Gene Expression Noise Enhances Robust Organization of the Early Mammalian Blastocyst
暂无分享,去创建一个
Tao Peng | Qing Nie | Huijing Du | William R. Holmes | Michael Chiang | Nabora de Mochel | Ken Cho | Olivier Cinquin | Qixuan Wang | Ken W. Y. Cho | W. Holmes | O. Cinquin | Q. Nie | Michael Chiang | Qixuan Wang | Tao Peng | H. Du
[1] Chi-Wei Lu,et al. Cross-regulation of the Nanog and Cdx2 promoters , 2009, Cell Research.
[2] Takashi Hiiragi,et al. Computer simulation of emerging asymmetry in the mouse blastocyst , 2008, Development.
[3] Periklis Pantazis,et al. Oct4 kinetics predict cell lineage patterning in the early mammalian embryo , 2011, Nature Cell Biology.
[4] Yuriy L Orlov,et al. Eset partners with Oct4 to restrict extraembryonic trophoblast lineage potential in embryonic stem cells. , 2009, Genes & development.
[5] J. Rossant,et al. Potential of isolated mouse inner cell masses to form trophectoderm derivatives in vivo. , 1979, Developmental biology.
[6] D. Riethmacher,et al. A targeted mutation in the mouse E-cadherin gene results in defective preimplantation development. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[7] Carsten Peterson,et al. Transcriptional Dynamics of the Embryonic Stem Cell Switch , 2006, PLoS Comput. Biol..
[8] Qing Nie,et al. Noise drives sharpening of gene expression boundaries in the zebrafish hindbrain , 2012, Molecular systems biology.
[9] T. Newman,et al. Grid-free models of multicellular systems, with an application to large-scale vortices accompanying primitive streak formation. , 2008, Current topics in developmental biology.
[10] A. Spindle,et al. Trophoblast regeneration by inner cell masses isolated from cultured mouse embryos. , 1978, The Journal of experimental zoology.
[11] J. Nichols,et al. Functional Expression Cloning of Nanog, a Pluripotency Sustaining Factor in Embryonic Stem Cells , 2003, Cell.
[12] Mikael Huss,et al. Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. , 2010, Developmental cell.
[13] Sui Huang,et al. Bifurcation dynamics in lineage-commitment in bipotent progenitor cells. , 2007, Developmental biology.
[14] Kwang-Hyun Cho,et al. The regulatory circuits for hysteretic switching in cellular signal transduction pathways , 2012, The FEBS journal.
[15] Wing H Wong,et al. An Oct 4-Sall 4-Nanog network controls developmental progression in the preimplantation mouse embryo , 2013 .
[16] R. Grima,et al. Many-body theory of chemotactic cell-cell interactions. , 2004, Physical review. E, Statistical, nonlinear, and soft matter physics.
[17] H. Schöler,et al. Formation of Pluripotent Stem Cells in the Mammalian Embryo Depends on the POU Transcription Factor Oct4 , 1998, Cell.
[18] Magdalena Zernicka-Goetz,et al. Spatial arrangement of individual 4-cell stage blastomeres and the order in which they are generated correlate with blastocyst pattern in the mouse embryo , 2005, Mechanisms of Development.
[19] Carsten Peterson,et al. Simulating the Mammalian Blastocyst - Molecular and Mechanical Interactions Pattern the Embryo , 2011, PLoS Comput. Biol..
[20] J. Rossant,et al. Genetic regulation of stem cell origins in the mouse embryo , 2005, Clinical genetics.
[21] Brian Munsky,et al. Transcription Factors Modulate c-Fos Transcriptional Bursts , 2014, Cell reports.
[22] W. Tian,et al. Identification of osteo–adipo progenitor cells in fat tissue , 2008, Cell proliferation.
[23] M. Takeichi,et al. The calcium-dependent cell-cell adhesion system regulates inner cell mass formation and cell surface polarization in early mouse development , 1983, Cell.
[24] Janet Rossant,et al. Disorganized epithelial polarity and excess trophectoderm cell fate in preimplantation embryos lacking E-cadherin , 2010, Development.
[25] B. Mintz,et al. FORMATION OF GENETICALLY MOSAIC MOUSE EMBRYOS, AND EARLY DEVELOPMENT OF "LETHAL (T12/T12)-NORMAL" MOSAICS. , 1964, The Journal of experimental zoology.
[26] Magdalena Zernicka-Goetz,et al. Role for sperm in spatial patterning of the early mouse embryo , 2001, Nature.
[27] Yoko Kurotaki,et al. Analysis of cell lineage in two- and four-cell mouse embryos , 2003, Development.
