papavassiliou,et al.  Identification of a promoter mapping within the reiterated sequences that flank the herpes simplex virus type 1 UL region , 1993, Journal of virology.

[10]  B. Roizman,et al.  The gamma 1(34.5) gene of herpes simplex virus 1 precludes neuroblastoma cells from triggering total shutoff of protein synthesis characteristic of programed cell death in neuronal cells. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[11]  S. Goodart,et al.  Relationship between polyadenylated and nonpolyadenylated herpes simplex virus type 1 latency-associated transcripts , 1991, Journal of virology.

[12]  A. Papavassiliou,et al.  Analysis of the herpes simplex virus type 1 promoter controlling the expression of UL38, a true late gene involved in capsid assembly , 1991, Journal of virology.

[13]  B. Roizman,et al.  Mapping of herpes simplex virus-1 neurovirulence to gamma 134.5, a gene nonessential for growth in culture. , 1990, Science.

[14]  A. Nesburn,et al.  Activity of herpes simplex virus type 1 latency-associated transcript (LAT) promoter in neuron-derived cells: evidence for neuron specificity and for a large LAT transcript , 1990, Journal of virology.

[15]  B. Roizman,et al.  The herpes simplex virus 1 gene for ICP34.5, which maps in inverted repeats, is conserved in several limited-passage isolates but not in strain 17syn+ , 1990, Journal of virology.

[16]  W. Flanagan,et al.  Identification of the latency-associated transcript promoter by expression of rabbit beta-globin mRNA in mouse sensory nerve ganglia latently infected with a recombinant herpes simplex virus , 1989, Journal of virology.

[17]  L. Su,et al.  Herpes simplex virus alpha protein ICP27 can inhibit or augment viral gene transactivation. , 1989, Virology.

[18]  L. McMahan,et al.  Herpes simplex virus type 1 ICP27 deletion mutants exhibit altered patterns of transcription and are DNA deficient , 1989, Journal of virology.

[19]  R. Sekulovich,et al.  The herpes simplex virus type 1 alpha protein ICP27 can act as a trans-repressor or a trans-activator in combination with ICP4 and ICP0 , 1988, Journal of virology.

[20]  B. Roizman,et al.  Properties of two 5'-coterminal RNAs transcribed part way and across the S component origin of DNA synthesis of the herpes simplex virus 1 genome. , 1988, Proceedings of the National Academy of Sciences of the United States of America.

[21]  D. Knipe,et al.  Gene-specific transactivation by herpes simplex virus type 1 alpha protein ICP27 , 1988, Journal of virology.

[22]  L. J. Perry,et al.  The complete DNA sequence of the long unique region in the genome of herpes simplex virus type 1. , 1988, The Journal of general virology.

[23]  S. McKnight,et al.  Transcriptional and post-transcriptional controls establish the cascade of herpes simplex virus protein synthesis. , 1987, Journal of molecular biology.

[24]  E. Wagner,et al.  RNA complementary to a herpesvirus alpha gene mRNA is prominent in latently infected neurons. , 1987, Science.

[25]  I. Gelman,et al.  Co-ordinate regulation of herpes simplex virus gene expression is mediated by the functional interaction of two immediate early gene products. , 1986, Journal of molecular biology.

[26]  D. McGeoch,et al.  Complete DNA sequence of the short repeat region in the genome of herpes simplex virus type 1. , 1986, Nucleic acids research.

[27]  B. Roizman,et al.  The terminal a sequence of the herpes simplex virus genome contains the promoter of a gene located in the repeat sequences of the L component , 1986, Journal of virology.

[28]  G. Hayward,et al.  Three trans-acting regulatory proteins of herpes simplex virus modulate immediate-early gene expression in a pathway involving positive and negative feedback regulation , 1985, Journal of virology.

[29]  P. Schaffer,et al.  Herpes simplex virus type 1 ICP27 is an essential regulatory protein , 1985, Journal of virology.

[30]  D. Knipe,et al.  Stimulation of expression of a herpes simplex virus DNA-binding protein by two viral functions. , 1985, Molecular and cellular biology.

[31]  D. McGeoch,et al.  Sequence determination and genetic content of the short unique region in the genome of herpes simplex virus type 1. , 1985, Journal of molecular biology.

[32]  S. Bachenheimer,et al.  Accumulation of herpes simplex virus type 1 RNAs of different kinetic classes in the cytoplasm of infected cells , 1985, Journal of virology.

