Mail-Order Metal–Organic Frameworks (MOFs): Designing Isoreticular MOF-5 Analogues Comprising Commercially Available Organic Molecules

Metal–organic frameworks (MOFs), a class of porous materials, are of particular interest in gas storage and separation applications due largely to their high internal surface areas and tunable structures. MOF-5 is perhaps the archetypal MOF; in particular, many isoreticular analogues of MOF-5 have been synthesized, comprising alternative dicarboxylic acid ligands. In this contribution we introduce a new set of hypothesized MOF-5 analogues, constructed from commercially available organic molecules. We describe our automated procedure for hypothetical MOF design, comprising selection of appropriate ligands, construction of 3D structure models, and structure relaxation methods. 116 MOF-5 analogues were designed and characterized in terms of geometric properties and simulated methane uptake at conditions relevant to vehicular storage applications. A strength of the presented approach is that all of the hypothesized MOFs are designed to be synthesizable utilizing ligands purchasable online.

[1]  A. Bondi van der Waals Volumes and Radii , 1964 .

[2]  A. Cottrell An Introduction to Metallurgy , 2019 .

[3]  W. Goddard,et al.  UFF, a full periodic table force field for molecular mechanics and molecular dynamics simulations , 1992 .

[4]  Thomas A. Halgren Merck molecular force field. I. Basis, form, scope, parameterization, and performance of MMFF94 , 1996, J. Comput. Chem..

[5]  Robin Taylor,et al.  Intermolecular Nonbonded Contact Distances in Organic Crystal Structures: Comparison with Distances Expected from van der Waals Radii , 1996 .

[6]  T. Halgren Merck molecular force field. I. Basis, form, scope, parameterization, and performance of MMFF94 , 1996, J. Comput. Chem..

[7]  M. O'keeffe,et al.  Design and synthesis of an exceptionally stable and highly porous metal-organic framework , 1999, Nature.

[8]  J. Ilja Siepmann,et al.  Vapor–liquid equilibria of mixtures containing alkanes, carbon dioxide, and nitrogen , 2001 .

[9]  D. Frenkel,et al.  Understanding molecular simulation : from algorithms to applications. 2nd ed. , 2002 .

[10]  Michael O'Keeffe,et al.  Systematic Design of Pore Size and Functionality in Isoreticular MOFs and Their Application in Methane Storage , 2002, Science.

[11]  F. Allen The Cambridge Structural Database: a quarter of a million crystal structures and rising. , 2002, Acta crystallographica. Section B, Structural science.

[12]  Michael O'Keeffe,et al.  Reticular synthesis and the design of new materials , 2003, Nature.

[13]  Michael O'Keeffe,et al.  Hydrogen Storage in Microporous Metal-Organic Frameworks , 2003, Science.

[14]  Michael O'Keeffe,et al.  A route to high surface area, porosity and inclusion of large molecules in crystals , 2004, Nature.

[15]  Omar M Yaghi,et al.  Hydrogen sorption in functionalized metal-organic frameworks. , 2004, Journal of the American Chemical Society.

[16]  Randall Q Snurr,et al.  Effects of surface area, free volume, and heat of adsorption on hydrogen uptake in metal-organic frameworks. , 2006, The journal of physical chemistry. B.

[17]  J. Stewart Optimization of parameters for semiempirical methods V: Modification of NDDO approximations and application to 70 elements , 2007, Journal of molecular modeling.

[18]  David S. Sholl,et al.  Screening metal-organic framework materials for membrane-based methane/carbon dioxide separations , 2007 .

[19]  Thorsten Meinl,et al.  KNIME: The Konstanz Information Miner , 2007, GfKl.

[20]  M. O'keeffe,et al.  The Reticular Chemistry Structure Resource (RCSR) database of, and symbols for, crystal nets. , 2008, Accounts of chemical research.

[21]  Iosif I. Vaisman,et al.  Identifying Zeolite Frameworks with a Machine Learning Approach , 2009 .

[22]  Hong-Cai Zhou,et al.  Selective gas adsorption and separation in metal-organic frameworks. , 2009, Chemical Society reviews.

[23]  Omar K Farha,et al.  Metal-organic framework materials as catalysts. , 2009, Chemical Society reviews.

[24]  Stefano de Gironcoli,et al.  QUANTUM ESPRESSO: a modular and open-source software project for quantum simulations of materials , 2009, Journal of physics. Condensed matter : an Institute of Physics journal.

[25]  Mircea Dincă,et al.  Hydrogen storage in metal-organic frameworks. , 2009, Chemical Society reviews.

[26]  Patrice Koehl,et al.  Molecular Force Fields , 2009 .

[27]  Christian J. Doonan,et al.  Multiple Functional Groups of Varying Ratios in Metal-Organic Frameworks , 2010, Science.

[28]  Jingjing Cai,et al.  Synthesis and characterization of the interpenetrated MOF-5 , 2010 .

[29]  Pavel Hobza,et al.  A Transferable H-Bonding Correction for Semiempirical Quantum-Chemical Methods. , 2010, Journal of chemical theory and computation.

[30]  Sankar Nair,et al.  Efficient calculation of diffusion limitations in metal organic framework materials: a tool for identifying materials for kinetic separations. , 2010, Journal of the American Chemical Society.

[31]  D. Sholl,et al.  Molecular Simulations and Theoretical Predictions for Adsorption and Diffusion of CH4/H2 and CO2/CH4 Mixtures in ZIFs , 2011 .

[32]  Chris Morley,et al.  Open Babel: An open chemical toolbox , 2011, J. Cheminformatics.

[33]  C. Wilmer,et al.  Large-scale screening of hypothetical metal-organic frameworks. , 2012, Nature chemistry.

[34]  C. Wilmer,et al.  Thermodynamic analysis of Xe/Kr selectivity in over 137 000 hypothetical metal–organic frameworks , 2012 .

[35]  Michael O'Keeffe,et al.  Deconstructing the crystal structures of metal-organic frameworks and related materials into their underlying nets. , 2012, Chemical reviews.

[36]  J. Long,et al.  Introduction to metal-organic frameworks. , 2012, Chemical reviews.

[37]  Omar K Farha,et al.  Metal-organic framework materials with ultrahigh surface areas: is the sky the limit? , 2012, Journal of the American Chemical Society.

[38]  L. Sarkisov Accessible Surface Area of Porous Materials: Understanding Theoretical Limits , 2012, Advanced materials.

[39]  Maciej Haranczyk,et al.  Addressing Challenges of Identifying Geometrically Diverse Sets of Crystalline Porous Materials , 2012, J. Chem. Inf. Model..

[40]  Kenji Sumida,et al.  Carbon dioxide capture in metal-organic frameworks. , 2012, Chemical reviews.

[41]  Maciej Haranczyk,et al.  Algorithms and tools for high-throughput geometry-based analysis of crystalline porous materials , 2012 .

[42]  Hong‐Cai Zhou,et al.  Methane Storage in Advanced Porous Materials , 2013 .

[43]  Richard L. Martin,et al.  Exploring frontiers of high surface area metal–organic frameworks , 2013 .