Fungal functional ecology: bringing a trait‐based approach to plant‐associated fungi
暂无分享,去创建一个
Scott T. Bates | R. Gazis | D. Hibbett | T. Crowther | K. Treseder | M. Schildhauer | A. Zanne | Michelle E. Afkhami | W. Cornwell | Natalie Christian | D. Maynard | P. Kennedy | R. H. Nilsson | D. Lindner | K. Abarenkov | Jennifer M. Bhatnagar | D. Floudas | J. Powell | P. Busby | Habacuc Flores‐Moreno | J. Schilling | Amy M. Milo | C. Aguilar‐Trigueros
[1] R. Gazis,et al. Endophytes from wild rubber trees as antagonists of the pathogen Corynespora cassiicola. , 2019, Phytopathology.
[2] A. Zanne,et al. Finding fungal ecological strategies: Is recycling an option? , 2019, Fungal Ecology.
[3] N. Picard,et al. Climatic controls of decomposition drive the global biogeography of forest-tree symbioses , 2019, Nature.
[4] R. Kolka,et al. Melanin mitigates the accelerated decay of mycorrhizal necromass with peatland warming. , 2019, Ecology letters.
[5] Lynne Boddy,et al. Handbook for the measurement of macrofungal functional traits: A start with basidiomycete wood fungi , 2018, Functional Ecology.
[6] D. Hibbett,et al. Contemporaneous radiations of fungi and plants linked to symbiosis , 2018, Nature Communications.
[7] M. Rillig,et al. Biodiversity of arbuscular mycorrhizal fungi and ecosystem function. , 2018, The New phytologist.
[8] M. Zobel. Eltonian niche width determines range expansion success in ectomycorrhizal conifers. , 2018, The New phytologist.
[9] B. Henrissat,et al. High intraspecific genome diversity in the model arbuscular mycorrhizal symbiont Rhizophagus irregularis. , 2018, The New phytologist.
[10] Alejandro Ordonez,et al. Below-ground biotic interactions moderated the postglacial range dynamics of trees. , 2018, The New phytologist.
[11] W. Cornwell,et al. Bridging reproductive and microbial ecology: a case study in arbuscular mycorrhizal fungi , 2018, The ISME Journal.
[12] Silvio C. E. Tosatto,et al. The Pfam protein families database in 2019 , 2018, Nucleic Acids Res..
[13] L. Tedersoo,et al. Misdiagnosis of mycorrhizas and inappropriate recycling of data can lead to false conclusions. , 2018, The New phytologist.
[14] D. Hibbett,et al. Evolutionary dynamics of host specialization in wood-decay fungi , 2018, BMC Evolutionary Biology.
[15] Ebuka S. Arinze,et al. Impact of Yeast Pigmentation on Heat Capture and Latitudinal Distribution , 2018, Current Biology.
[16] D. Hibbett,et al. Phylogenetic taxon definitions for Fungi, Dikarya, Ascomycota and Basidiomycota , 2018, IMA fungus.
[17] Kessy Abarenkov,et al. High-level classification of the Fungi and a tool for evolutionary ecological analyses , 2018, Fungal Diversity.
[18] Hanhong Bae,et al. Endophytic Trichoderma citrinoviride isolated from mountain-cultivated ginseng (Panax ginseng) has great potential as a biocontrol agent against ginseng pathogens , 2018, Journal of ginseng research.
[19] Michelle E. Afkhami,et al. Cooperation and coexpression: How coexpression networks shift in response to multiple mutualists , 2018, Molecular ecology.
[20] J. Heilmann‐Clausen,et al. Fungal spore diversity reflects substrate-specific deposition challenges , 2018, Scientific Reports.
[21] K. Clemmensen,et al. From mycorrhizal fungal traits to ecosystem properties – and back again , 2018 .
[22] P. Kennedy,et al. Melanization of mycorrhizal fungal necromass structures microbial decomposer communities , 2018 .
[23] B. Sulman,et al. Interactions among decaying leaf litter, root litter and soil organic matter vary with mycorrhizal type , 2018 .
[24] K. Treseder,et al. Arbuscular mycorrhizal fungi as mediators of ecosystem responses to nitrogen deposition: A trait‐based predictive framework , 2018 .
[25] T. Cajthaml,et al. Decomposer food web in a deciduous forest shows high share of generalist microorganisms and importance of microbial biomass recycling , 2018, The ISME Journal.
[26] P. Baldrian. Microbial enzyme-catalyzed processes in soils and their analysis. A review , 2018 .
[27] M. Tomšovský,et al. Clearcutting alters decomposition processes and initiates complex restructuring of fungal communities in soil and tree roots , 2018, The ISME Journal.
[28] Andrew Nicholas Miller,et al. The Mycology Collections Portal (MyCoPortal) , 2017 .
[29] Josef C. Uyeda,et al. Rethinking phylogenetic comparative methods , 2017, bioRxiv.
[30] J. Powell,et al. Relationships between mycorrhizal type and leaf flammability in the Australian flora , 2017 .
[31] Jennifer M. Bhatnagar,et al. Distributions of fungal melanin across species and soils , 2017 .
