Differential methylation between ethnic sub-groups reflects the effect of genetic ancestry and environmental exposures
暂无分享,去创建一个
Noah Zaitlen | Max A Seibold | Esteban G Burchard | Celeste Eng | Donglei Hu | Rajesh Kumar | Scott Huntsman | Dara Torgerson | Christopher R. Gignoux | E. Burchard | W. Rodriguez-Cintron | Sam S. Oh | J. Galanter | N. Thakur | M. Pino-Yanes | L. Borrell | N. Zaitlen | C. Eng | D. Hu | C. Gignoux | D. Torgerson | J. Rodriguez-Santana | Kelly Meade | E. Brigino-Buenaventura | M. Lenoir | R. Kumar | D. Serebrisky | H. Farber | P. Avila | M. Seibold | Christopher R Gignoux | Harold J Farber | Joshua M Galanter | Sam S Oh | Pedro C Avila | Michael A LeNoir | Denise Serebrisky | Luisa N Borrell | William Rodríguez-Cintrón | Maria Pino-Yanes | Neeta Thakur | Emerita Brigino-Buenaventura | Kelly Meade | Jose R Rodríguez-Santana | Scott Huntsmann | Emerita Brigino-Buenaventura
[1] Pedro C. Avila,et al. Fast and accurate inference of local ancestry in Latino populations , 2012, Bioinform..
[2] D. Reich,et al. Strong association of socioeconomic status with genetic ancestry in Latinos: implications for admixture studies of type 2 diabetes , 2009, Diabetologia.
[3] Gabor T. Marth,et al. An integrated map of structural variation in 2,504 human genomes , 2015, Nature.
[4] E. Ziv,et al. Genetic Ancestry and Risk Factors for Breast Cancer among Latinas in the San Francisco Bay Area , 2006, Cancer Epidemiology Biomarkers & Prevention.
[5] Kosuke Imai,et al. mediation: R Package for Causal Mediation Analysis , 2014 .
[6] Tom R. Gaunt,et al. Epigenome-wide association of DNA methylation markers in peripheral blood from Indian Asians and Europeans with incident type 2 diabetes: a nested case-control study. , 2015, The lancet. Diabetes & endocrinology.
[7] Zachary A. Szpiech,et al. Genome-wide association studies in diverse populations , 2010, Nature Reviews Genetics.
[8] Christopher R. Gignoux,et al. The genetics of Mexico recapitulates Native American substructure and affects biomedical traits , 2014, Science.
[9] Charles Auffray,et al. DNA Methylation in Newborns and Maternal Smoking in Pregnancy: Genome-wide Consortium Meta-analysis. , 2016, American journal of human genetics.
[10] C. A. Fleming,et al. The Acquisition of Data , 1969 .
[11] L. Borrell. Racial identity among Hispanics: implications for health and well-being. , 2005, American journal of public health.
[12] M. Nalls,et al. Admixture mapping of white cell count: genetic locus responsible for lower white blood cell count in the Health ABC and Jackson Heart studies. , 2008, American journal of human genetics.
[13] S W Scherer,et al. EBV transformation and cell culturing destabilizes DNA methylation in human lymphoblastoid cell lines. , 2010, Genomics.
[14] Ian M. Morison,et al. Integrated Genetic and Epigenetic Analysis Identifies Haplotype-Specific Methylation in the FTO Type 2 Diabetes and Obesity Susceptibility Locus , 2010, PloS one.
[15] S. Tishkoff,et al. Taking race out of human genetics , 2016, Science.
[16] Eran Halperin,et al. Sparse PCA corrects for cell type heterogeneity in epigenome-wide association studies , 2016, Nature Methods.
[17] R Core Team,et al. R: A language and environment for statistical computing. , 2014 .
[18] R. Cooper,et al. Race and genomics. , 2003, The New England journal of medicine.
[19] E. Phimister. Medicine and the racial divide. , 2003, New England Journal of Medicine.
[20] Susan K. Murphy,et al. 450K Epigenome-Wide Scan Identifies Differential DNA Methylation in Newborns Related to Maternal Smoking during Pregnancy , 2012, Environmental health perspectives.
[21] Christopher R. Gignoux,et al. Socioeconomic status and childhood asthma in urban minority youths. The GALA II and SAGE II studies. , 2013, American journal of respiratory and critical care medicine.
[22] R. Klocke,et al. THE AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE , 1994 .
[23] David H. Alexander,et al. Fast model-based estimation of ancestry in unrelated individuals. , 2009, Genome research.
[24] G. Evans,et al. Socioeconomic status and health: the potential role of environmental risk exposure. , 2002, Annual review of public health.
[25] Christopher R. Gignoux,et al. Development of a Panel of Genome-Wide Ancestry Informative Markers to Study Admixture Throughout the Americas , 2012, PLoS genetics.
[26] N. Risch,et al. The importance of race and ethnic background in biomedical research and clinical practice. , 2003, The New England journal of medicine.
[27] Carrie V. Breton,et al. Maternal smoking in pregnancy and DNA methylation in newborns: Genome-wide consortium meta-analysis , 2016 .
[28] Alkes L. Price,et al. Strong Association of Socioeconomic Status and Genetic Ancestry in Latinos , 2011 .
[29] Martin J. Aryee,et al. Epigenome-wide association data implicate DNA methylation as an intermediary of genetic risk in Rheumatoid Arthritis , 2013, Nature Biotechnology.
[30] E. Burchard,et al. Effect of secondhand smoke on asthma control among black and Latino children. , 2012, The Journal of allergy and clinical immunology.
[31] Alex P. Reiner,et al. Genetic ancestry in lung-function predictions. , 2010, The New England journal of medicine.