[33]  D. Melton,et al.  Efficient in vitro synthesis of biologically active RNA and RNA hybridization probes from plasmids containing a bacteriophage SP6 promoter. , 1984, Nucleic acids research.

[34]  D. McGeoch,et al.  Determination of the sequence alteration in the DNA of the herpes simplex virus type 1 temperature-sensitive mutant ts K. , 1984, The Journal of general virology.

[35]  B. Roizman,et al.  Colonization of murine ganglia by a superinfecting strain of herpes simplex virus , 1983, Infection and immunity.

[36]  A. Feinberg,et al.  A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. , 1983, Analytical biochemistry.

[37]  D. Hanahan Studies on transformation of Escherichia coli with plasmids. , 1983, Journal of molecular biology.

[38]  D. Holmes,et al.  A rapid boiling method for the preparation of bacterial plasmids. , 1981, Analytical biochemistry.

[39]  G. V. Vande Woude,et al.  Structures of two spliced herpes simplex virus type 1 immediate-early mRNA's which map at the junctions of the unique and reiterated regions of the virus DNA S component , 1981, Journal of virology.

[40]  R. Dixon,et al.  Fine-structure mapping and functional analysis of temperature-sensitive mutants in the gene encoding the herpes simplex virus type 1 immediate early protein VP175 , 1980, Journal of virology.

[41]  R. Watson,et al.  A herpes simplex virus type 1 function continuously required for early and late virus RNA synthesis , 1980, Nature.

[42]  W. Rutter,et al.  Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease. , 1979, Biochemistry.

[43]  C. Preston Control of herpes simplex virus type 1 mRNA synthesis in cells infected with wild-type virus or the temperature-sensitive mutant tsK , 1979, Journal of virology.

[44]  W. Summers,et al.  Structure of the joint region and the termini of the DNA of herpes simplex virus type 1 , 1978, Journal of virology.

[45]  H. Boedtker,et al.  RNA molecular weight determinations by gel electrophoresis under denaturing conditions, a critical reexamination. , 1977, Biochemistry.

[46]  S. Silverstein,et al.  Degradation of cellular mRNA during infection by herpes simplex virus. , 1977, Proceedings of the National Academy of Sciences of the United States of America.

[47]  R. Swanstrom,et al.  Quantitation of herpes simplex virus type 1 RNA in infected HeLa cells , 1977, Journal of virology.

[48]  H. Marsden,et al.  Control of protein synthesis in herpesvirus-infected cells: analysis of the polypeptides induced by wild type and sixteen temperature-sensitive mutants of HSV strain 17. , 1976, The Journal of general virology.

[49]  E. Southern Detection of specific sequences among DNA fragments separated by gel electrophoresis. , 1975, Journal of molecular biology.

[50]  D. Hogness,et al.  Colony hybridization: a method for the isolation of cloned DNAs that contain a specific gene. , 1975, Proceedings of the National Academy of Sciences of the United States of America.

[51]  R. Swanstrom,et al.  Restricted transcription of the herpes simplex virus genome occurring early after infection and in the presence of metabolic inhibitors. , 1975, Virology.

[52]  B. Roizman,et al.  Anatomy of herpes simplex virus DNA. II. Size, composition, and arrangement of inverted terminal repetitions , 1975, Journal of virology.

[53]  B. Roizman,et al.  Regulation of herpesvirus macromolecular synthesis: sequential transition of polypeptide synthesis requires functional viral polypeptides. , 1975, Proceedings of the National Academy of Sciences of the United States of America.

[54]  B. Roizman,et al.  Regulation of Herpesvirus Macromolecular Synthesis I. Cascade Regulation of the Synthesis of Three Groups of Viral Proteins , 1974, Journal of virology.

[55]  E. Kieff,et al.  Genetic Relatedness of Type 1 and Type 2 Herpes Simplex Viruses , 1972, Journal of virology.

[56]  E. Wagner Individual HSV Transcripts , 1985 .

[57]  E. Wagner Individual HSV Transcripts Characterization of Specific Genes , 1985 .

[58]  H. Birnboim,et al.  A RAPID ALKALINE EXTRACTION PROCEDURE FOR SCREENING RECOMBINANT DNA , 1979 .

[59]  P. Sheldrick,et al.  Inverted repetitions in the chromosome of herpes simplex virus. , 1975, Cold Spring Harbor symposia on quantitative biology.