[32] Brian J. McGill,et al. The bien r package: A tool to access the Botanical Information and Ecology Network (BIEN) database , 2017 .
[33] John J. Wiens,et al. Inordinate Fondness Multiplied and Redistributed: the Number of Species on Earth and the New Pie of Life , 2017, The Quarterly Review of Biology.
[34] J. Slot,et al. Six Key Traits of Fungi: Their Evolutionary Origins and Genetic Bases. , 2017, Microbiology spectrum.
[35] Robert Lücking,et al. Fungal Diversity Revisited: 2.2 to 3.8 Million Species , 2017, Microbiology spectrum.
[36] T. Crowther,et al. Applying allometric theory to fungi , 2017, The ISME Journal.
[37] J. Elser,et al. Carbon:Nitrogen:Phosphorus Stoichiometry in Fungi: A Meta-Analysis , 2017, Front. Microbiol..
[38] Anna Norberg,et al. Measuring and predicting the influence of traits on the assembly processes of wood‐inhabiting fungi , 2017 .
[39] Daniel S Maynard,et al. Diversity begets diversity in competition for space , 2017, Nature Ecology &Evolution.
[40] Natalie Christian,et al. Chapter 5 A Novel Framework for Decoding Fungal Endophyte Diversity , 2017 .
[41] P. B. Matheny,et al. How to know the fungi: combining field inventories and DNA-barcoding to document fungal diversity. , 2017, The New phytologist.
[42] J. Heilmann‐Clausen,et al. Mean spore size and shape in ectomycorrhizal and saprotrophic assemblages show strong responses under resource constraints , 2017 .
[43] M. Unterseher,et al. What do we learn from cultures in the omics age? High-throughput sequencing and cultivation of leaf-inhabiting endophytes from beech (Fagus sylvatica L.) revealed complementary community composition but similar correlations with local habitat conditions , 2017 .
[44] A. Mithöfer. Plant carnivory: Pitching to the same target , 2017, Nature Plants.
[45] P. Kennedy,et al. Fungal endophytes as priority colonizers initiating wood decomposition , 2017 .
[46] Mark A. Miller,et al. T‐BAS: Tree‐Based Alignment Selector toolkit for phylogenetic‐based placement, alignment downloads and metadata visualization: an example with the Pezizomycotina tree of life , 2016, Bioinform..
[47] D. Hibbett,et al. Sequence-based classification and identification of Fungi , 2016, Mycologia.
[48] Francis Martin,et al. Unearthing the roots of ectomycorrhizal symbioses , 2016, Nature Reviews Microbiology.
[49] A. Adholeya,et al. Phylogenetic analyses reveal molecular signatures associated with functional divergence among Subtilisin like Serine Proteases are linked to lifestyle transitions in Hypocreales , 2016, BMC Evolutionary Biology.
[50] G. May. Here come the commensals. , 2016, American journal of botany.
[51] P. Stevens,et al. Mutualism Persistence and Abandonment during the Evolution of the Mycorrhizal Symbiosis , 2016, The American Naturalist.
[52] Dehong Hu,et al. Localizing gene regulation reveals a staggered wood decay mechanism for the brown rot fungus Postia placenta , 2016, Proceedings of the National Academy of Sciences of the United States of America.
[53] Conrad L. Schoch,et al. Scaling up discovery of hidden diversity in fungi: impacts of barcoding approaches , 2016, Philosophical Transactions of the Royal Society B: Biological Sciences.
[54] J. Stajich,et al. A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data , 2016, Mycologia.
[55] Jianping Xu. Fungal DNA barcoding. , 2016, Genome.
[56] P. Kirk,et al. Climate impacts on fungal community and trait dynamics , 2016 .
[57] K. Peay,et al. Competition-function tradeoffs in ectomycorrhizal fungi , 2016, PeerJ.
[58] T. Crowther,et al. Patterns of natural fungal community assembly during initial decay of coniferous and broadleaf tree logs , 2016 .
[59] Natalie Christian,et al. Plant Host and Geographic Location Drive Endophyte Community Composition in the Face of Perturbation , 2016, Microbial Ecology.
[60] K. Peay,et al. Dimensions of biodiversity in the Earth mycobiome , 2016, Nature Reviews Microbiology.
[61] Michelle E. Afkhami,et al. Native fungal endophytes suppress an exotic dominant and increase plant diversity over small and large spatial scales. , 2016, Ecology.
[62] Scott T. Bates,et al. FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild , 2016 .
[63] D. Hibbett,et al. Comparative Genomics of Early-Diverging Mushroom-Forming Fungi Provides Insights into the Origins of Lignocellulose Decay Capabilities. , 2016, Molecular biology and evolution.
[64] J. Dighton. Fungi in Ecosystem Processes, Second Edition , 2016 .
[65] R. Henrik Nilsson,et al. Top 50 most wanted fungi , 2016 .
[66] J. Dighton. Fungi in Ecosystem Processes , 2016 .
[67] Benjamin L Turner,et al. Shifts in symbiotic associations in plants capable of forming multiple root symbioses across a long‐term soil chronosequence , 2016, Ecology and evolution.
[68] P. Kennedy,et al. Revisiting the 'Gadgil effect': do interguild fungal interactions control carbon cycling in forest soils? , 2016, The New phytologist.
