The room temperature crystal structure of a bacterial phytochrome determined by serial femtosecond crystallography

[1]  R. Vierstra,et al.  Crystal Structure of Deinococcus Phytochrome in the Photoactivated State Reveals a Cascade of Structural Rearrangements during Photoconversion. , 2016, Structure.

[2]  Sébastien Boutet,et al.  Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation , 2015, Science.

[3]  J. Meldolesi,et al.  The Transcription Repressor REST in Adult Neurons: Physiology, Pathology, and Diseases1,2,3 , 2015, eNeuro.

[4]  Yoshiki Tanaka,et al.  Diverse application platform for hard X-ray diffraction in SACLA (DAPHNIS): application to serial protein crystallography using an X-ray free-electron laser , 2015, Journal of synchrotron radiation.

[5]  G. Schatz,et al.  X-ray radiation induces deprotonation of the bilin chromophore in crystalline D. radiodurans phytochrome. , 2015, Journal of the American Chemical Society.

[6]  Garth J. Williams,et al.  Time-resolved serial crystallography captures high-resolution intermediates of photoactive yellow protein , 2014, Science.

[7]  Changyong Song,et al.  Grease matrix as a versatile carrier of proteins for serial crystallography , 2014, Nature Methods.

[8]  J. Ihalainen,et al.  Origins of Fluorescence in Evolved Bacteriophytochromes* , 2014, The Journal of Biological Chemistry.

[9]  D. Bryant,et al.  Extensive remodeling of a cyanobacterial photosynthetic apparatus in far-red light , 2014, Science.

[10]  Huilin Li,et al.  Crystallographic and Electron Microscopic Analyses of a Bacterial Phytochrome Reveal Local and Global Rearrangements during Photoconversion* , 2014, The Journal of Biological Chemistry.

[11]  K. Moffat,et al.  FTIR Spectroscopy Revealing Light-Dependent Refolding of the Conserved Tongue Region of Bacteriophytochrome , 2014, The journal of physical chemistry letters.

[12]  R. Vierstra,et al.  Crystal structure of the photosensing module from a red/far-red light-absorbing plant phytochrome , 2014, Proceedings of the National Academy of Sciences.

[13]  Anton Barty,et al.  Cheetah: software for high-throughput reduction and analysis of serial femtosecond X-ray diffraction data , 2014, Journal of applied crystallography.

[14]  Kunio Hirata,et al.  Determination of damage-free crystal structure of an X-ray–sensitive protein using an XFEL , 2014, Nature Methods.

[15]  Andreas Menzel,et al.  Signal amplification and transduction in phytochrome photosensors , 2014, Nature.

[16]  D. Larsen,et al.  Dynamic Inhomogeneity in the Photodynamics of Cyanobacterial Phytochrome Cph1 , 2014, Biochemistry.

[17]  T. Hatsui,et al.  Development of an X-ray pixel detector with multi-port charge-coupled device for X-ray free-electron laser experiments. , 2014, The Review of scientific instruments.

[18]  Anton Barty,et al.  Lipidic cubic phase injector facilitates membrane protein serial femtosecond crystallography , 2014, Nature Communications.

[19]  I. Rissanen,et al.  Fluorescence properties of the chromophore-binding domain of bacteriophytochrome from Deinococcus radiodurans. , 2013, The journal of physical chemistry. B.

[20]  Hirotada Ohashi,et al.  Beamline, experimental stations and photon beam diagnostics for the hard x-ray free electron laser of SACLA , 2013 .

[21]  Jon Hughes,et al.  Phytochrome cytoplasmic signaling. , 2013, Annual review of plant biology.

[22]  P. Andrew Karplus,et al.  Linking Crystallographic Model and Data Quality , 2012, Science.

[23]  Anton Barty,et al.  CrystFEL: a software suite for snapshot serial crystallography , 2012 .

[24]  K. Satyshur,et al.  Structure-guided Engineering Enhances a Phytochrome-based Infrared Fluorescent Protein* , 2011, The Journal of Biological Chemistry.

[25]  Nathaniel Echols,et al.  Accessing protein conformational ensembles using room-temperature X-ray crystallography , 2011, Proceedings of the National Academy of Sciences.

[26]  K. Moffat,et al.  Primary reactions of bacteriophytochrome observed with ultrafast mid-infrared spectroscopy. , 2011, The journal of physical chemistry. A.

[27]  N. Pannu,et al.  REFMAC5 for the refinement of macromolecular crystal structures , 2011, Acta crystallographica. Section D, Biological crystallography.

[28]  Anton Barty,et al.  Structure-factor analysis of femtosecond microdiffraction patterns from protein nanocrystals. , 2011, Acta crystallographica. Section A, Foundations of crystallography.

[29]  J. Hughes,et al.  Two ground state isoforms and a chromophore D-ring photoflip triggering extensive intramolecular changes in a canonical phytochrome , 2011, Proceedings of the National Academy of Sciences.

[30]  Georg Weidenspointner,et al.  Femtosecond X-ray protein nanocrystallography , 2011, Nature.

[31]  M. Auldridge,et al.  Bacterial phytochromes: More than meets the light , 2011, Critical reviews in biochemistry and molecular biology.

[32]  Sébastien Boutet,et al.  The Coherent X-ray Imaging (CXI) instrument at the Linac Coherent Light Source (LCLS) , 2010 .

[33]  Richard A. Mathies,et al.  Ultrafast excited-state isomerization in phytochrome revealed by femtosecond stimulated Raman spectroscopy , 2009, Proceedings of the National Academy of Sciences.

[34]  Lars-Oliver Essen,et al.  The structure of a complete phytochrome sensory module in the Pr ground state , 2008, Proceedings of the National Academy of Sciences.

[35]  Keith Moffat,et al.  Crystal structure of Pseudomonas aeruginosa bacteriophytochrome: Photoconversion and signal transduction , 2008, Proceedings of the National Academy of Sciences.

[36]  G. Choi,et al.  Decoding of light signals by plant phytochromes and their interacting proteins. , 2008, Annual review of plant biology.

[37]  K. Schmidt,et al.  Gas dynamic virtual nozzle for generation of microscopic droplet streams , 2008, 0803.4181.

[38]  R. Vierstra,et al.  High Resolution Structure of Deinococcus Bacteriophytochrome Yields New Insights into Phytochrome Architecture and Evolution* , 2007, Journal of Biological Chemistry.

[39]  R. Vierstra,et al.  A light-sensing knot revealed by the structure of the chromophore-binding domain of phytochrome , 2005, Nature.

[40]  J. Hajdu,et al.  Potential for biomolecular imaging with femtosecond X-ray pulses , 2000, Nature.

[41]  R. Vierstra,et al.  Bacteriophytochromes: phytochrome-like photoreceptors from nonphotosynthetic eubacteria. , 1999, Science.

[42]  Wolfgang Kabsch,et al.  Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants , 1993 .

[43]  P. Afonine,et al.  research papers Acta Crystallographica Section D Biological , 2003 .

[44]  Randy J Read,et al.  Electronic Reprint Biological Crystallography Likelihood-enhanced Fast Rotation Functions Biological Crystallography Likelihood-enhanced Fast Rotation Functions , 2003 .