Cengage Learning at TREC 2011 Medical Track

This paper details Cengage Learning’s submissions for this year’s TREC medical track. The techniques we used fall roughly into two categories: information extraction and query expansion. From both the queries and the medical reports, we extracted limiting attributes, such as age, race, and gender, and labeled terms appearing in the Unified Medical Language System (UMLS). We also used three different techniques of query expansion: UMLS related terms, terms from a network built from UMLS, and terms from our medical reference encyclopedias. We submitted four different runs varying only in their methods of query expansion.

[1]  D. Lindberg,et al.  Unified Medical Language System , 2020, Definitions.

[2]  George Hripcsak,et al.  Natural language processing in an operational clinical information system , 1995, Natural Language Engineering.

[3]  J. J. Rocchio,et al.  Relevance feedback in information retrieval , 1971 .

[4]  Wendy W. Chapman,et al.  A Simple Algorithm for Identifying Negated Findings and Diseases in Discharge Summaries , 2001, J. Biomed. Informatics.

[5]  Peter L. Elkin,et al.  UMLS Concept Indexing for Production Databases: A Feasibility Study , 2001, J. Am. Medical Informatics Assoc..

[6]  Cynthia Brandt,et al.  Research Paper: UMLS Concept Indexing for Production Databases: A Feasibility Study , 2001, J. Am. Medical Informatics Assoc..

[7]  D. T. Heinze,et al.  LifeCode: A Deployed Application for Automated Medical Coding , 2001, AI Mag..

[8]  Pushpak Bhattacharyya,et al.  Multilingual Pseudo-Relevance Feedback: Performance Study of Assisting Languages , 2010, ACL.

[9]  Allan Hanbury,et al.  Scaling Up High-Value Retrieval to Medium-Volume Data , 2010, IRFC.

[10]  ChengXiang Zhai,et al.  Positional relevance model for pseudo-relevance feedback , 2010, SIGIR.

[11]  Daniel L. Rubin,et al.  Evaluation of Negation and Uncertainty Detection and its Impact on Precision and Recall in Search , 2009, Journal of Digital Imaging.

[12]  Prakash M. Nadkarni,et al.  Research Paper: Use of General-purpose Negation Detection to Augment Concept Indexing of Medical Documents: A Quantitative Study Using the UMLS , 2001, J. Am. Medical Informatics Assoc..