[69] K. Peay,et al. Common foliar fungi of Populus trichocarpa modify Melampsora rust disease severity. , 2016, The New phytologist.
[70] Marcus L. Roper,et al. Mushrooms use convectively created airflows to disperse their spores , 2016, Proceedings of the National Academy of Sciences.
[71] Natalia N. Ivanova,et al. The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4) , 2016, Standards in Genomic Sciences.
[72] S. Lumyong,et al. Relationships between terrestrial and freshwater lignicolous fungi , 2016 .
[73] K. Hyde,et al. Lignicolous freshwater fungi along a north-south latitudinal gradient in the Asian/Australian region; can we predict the impact of global warming on biodiversity and function? , 2016 .
[74] F. Bärlocher. Aquatic hyphomycetes in a changing environment , 2016 .
[75] G. Newcombe,et al. Fungal endophytes: modifiers of plant disease , 2015, Plant Molecular Biology.
[76] M. Bidochka,et al. Fungi with multifunctional lifestyles: endophytic insect pathogenic fungi , 2015, Plant Molecular Biology.
[77] R. Tavares,et al. Soil DNA pyrosequencing and fruitbody surveys reveal contrasting diversity for various fungal ecological guilds in chestnut orchards. , 2015, Environmental microbiology reports.
[78] J. Schilling,et al. Comparing lignocellulose physiochemistry after decomposition by brown rot fungi with distinct evolutionary origins. , 2015, Environmental microbiology.
[79] Jay T. Lennon,et al. Microbiomes in light of traits: A phylogenetic perspective , 2015, Science.
[80] D. Hibbett,et al. Ectomycorrhizal fungi decompose soil organic matter using oxidative mechanisms adapted from saprotrophic ancestors , 2015, The New phytologist.
[81] M. V. D. van der Heijden,et al. Regulation of resource exchange in the arbuscular mycorrhizal symbiosis , 2015, Nature Plants.
[82] R. Brandl,et al. Spore wall traits of ectomycorrhizal and saprotrophic agarics may mirror their distinct lifestyles , 2015 .
[83] Natalie Christian,et al. Microbiomes: unifying animal and plant systems through the lens of community ecology theory , 2015, Front. Microbiol..
[84] C. Kuske,et al. Soil bacterial and fungal community responses to nitrogen addition across soil depth and microhabitat in an arid shrubland , 2015, Front. Microbiol..
[85] B. Henrissat,et al. Functional guild classification predicts the enzymatic role of fungi in litter and soil biogeochemistry , 2015 .
[86] G. Berg,et al. The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes , 2015, Microbiology and Molecular Reviews.
[87] Petr Baldrian,et al. Biotic interactions mediate soil microbial feedbacks to climate change , 2015, Proceedings of the National Academy of Sciences.
[88] K. Treseder,et al. Fungal Traits That Drive Ecosystem Dynamics on Land , 2015, Microbiology and Molecular Reviews.
[89] Michael J. Aspinwall,et al. BAAD: a Biomass And Allometry Database for woody plants , 2015 .
[90] Zewei Song,et al. Signature Wood Modifications Reveal Decomposer Community History , 2015, PloS one.
[91] R. B. Jackson,et al. Redefining fine roots improves understanding of below-ground contributions to terrestrial biosphere processes. , 2015, The New phytologist.
[92] E. Kiers,et al. Order of arrival structures arbuscular mycorrhizal colonization of plants. , 2015, The New phytologist.
[93] R. Miller,et al. Mycorrhizal phenotypes and the Law of the Minimum. , 2015, The New phytologist.
[94] A. Salamov,et al. Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists , 2015, Nature Genetics.
[95] P. Baldrian,et al. Enzymatic systems involved in decomposition reflects the ecology and taxonomy of saprotrophic fungi , 2015 .
[96] R. Gazis,et al. Unexpected diversity of basidiomycetous endophytes in sapwood and leaves of Hevea , 2015, Mycologia.
[97] In-Jung Lee,et al. Endophytic fungi promote plant growth and mitigate the adverse effects of stem rot: an example of Penicillium citrinum and Aspergillus terreus , 2015 .
[98] A. Casadevall,et al. Microbiology: Ditch the term pathogen , 2014, Nature.
[99] J. G. Burleigh,et al. Synthesis of phylogeny and taxonomy into a comprehensive tree of life , 2014, Proceedings of the National Academy of Sciences.
[100] J. Heilmann‐Clausen,et al. Communities of wood‐inhabiting bryophytes and fungi on dead beech logs in Europe – reflecting substrate quality or shaped by climate and forest conditions? , 2014 .
[101] R. Henrik Nilsson,et al. Global diversity and geography of soil fungi , 2014, Science.
[102] Juancarlos Chan,et al. Gene Ontology Consortium: going forward , 2014, Nucleic Acids Res..
[103] T. Crowther,et al. Untangling the fungal niche: the trait-based approach , 2014, Front. Microbiol..
[104] Michelle E. Afkhami,et al. Mutualist-mediated effects on species' range limits across large geographic scales. , 2014, Ecology letters.