[28] Sui Huang. Reprogramming cell fates: reconciling rarity with robustness , 2009, BioEssays : news and reviews in molecular, cellular and developmental biology.
[29] A. Tarkowski,et al. Mouse Chimæras Developed from Fused Eggs , 1961, Nature.
[30] Jie Qiao,et al. Dynamic transcriptional symmetry-breaking in pre-implantation mammalian embryo development revealed by single-cell RNA-seq , 2015, Development.
[31] E. O’Shea,et al. Noise in protein expression scales with natural protein abundance , 2006, Nature Genetics.
[32] Yojiro Yamanaka,et al. Initiation of Hippo signaling is linked to polarity rather than to cell position in the pre-implantation mouse embryo , 2014, Development.
[33] Guoji Guo,et al. Role of Cdx2 and cell polarity in cell allocation and specification of trophectoderm and inner cell mass in the mouse embryo. , 2008, Genes & development.
[34] M H Johnson,et al. Cell interactions influence the fate of mouse blastomeres undergoing the transition from the 16- to the 32-cell stage. , 1983, Developmental biology.
[35] Sudhansu K. Dey,et al. Roadmap to embryo implantation: clues from mouse models , 2006, Nature Reviews Genetics.
[36] Wing H Wong,et al. An Oct4-Sall4-Nanog network controls developmental progression in the pre-implantation mouse embryo , 2013, Molecular systems biology.
[37] François Nédélec,et al. Asymmetric division of contractile domains couples cell positioning and fate specification , 2016, Nature.
[38] Yang Luo,et al. Cell signalling regulates dynamics of Nanog distribution in embryonic stem cell populations , 2013, Journal of The Royal Society Interface.
[39] Janet Rossant,et al. The Crumbs complex couples cell density sensing to Hippo-dependent control of the TGF-β-SMAD pathway. , 2010, Developmental cell.
[40] W. Silvers,et al. "Intrinsic" Immunological Tolerance in Allophenic Mice , 1967, Science.
[41] R. Gardner,et al. The case for prepatterning in the mouse. , 2005, Birth defects research. Part C, Embryo today : reviews.
[42] Periklis Pantazis,et al. Oct4 kinetics predict cell lineage patterning in the early mammalian embryo , 2011, Nature Cell Biology.
[43] Barry Behr,et al. Altered subcellular localization of transcription factor TEAD4 regulates first mammalian cell lineage commitment , 2012, Proceedings of the National Academy of Sciences.
[44] J. Rossant,et al. Gata3 regulates trophoblast development downstream of Tead4 and in parallel to Cdx2 , 2010, Development.
[45] F. Tang,et al. Dynamic equilibrium and heterogeneity of mouse pluripotent stem cells with distinct functional and epigenetic states. , 2008, Cell stem cell.
[46] Janet Rossant,et al. Cdx2 acts downstream of cell polarization to cell-autonomously promote trophectoderm fate in the early mouse embryo. , 2008, Developmental biology.
[47] Magdalena Zernicka-Goetz,et al. Formation of the embryonic-abembryonic axis of the mouse blastocyst: relationships between orientation of early cleavage divisions and pattern of symmetric/asymmetric divisions , 2008, Development.
[48] Magdalena Zernicka-Goetz,et al. Angiomotin prevents pluripotent lineage differentiation in mouse embryos via Hippo pathway-dependent and -independent mechanisms , 2013, Nature Communications.
[49] J. Marioni,et al. Heterogeneity in Oct4 and Sox2 Targets Biases Cell Fate in 4-Cell Mouse Embryos , 2016, Cell.
[50] A. Tarkowski,et al. Experiments on the Development of Isolated Blastomeres of Mouse Eggs , 1959, Nature.
[51] Valeria Levi,et al. Long-Lived Binding of Sox2 to DNA Predicts Cell Fate in the Four-Cell Mouse Embryo , 2016, Cell.
[52] Anna-Katerina Hadjantonakis,et al. Aggregation chimeras: combining ES cells, diploid, and tetraploid embryos. , 2009, Methods in molecular biology.
[53] Andreas Fouras,et al. Cortical Tension Allocates the First Inner Cells of the Mammalian Embryo. , 2015, Developmental cell.
[54] Shinji Yamamoto,et al. Tead4 is required for specification of trophectoderm in pre-implantation mouse embryos , 2008, Mechanisms of Development.
[55] Shankar Srinivas,et al. Limited predictive value of blastomere angle of division in trophectoderm and inner cell mass specification , 2014, Development.