[32] B. Bradley,et al. Post-traumatic stress disorder is associated with PACAP and the PAC1 receptor , 2011, Nature.
[33] Rui Mei,et al. Latino populations: a unique opportunity for the study of race, genetics, and social environment in epidemiological research. , 2005, American journal of public health.
[34] W. McArdle,et al. Associations with early-life socio-economic position in adult DNA methylation. , 2012, International journal of epidemiology.
[35] Richard T. Barfield,et al. Accounting for Population Stratification in DNA Methylation Studies , 2014, Genetic epidemiology.
[36] M. Skinner. Environmental Epigenetics , 2015, Environmental epigenetics.
[37] M. Kobor,et al. Short-term diesel exhaust inhalation in a controlled human crossover study is associated with changes in DNA methylation of circulating mononuclear cells in asthmatics , 2014, Particle and Fibre Toxicology.
[38] J. Hudziak,et al. Glucocorticoid receptor gene (NR3C1) methylation following stressful events between birth and adolescence. The TRAILS study , 2014, Translational Psychiatry.
[39] 喬 嶋本. Nested Case-control Study , 1992, Definitions.
[40] Hua Tang,et al. Categorization of humans in biomedical research: genes, race and disease , 2002, Genome Biology.
[41] J. Segrest,et al. Science and Society. , 1973, Nature.
[42] M. Udler,et al. Effect of Genetic African Ancestry on eGFR and Kidney Disease. , 2015, Journal of the American Society of Nephrology : JASN.
[43] Ryan D. Hernandez,et al. Classic Selective Sweeps Were Rare in Recent Human Evolution , 2011, Science.
[44] Eldon Emberly,et al. Factors underlying variable DNA methylation in a human community cohort , 2012, Proceedings of the National Academy of Sciences.
[45] F. Gilliland,et al. Native American ancestry affects the risk for gene methylation in the lungs of Hispanic smokers from New Mexico. , 2013, American journal of respiratory and critical care medicine.
[46] Carlos Bustamante,et al. Genome-wide association study and admixture mapping identify different asthma-associated loci in Latinos: the Genes-environments & Admixture in Latino Americans study. , 2014, The Journal of allergy and clinical immunology.
[47] Pui-Yan Kwok,et al. Design and coverage of high throughput genotyping arrays optimized for individuals of East Asian, African American, and Latino race/ethnicity using imputation and a novel hybrid SNP selection algorithm. , 2011, Genomics.
[48] Xiao Zhang,et al. Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis , 2010, BMC Bioinformatics.
[49] B. Bradley,et al. Post-traumatic stress disorder is associated with PACAP and the PAC1 receptor , 2011, Nature.
[50] E. Iversen,et al. Maternal Stress, Preterm Birth, and DNA Methylation at Imprint Regulatory Sequences in Humans , 2014, Genetics & epigenetics.
[51] Li Yu,et al. [DNA methylation and cancer]. , 2005, Zhonghua nei ke za zhi.
[52] Kiang Liu,et al. Pulmonary Disease and Age at Immigration among Hispanics. Results from the Hispanic Community Health Study/Study of Latinos. , 2016, American journal of respiratory and critical care medicine.
[53] Zachary D. Smith,et al. DNA methylation: roles in mammalian development , 2013, Nature Reviews Genetics.
[54] Jing He,et al. Trans-ancestry genome-wide association study identifies 12 genetic loci influencing blood pressure and implicates a role for DNA methylation , 2015, Nature Genetics.
[55] J L Hankinson,et al. Spirometric reference values from a sample of the general U.S. population. , 1999, American journal of respiratory and critical care medicine.
[56] P. Pohunek. Faculty Opinions recommendation of Multi-ethnic reference values for spirometry for the 3-95-yr age range: the global lung function 2012 equations. , 2013 .
[57] Sang-Woon Choi,et al. Cardiovascular epigenetics: from DNA methylation to microRNAs. , 2013, Molecular aspects of medicine.
[58] D. Reich,et al. Population Structure and Eigenanalysis , 2006, PLoS genetics.
[59] Kenny Q. Ye,et al. An integrated map of genetic variation from 1,092 human genomes , 2012, Nature.
[60] Rui Mei,et al. Recent genetic selection in the ancestral admixture of Puerto Ricans. , 2007, American journal of human genetics.
[61] Alexandra M. Binder,et al. Recommendations for the design and analysis of epigenome-wide association studies , 2013, Nature Methods.
[62] Yuet-Kin Leung,et al. Environmental epigenetics and its implication on disease risk and health outcomes. , 2012, ILAR journal.
[63] Esteban G Burchard,et al. Early-life air pollution and asthma risk in minority children. The GALA II and SAGE II studies. , 2013, American journal of respiratory and critical care medicine.
[64] W. Chou,et al. Race and health profiles in the United States: an examination of the social gradient through the 2009 CHIS adult survey. , 2014, Public health.
[65] A. Baccarelli,et al. ADCYAP1R1 and asthma in Puerto Rican children. , 2013, American journal of respiratory and critical care medicine.
[66] S. Stanojevic,et al. Multi-ethnic reference values for spirometry for the 3–95-yr age range: the global lung function 2012 equations , 2012, European Respiratory Journal.
[67] M. Fraga,et al. Epigenetics and the environment: emerging patterns and implications , 2012, Nature Reviews Genetics.
[68] Devin C. Koestler,et al. DNA methylation arrays as surrogate measures of cell mixture distribution , 2012, BMC Bioinformatics.
[69] H. Ostrer,et al. Genome-wide patterns of population structure and admixture among Hispanic/Latino populations , 2010, Proceedings of the National Academy of Sciences.
[70] P. Hof,et al. The epigenetics of aging and neurodegeneration , 2015, Progress in Neurobiology.