[105] Ignazio Carbone,et al. Tissue storage and primer selection influence pyrosequencing‐based inferences of diversity and community composition of endolichenic and endophytic fungi , 2014, Molecular ecology resources.
[106] M. Rillig,et al. Ecological understanding of root-infecting fungi using trait-based approaches. , 2014, Trends in plant science.
[107] Jianchu Xu,et al. One stop shop: backbones trees for important phytopathogenic genera: I (2014) , 2014, Fungal Diversity.
[108] J. R. King,et al. Climate fails to predict wood decomposition at regional scales , 2014 .
[109] R. Henrik Nilsson,et al. Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi , 2014, Database J. Biol. Databases Curation.
[110] A. Salamov,et al. Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi , 2014, Proceedings of the National Academy of Sciences.
[111] D. Bates,et al. Fitting Linear Mixed-Effects Models Using lme4 , 2014, 1406.5823.
[112] M. Heil,et al. Order of arrival shifts endophyte-pathogen interactions in bean from resistance induction to disease facilitation. , 2014, FEMS microbiology letters.
[113] Hsiao-Che Kuo,et al. Secret lifestyles of Neurospora crassa , 2014, Scientific Reports.
[114] R. Henrik Nilsson,et al. Improving ITS sequence data for identification of plant pathogenic fungi , 2014, Fungal Diversity.
[115] P. Reich. The world‐wide ‘fast–slow’ plant economics spectrum: a traits manifesto , 2014 .
[116] Matthew W. Pennell,et al. Functional distinctiveness of major plant lineages , 2014 .
[117] Jack W. McFarland,et al. A first comprehensive census of fungi in soil reveals both hyperdiversity and fine-scale niche partitioning , 2014 .
[118] R. Koide,et al. The function of melanin in the ectomycorrhizal fungus Cenococcum geophilum under water stress , 2013 .
[119] Inna Dubchak,et al. MycoCosm portal: gearing up for 1000 fungal genomes , 2013, Nucleic Acids Res..
[120] J. Klironomos,et al. A trait-based framework to understand life history of mycorrhizal fungi. , 2013, Trends in plant science.
[121] Richard P Phillips,et al. The mycorrhizal-associated nutrient economy: a new framework for predicting carbon-nutrient couplings in temperate forests. , 2013, The New phytologist.
[122] T. Kuyper,et al. A thready affair: linking fungal diversity and community dynamics to terrestrial decomposition processes. , 2013, FEMS microbiology reviews.
[123] P. Reich,et al. New handbook for standardised measurement of plant functional traits worldwide , 2013 .
[124] Otso Ovaskainen,et al. Specialist species of wood‐inhabiting fungi struggle while generalists thrive in fragmented boreal forests , 2013 .
[125] Conrad L. Schoch,et al. Filling Gaps in Biodiversity Knowledge for Macrofungi: Contributions and Assessment of an Herbarium Collection DNA Barcode Sequencing Project , 2013, PloS one.
[126] Jin-Rong Xu,et al. Comparative analysis of fungal genomes reveals different plant cell wall degrading capacity in fungi , 2013, BMC Genomics.
[127] O. Ovaskainen,et al. Roots and Associated Fungi Drive Long-Term Carbon Sequestration in Boreal Forest , 2013, Science.
[128] Kessy Abarenkov,et al. Fungal community analysis by high-throughput sequencing of amplified markers – a user's guide , 2013, The New phytologist.
[129] Michelle E. Afkhami,et al. Fungal Symbionts as Manipulators of Plant Reproductive Biology , 2013, The American Naturalist.
[130] I. Schmitt,et al. Comparison of ITS1 and ITS2 rDNA in 454 sequencing of hyperdiverse fungal communities , 2013 .
[131] Shinichi Nakagawa,et al. A general and simple method for obtaining R2 from generalized linear mixed‐effects models , 2013 .
[132] A. Salamov,et al. Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi , 2012, PLoS pathogens.
[133] P. Baldrian,et al. Fungal community on decomposing leaf litter undergoes rapid successional changes , 2012, The ISME Journal.
[134] Matthew G. Bakker,et al. Harnessing the rhizosphere microbiome through plant breeding and agricultural management , 2012, Plant and Soil.
[135] M. Wallenstein,et al. A trait-based framework for predicting when and where microbial adaptation to climate change will affect ecosystem functioning , 2012, Biogeochemistry.
[136] Albee Y. Ling,et al. The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes , 2012, Science.
[137] A. Salamov,et al. Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen. , 2012, The New phytologist.
[138] N. Gerardo,et al. Horizontally transferred fungal carotenoid genes in the two-spotted spider mite Tetranychus urticae , 2012, Biology Letters.
[139] J. Brownstein,et al. Emerging fungal threats to animal, plant and ecosystem health , 2012, Nature.
[140] Antonio Di Pietro,et al. The Top 10 fungal pathogens in molecular plant pathology. , 2012, Molecular plant pathology.
[141] Guy Leonard,et al. Marine fungi: their ecology and molecular diversity. , 2012, Annual review of marine science.
[142] John Wieczorek,et al. Darwin Core: An Evolving Community-Developed Biodiversity Data Standard , 2012, PloS one.
[143] S. Stark,et al. Microbially Mediated Plant Functional Traits , 2011 .