[56] Jeff W. Lichtman,et al. Developmental Bias in Cleavage-Stage Mouse Blastomeres , 2013, Current Biology.
[57] Avi Ma’ayan,et al. Systems biology of stem cell fate and cellular reprogramming , 2009, Nature Reviews Molecular Cell Biology.
[58] T. Zwaka,et al. Keeping the Noise Down in ES Cells , 2006, Cell.
[59] Tristan Frum,et al. Oct4 cell-autonomously promotes primitive endoderm development in the mouse blastocyst. , 2013, Developmental cell.
[60] J. C. Fierro-González,et al. Cadherin-dependent filopodia control preimplantation embryo compaction , 2013, Nature Cell Biology.
[61] Yixian Zheng,et al. Generation and live imaging of an endogenous Cdx2 reporter mouse line , 2012, Genesis.
[62] S. Bissière,et al. Cadherin-dependent filopodia control preimplantation embryo compaction , 2013, Nature Cell Biology.
[63] R. Gardner,et al. Specification of embryonic axes begins before cleavage in normal mouse development. , 2001, Development.
[64] Meng Chen,et al. Noise Attenuation in the ON and OFF States of Biological Switches , 2013, ACS synthetic biology.
[65] Janet Rossant,et al. Blastocyst lineage formation, early embryonic asymmetries and axis patterning in the mouse , 2009, Development.
[66] D. Gillespie. The chemical Langevin equation , 2000 .
[67] Janet Rossant,et al. Cdx 2 acts downstream of cell polarization to cell-autonomously promote trophectoderm fate in the early mouse embryo , 2008 .
[68] J. Rossant,et al. Ability of outside cells from preimplantation mouse embryos to form inner cell mass derivatives. , 1980, Developmental biology.
[69] A. Oudenaarden,et al. Feedback Control of Gene Expression Variability in the Caenorhabditis elegans Wnt Pathway , 2013, Cell.
[70] Janet Rossant,et al. The Hippo signaling pathway components Lats and Yap pattern Tead4 activity to distinguish mouse trophectoderm from inner cell mass. , 2009, Developmental cell.
[71] Niall Dillon,et al. The Proteasome Restricts Permissive Transcription at Tissue-Specific Gene Loci in Embryonic Stem Cells , 2006, Cell.
[72] Megan F. Cole,et al. Core Transcriptional Regulatory Circuitry in Human Embryonic Stem Cells , 2005, Cell.
[73] Tristan Frum,et al. Maternal Cdx2 is dispensable for mouse development , 2012, Development.
[74] T. Newman,et al. Modeling multicellular systems using subcellular elements. , 2005, Mathematical biosciences and engineering : MBE.
[75] Sujoy Ganguly,et al. Asymmetric Localization of Cdx2 mRNA during the First Cell-Fate Decision in Early Mouse Development , 2013, Cell reports.
[76] Nancy Papalopulu,et al. Downregulation of Par3 and aPKC function directs cells towards the ICM in the preimplantation mouse embryo , 2005, Journal of Cell Science.
[77] Janet Rossant,et al. Interaction between Oct3/4 and Cdx2 Determines Trophectoderm Differentiation , 2005, Cell.
[78] Janet Rossant,et al. Cdx2 is required for correct cell fate specification and differentiation of trophectoderm in the mouse blastocyst , 2005, Development.
[79] A Nagy,et al. Aggregation chimeras. Combining ES cells, diploid and tetraploid embryos. , 2001, Methods in molecular biology.
[80] Qing Nie,et al. Computational modelling of epidermal stratification highlights the importance of asymmetric cell division for predictable and robust layer formation , 2014, Journal of The Royal Society Interface.
[81] Takashi Hiiragi,et al. Stochastic patterning in the mouse pre-implantation embryo , 2007, Development.
[82] Kazuhiro Chida,et al. Polarity-Dependent Distribution of Angiomotin Localizes Hippo Signaling in Preimplantation Embryos , 2013, Current Biology.
[83] Janet Rossant,et al. Gata 3 regulates trophoblast development downstream of Tead 4 and in parallel to Cdx 2 , 2022 .
[84] C. Ziomek,et al. The foundation of two distinct cell lineages within the mouse morula , 1981, Cell.
[85] Carsten Peterson,et al. A Computational Model for Understanding Stem Cell, Trophectoderm and Endoderm Lineage Determination , 2008, PloS one.
[86] Patrick S. Stumpf,et al. Nanog-dependent feedback loops regulate murine embryonic stem cell heterogeneity , 2012, Nature Cell Biology.