[144] Fiona J. Thomson,et al. Seed dispersal distance is more strongly correlated with plant height than with seed mass , 2011 .
[145] B. Kendrick. Fungi: Ecological Importance and Impact on Humans , 2011 .
[146] L. Boddy,et al. Saprotrophic basidiomycete mycelia and their interspecific interactions affect the spatial distribution of extracellular enzymes in soil. , 2011, FEMS microbiology ecology.
[147] K. Treseder,et al. Evolutionary trade-offs among decomposers determine responses to nitrogen enrichment. , 2011, Ecology letters.
[148] D. Hibbett,et al. Fueling the future with fungal genomics , 2011 .
[149] S. Higgins,et al. TRY – a global database of plant traits , 2011, Global Change Biology.
[150] S. West,et al. Reciprocal Rewards Stabilize Cooperation in the Mycorrhizal Symbiosis , 2011, Science.
[151] A. Salamov,et al. The Plant Cell Wall–Decomposing Machinery Underlies the Functional Diversity of Forest Fungi , 2011, Science.
[152] C. Mora,et al. How Many Species Are There on Earth and in the Ocean? , 2011, PLoS biology.
[153] Kerstin Voigt,et al. Where is the unseen fungal diversity hidden? A study of Mortierella reveals a large contribution of reference collections to the identification of fungal environmental sequences. , 2011, The New phytologist.
[154] Bernard Henrissat,et al. Genomic Analysis of the Necrotrophic Fungal Pathogens Sclerotinia sclerotiorum and Botrytis cinerea , 2011, PLoS genetics.
[155] J. Kopecký,et al. Active and total microbial communities in forest soil are largely different and highly stratified during decomposition , 2011, The ISME Journal.
[156] Kristin H. Kane. Effects of endophyte infection on drought stress tolerance of Lolium perenne accessions from the Mediterranean region , 2011 .
[157] M. Raizada,et al. Conservation and Diversity of Seed Associated Endophytes in Zea across Boundaries of Evolution, Ethnography and Ecology , 2011, PloS one.
[158] K. Peay,et al. Rethinking ectomycorrhizal succession: are root density and hyphal exploration types drivers of spatial and temporal zonation? , 2011 .
[159] P. Bakker,et al. Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria , 2011, Science.
[160] K. Newsham. A meta-analysis of plant responses to dark septate root endophytes. , 2011, The New phytologist.
[161] N. Stenseth,et al. Mushroom's spore size and time of fruiting are strongly related: is moisture important? , 2011, Biology Letters.
[162] M. Blackwell. The fungi: 1, 2, 3 ... 5.1 million species? , 2011, American journal of botany.
[163] Guo-Ping Zhao,et al. Genome Sequencing and Comparative Transcriptomics of the Model Entomopathogenic Fungi Metarhizium anisopliae and M. acridum , 2011, PLoS genetics.
[164] Pari Skamnioti,et al. Genome Expansion and Gene Loss in Powdery Mildew Fungi Reveal Tradeoffs in Extreme Parasitism , 2010, Science.
[165] L. Tedersoo,et al. 454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases. , 2010, The New phytologist.
[166] M. Hijri,et al. Screening, identification and evaluation of potential biocontrol fungal endophytes against Rhizoctonia solani AG3 on potato plants. , 2010, FEMS microbiology letters.
[167] T. Fukami,et al. Assembly history dictates ecosystem functioning: evidence from wood decomposer communities. , 2010, Ecology letters.
[168] M. Wingfield,et al. Comparison of procedures to evaluate the pathogenicity of Ceratocystisfimbriata sensu lato isolates from Eucalyptus in South Africa , 2010 .
[169] A. Endo. A historical perspective on the discovery of statins , 2010, Proceedings of the Japan Academy. Series B, Physical and biological sciences.
[170] N. Moran,et al. Lateral Transfer of Genes from Fungi Underlies Carotenoid Production in Aphids , 2010, Science.
[171] Andy F. S. Taylor,et al. The UNITE database for molecular identification of fungi--recent updates and future perspectives. , 2010, The New phytologist.
[172] M. Rillig,et al. Phylogenetic trait conservatism and the evolution of functional trade-offs in arbuscular mycorrhizal fungi , 2009, Proceedings of the Royal Society B: Biological Sciences.
[173] Jason E. Stajich,et al. The Fungi , 2009, Current Biology.
[174] K. Peay,et al. Root tip competition among ectomycorrhizal fungi: are priority effects a rule or an exception? , 2009, Ecology.
[175] Jolanta Miadlikowska,et al. A phylogenetic estimation of trophic transition networks for ascomycetous fungi: are lichens cradles of symbiotrophic fungal diversification? , 2009, Systematic biology.
[176] T. Bechtold,et al. Handbook of Natural Colorants , 2009 .
[177] A. Arnold,et al. Fungal endophytes: diversity and functional roles. , 2009, The New phytologist.
[178] David Hewitt,et al. The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits. , 2009, Systematic biology.
[179] Jane E. Smith. Mycorrhizal Symbiosis (Third Edition) , 2009 .
[180] A. Salamov,et al. Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion , 2009, Proceedings of the National Academy of Sciences.
[181] S. Allison,et al. Decomposers in disguise: mycorrhizal fungi as regulators of soil C dynamics in ecosystems under global change , 2008 .
[182] Thomas D. Bruns,et al. Fungal Community Ecology: A Hybrid Beast with a Molecular Master , 2008 .
[183] A. Varma,et al. The root-colonizing endophyte Pirifomospora indica confers drought tolerance in Arabidopsis by stimulating the expression of drought stress-related genes in leaves. , 2008, Molecular plant-microbe interactions : MPMI.
[184] J. Avalos,et al. The White Collar protein WcoA of Fusarium fujikuroi is not essential for photocarotenogenesis, but is involved in the regulation of secondary metabolism and conidiation. , 2008, Fungal genetics and biology : FG & B.
[185] J. Piotrowski,et al. Dynamics of mycorrhizae during development of riparian forests along an unregulated river , 2008 .
[186] J. Klironomos,et al. Influence of Phylogeny on Fungal Community Assembly and Ecosystem Functioning , 2007, Science.
[187] T. Osono. Ecology of ligninolytic fungi associated with leaf litter decomposition , 2007, Ecological Research.
[188] P. Crous,et al. Pathogenicity testing of lesser-known vascular fungi of grapevines , 2007, Australasian Plant Pathology.
[189] Laura E. Green,et al. The role of ecological theory in microbial ecology , 2007, Nature Reviews Microbiology.
[190] T. Taylor,et al. Fungal endophytes in a 400-million-yr-old land plant: infection pathways, spatial distribution, and host responses. , 2007, The New phytologist.
[191] S. Lumyong,et al. A Phylogenetic Evaluation of Whether Endophytes Become Saprotrophs at Host Senescence , 2007, Microbial Ecology.
[192] J. Spatafora,et al. Phylogenetic evidence for an animal pathogen origin of ergot and the grass endophytes , 2007, Molecular ecology.
[193] Rytas Vilgalys,et al. Diversity and phylogenetic affinities of foliar fungal endophytes in loblolly pine inferred by culturing and environmental PCR , 2007, Mycologia.
[194] David K. Johnson,et al. Biomass Recalcitrance: Engineering Plants and Enzymes for Biofuels Production , 2007, Science.
[195] S. Trumbore,et al. Spatial separation of litter decomposition and mycorrhizal nitrogen uptake in a boreal forest. , 2007, The New phytologist.
[196] R. Redman,et al. A Virus in a Fungus in a Plant: Three-Way Symbiosis Required for Thermal Tolerance , 2007, Science.
[197] R. Henrik Nilsson,et al. Taxonomic Reliability of DNA Sequences in Public Sequence Databases: A Fungal Perspective , 2006, PloS one.
[198] K. Thorpe. Diseases of Trees and Shrubs , 2006 .
[199] R. Kjøller. Disproportionate abundance between ectomycorrhizal root tips and their associated mycelia. , 2006, FEMS microbiology ecology.
[200] C. Machado,et al. Effects of ergot alkaloids on food preference and satiety in rabbits, as assessed with gene-knockout endophytes in perennial ryegrass (Lolium perenne). , 2006, Journal of agricultural and food chemistry.
[201] M. Westoby,et al. Seed size and plant strategy across the whole life cycle , 2006 .
[202] Jennifer A. Rudgers,et al. Plant-fungus mutualism affects spider composition in successional fields. , 2006, Ecology letters.
[203] S. Chisholm,et al. Host-Microbe Interactions: Shaping the Evolution of the Plant Immune Response , 2006, Cell.
[204] Roderick S. Bain,et al. Explaining Dioscorides' “Double Difference”: Why Are Some Mushrooms Poisonous, and Do They Signal Their Unprofitability? , 2005, The American Naturalist.
[205] Lynne Boddy,et al. Living in a fungal world: impact of fungi on soil bacterial niche development. , 2005, FEMS microbiology reviews.
[206] Rytas Vilgalys,et al. Fungal Community Analysis by Large-Scale Sequencing of Environmental Samples , 2005, Applied and Environmental Microbiology.
[207] P. R. Scott,et al. Plant disease: a threat to global food security. , 2005, Annual review of phytopathology.
[208] Jennifer A. Rudgers,et al. Connecting plant–microbial interactions above and belowground: a fungal endophyte affects decomposition , 2005, Oecologia.
[209] M. Rillig. Arbuscular mycorrhizae, glomalin, and soil aggregation , 2004 .
[210] L. Poorter,et al. Leaf traits and herbivory rates of tropical tree species differing in successional status. , 2004, Plant biology.
[211] J. Whipps. Prospects and limitations for mycorrhizas in biocontrol of root pathogens , 2004 .
[212] Richard P. Shefferson,et al. Evolutionary studies of ectomycorrhizal fungi: recent advances and future directions , 2004 .
[213] P. Reich,et al. Global patterns of plant leaf N and P in relation to temperature and latitude. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[214] C. Lovelock,et al. Using glomalin as an indicator for arbuscular mycorrhizal hyphal growth: an example from a tropical rain forest soil , 2004 .
[215] Sean Martin,et al. Globally distributed object identification for biological knowledgebases , 2004, Briefings Bioinform..
[216] A. Rincón,et al. Biocontrol mechanisms of Trichoderma strains. , 2004, International microbiology : the official journal of the Spanish Society for Microbiology.
[217] B. Thomma. Alternaria spp.: from general saprophyte to specific parasite. , 2003, Molecular plant pathology.
[218] P. Reich,et al. The Evolution of Plant Functional Variation: Traits, Spectra, and Strategies , 2003, International Journal of Plant Sciences.
[219] J. Nosanchuk,et al. Melanin and fungi , 2003, Current opinion in infectious diseases.
[220] Catherine G. Parks,et al. Coarse-scale population structure of pathogenic Armillaria species in a mixed-conifer forest in the Blue Mountains of northeast Oregon , 2003 .
[221] J. Henson,et al. Thermotolerance Generated by Plant/Fungal Symbiosis , 2002, Science.
[222] K. Mendgen,et al. Plant infection and the establishment of fungal biotrophy. , 2002, Trends in plant science.
[223] R. Sinsabaugh,et al. Allocation of extracellular enzymatic activity in relation to litter composition, N deposition, and mass loss , 2002 .
[224] R. Stevenson,et al. AGTR2 Mutations in X-Linked Mental Retardation , 2002, Science.
[225] M. Allen,et al. Endo- and ectomycorrhizas in Quercusagrifolia Nee. (Fagaceae): patterns of root colonization and effects on seedling growth , 2001, Mycorrhiza.
[226] M. Berbee,et al. The phylogeny of plant and animal pathogens in the Ascomycota , 2001 .
[227] A. Hodge,et al. An arbuscular mycorrhizal fungus accelerates decomposition and acquires nitrogen directly from organic material , 2001, Nature.
[228] P. Reich,et al. Strategy shifts in leaf physiology, structure and nutrient content between species of high‐ and low‐rainfall and high‐ and low‐nutrient habitats , 2001 .
[229] R. Augé. Water relations, drought and vesicular-arbuscular mycorrhizal symbiosis , 2001, Mycorrhiza.
[230] L. Guzmán-Dávalos,et al. Some aphyllophorales tested for organic dyes , 2001 .
[231] A. Bessette,et al. The Rainbow Beneath My Feet: A Mushroom Dyer's Field Guide , 2001 .
[232] D. Malinowski,et al. Leaf endophyte Neotyphodium coenophialum modifies mineral uptake in tall fescue , 2000, Plant and Soil.
[233] D. McLaughlin,et al. Systematics and Evolution , 2000, The Mycota.
[234] R. Sinsabaugh,et al. MICROBIAL ENZYME SHIFTS EXPLAIN LITTER DECAY RESPONSES TO SIMULATED NITROGEN DEPOSITION , 2000 .
[235] J. Usall,et al. Biological control of blue mould on apple by a strain of Candida sake under several controlled atmosphere conditions. , 2000, International journal of food microbiology.
[236] D. Godbold,et al. Metal toxicity and ectomycorrhizas , 2000 .
[237] James F. White,et al. An Overview of Endophytic Microbes: Endophytism Defined , 2000 .
[238] P. Reich,et al. Generality of leaf trait relationships: a test across six biomes: Ecology , 1999 .
[239] Ian R. Sanders,et al. Mycorrhizal fungal diversity determines plant biodiversity, ecosystem variability and productivity , 1998, Nature.
[240] K. Saikkonen,et al. FUNGAL ENDOPHYTES: A Continuum of Interactions with Host Plants , 1998 .
[241] A. Varma,et al. PIRIFORMOSPORA INDICA, GEN. ET SP. NOV., A NEW ROOT-COLONIZING FUNGUS , 1998 .
[242] P. Reich,et al. From tropics to tundra: global convergence in plant functioning. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[243] J. Bever,et al. Genetic variation of morphological characters within a single isolate of the endomycorrhizal fungus Glomus clarum (Glomaceae). , 1997, American journal of botany.
[244] R. Zabel,et al. Comparison of wood decay among diverse lignicolous fungi , 1997 .
[245] E. Jacobson,et al. Antioxidant function of melanin in black fungi , 1995, Infection and immunity.
[246] Dennis C. Wilson. Endophyte: The Evolution of a Term, and Clarification of Its Use and Definition , 1995 .
[247] P. Klinkhamer. Plant allometry: The scaling of form and process , 1995 .
[248] A. Jarosz,et al. Effects of disease in wild plant populations and the evolution of pathogen aggressiveness , 1995 .
[249] A. Wennström. Endophyte: The Misuse of an Old Term , 1994 .
[250] G. Gadd. Interactions of fungip with toxic metals , 1993 .
[251] D. Hibbett,et al. Evolutionary relationships within the fungi: analyses of nuclear small subunit rRNA sequences. , 1992, Molecular phylogenetics and evolution.
[252] K. Clay. Fungal Endophytes of Grasses: A Defensive Mutualism between Plants and Fungi , 1988 .
[253] C. Brownlee,et al. The structure and function of mycelial systems of ectomycorrhizal roots with special reference to their role in forming inter-plant connections and providing pathways for assimilate and water transport , 1983, Plant and Soil.
[254] John F. Muratore,et al. Nitrogen and Lignin Control of Hardwood Leaf Litter Decomposition Dynamics , 1982 .
[255] W. Gams. Introduction to the history of mycology , 1977, Netherlands journal of plant pathology.
[256] J. P. Grime. Vegetation classification by reference to strategies , 1974, Nature.
[257] P. Gadgil,et al. Mycorrhiza and Litter Decomposition , 1971, Nature.
[258] R. Macarthur,et al. The Theory of Island Biogeography , 1969 .
[259] Ph. Gitta L. Coaker,et al. Plant Pathology , 1957, Nature.
[260] G. W. Martin. Systematic Position of the Slime Molds and Its Bearing on the Classification of the Fungi , 1932, Botanical Gazette.
[261] V. Blackman. THE SIGNIFICANCE OF THE EFFICIENCY INDEX OF PLANT GROWTH. , 1920 .
[262] 21. B. Frank: Ueber die auf Wurzelsymbiose beruhende Ernährung gewisser Bäume durch unterirdische Pilze , 1885, Berichte der Deutschen Botanischen Gesellschaft.
[263] Lauren C. Cline,et al. Ecological and functional effects of fungal endophytes on wood decomposition , 2018 .
[264] Bernard Henrissat,et al. The genome of Xylona heveae provides a window into fungal endophytism. , 2016, Fungal biology.
[265] A. Bennett,et al. Unpredictable assembly of arbuscular mycorrhizal fungal communities , 2016 .
[266] D. McLaughlin. Systematics and Evolution : Part B , 2015 .
[267] R. Koide,et al. Determining place and process: functional traits of ectomycorrhizal fungi that affect both community structure and ecosystem function. , 2014, The New phytologist.
[268] R Core Team,et al. R: A language and environment for statistical computing. , 2014 .
[269] T. Mengiste. Plant immunity to necrotrophs. , 2012, Annual review of phytopathology.
[270] M. Sadowsky,et al. Competition between two wood-degrading fungi with distinct influences on residues. , 2012, FEMS microbiology ecology.
[271] P. Gadgil,et al. SUPPRESSION OF LITTER DECOMPOSITION BY MYCORRHIZAL ROOTS OF PINUS RADIATA , 2012 .
[272] J. Maron,et al. Soil fungal pathogens and the relationship between plant diversity and productivity. , 2011, Ecology letters.
[273] F. Martin,et al. Blurred boundaries: lifestyle lessons from ectomycorrhizal fungal genomes. , 2011, Trends in genetics : TIG.
[274] P. Baldrian,et al. Production of extracellular enzymes and degradation of biopolymers by saprotrophic microfungi from the upper layers of forest soil , 2010, Plant and Soil.
[275] Schmaile. Mycotoxins in Crops: A Threat to Human and Domestic Animal Health , 2009 .
[276] B. Lindahl,et al. Chapter 10 Distribution and function of litter basidiomycetes in coniferous forests , 2008 .
[277] Jonathan P. Lynch,et al. ROOT STRATEGIES FOR PHOSPHORUS ACQUISITION , 2008 .
[278] Jennifer A. Rudgers,et al. Forest succession suppressed by an introduced plant-fungal symbiosis. , 2007, Ecology.
[279] U. Nehls,et al. Sugar for my honey: carbohydrate partitioning in ectomycorrhizal symbiosis. , 2007, Phytochemistry.
[280] Christian P. Kubicek,et al. Fungal decomposers of plant litter in aquatic ecosystems (chapter 17) , 2007 .
[281] G. Gadd. Fungi in biogeochemical cycles , 2006 .
[282] Gary E. Harman,et al. Trichoderma species — opportunistic, avirulent plant symbionts , 2004, Nature Reviews Microbiology.
[283] Jennifer A. Rudgers,et al. Endophytic fungi alter relationships between diversity and ecosystem properties , 2004 .
[284] M. Westoby,et al. ECOLOGICAL STRATEGIES : Some Leading Dimensions of Variation Between Species , 2002 .
[285] A. Johansen,et al. Phosphatase activity of external hyphae of two arbuscular mycorrhizal fungi. , 2000 .
[286] A. Varma,et al. Mycorrhiza , 1995, Springer Berlin Heidelberg.
[287] O. Petrini. Fungal Endophytes of Tree Leaves , 1991 .
[288] Thomas D. Bruns,et al. Fungal Molecular Systematics , 1991 .
[289] Lynne Boddy,et al. Fungal decomposition of wood , 1988 .
[290] H. Mooney,et al. Resource Limitation in Plants-An Economic Analogy , 1985 .
[291] R. Gilbertson. Wood-Rotting Fungi of North America , 1980 .
[292] L. Valadon. Carotenoids as additional taxonomic characters in fungi: A review , 1976 .
[293] Agostino Bassi,et al. Del mal del segno , 1958 .
[294] Theophrastus.,et al. Enquiry into plants , 1916 .
[295] D. Hibbett,et al. Non-commercial Research and Educational Use including without Limitation Use in Instruction at Your Institution, Sending It to Specific Colleagues That You Know, and Providing a Copy to Your Institution's Administrator. All Other Uses, Reproduction and Distribution, including without Limitation Comm , 2022 .