High-resolution synchrotron-based X-ray microtomography as a tool to unveil the three-dimensional neuronal architecture of the brain

[1]  José-Angel Conchello,et al.  Fluorescence microscopy , 2005, Nature Methods.

[2]  F. Pfeiffer,et al.  Three-dimensional virtual histology enabled through cytoplasm-specific X-ray stain for microscopic and nanoscopic computed tomography , 2018, Proceedings of the National Academy of Sciences.

[3]  Elias S. Helou,et al.  A Backprojection Slice Theorem for Tomographic Reconstruction , 2018, IEEE Transactions on Image Processing.

[4]  R. F. C. Vescovi,et al.  Radiography registration for mosaic tomography. , 2017, Journal of synchrotron radiation.

[5]  Tim Salditt,et al.  Three-dimensional mouse brain cytoarchitecture revealed by laboratory-based x-ray phase-contrast tomography , 2017, Scientific Reports.

[6]  Eduardo X. Miqueles,et al.  Fast Backprojection Techniques for High Resolution Tomography , 2016, 1608.03589.

[7]  Konrad P. Körding,et al.  Quantifying Mesoscale Neuroanatomy Using X-Ray Microtomography , 2016, eNeuro.

[8]  A. Kaindl,et al.  Golgi-Cox Staining Step by Step , 2016, Front. Neuroanat..

[9]  O. Witte,et al.  Consistent and reproducible staining of glia by a modified Golgi–Cox method , 2015, Journal of Neuroscience Methods.

[10]  P Cloetens,et al.  Myelinated mouse nerves studied by X-ray phase contrast zoom tomography. , 2015, Journal of structural biology.

[11]  A. Takeuchi,et al.  Scanning Brain Networks with Micro-CT , 2015, Microscopy Today.

[12]  Frank Lindseth,et al.  Medical image segmentation on GPUs - A comprehensive review , 2015, Medical Image Anal..

[13]  Sareesh Naduvil Narayanan,et al.  Appraisal of the effect of brain impregnation duration on neuronal staining and morphology in a modified Golgi–Cox method , 2014, Journal of Neuroscience Methods.

[14]  E. Cavalheiro,et al.  Decreased expression of proteins involved in energy metabolism in the hippocampal granular layer of rats submitted to the pilocarpine epilepsy model , 2014, Neuroscience Letters.

[15]  Kentaro Uesugi,et al.  Three-dimensional network of Drosophila brain hemisphere. , 2013, Journal of structural biology.

[16]  Srinivas C. Turaga,et al.  Connectomic reconstruction of the inner plexiform layer in the mouse retina , 2013, Nature.

[17]  Alan C. Evans,et al.  BigBrain: An Ultrahigh-Resolution 3D Human Brain Model , 2013, Science.

[18]  M. Helmstaedter.  Cellular-resolution connectomics: challenges of dense neural circuit reconstruction , 2013, Nature Methods.

[19]  W. Denk,et al.  Staining and embedding the whole mouse brain for electron microscopy , 2012, Nature Methods.

[20]  Frederico A. C. Azevedo,et al.  How many neurons do you have? Some dogmas of quantitative neuroscience under revision , 2012, The European journal of neuroscience.

[21]  Amit Ranjan,et al.  A Modified Method for Consistent and Reliable Golgi–Cox Staining in Significantly Reduced Time , 2010, Front. Neur..

[22]  Q. Luo,et al.  Micro-Optical Sectioning Tomography to Obtain a High-Resolution Atlas of the Mouse Brain , 2010, Science.

[23]  Kentaro Uesugi,et al.  X-ray microtomographic imaging of three-dimensional structure of soft tissues. , 2008, Tissue engineering. Part C, Methods.

[24]  R. Mark Henkelman,et al.  High resolution three-dimensional brain atlas using an average magnetic resonance image of 40 adult C57Bl/6J mice , 2008, NeuroImage.

[25]  Kentaro Uesugi,et al.  Three-dimensional microtomographic imaging of human brain cortex , 2008, Brain Research.

[26]  Stephen J. Smith,et al.  Array Tomography: A New Tool for Imaging the Molecular Architecture and Ultrastructure of Neural Circuits , 2007, Neuron.

[27]  Kentaro Uesugi,et al.  Computed tomography imaging of the neuronal structure of Drosophila brain. , 2007, Journal of synchrotron radiation.

[28]  A. Schierloh,et al.  Ultramicroscopy: three-dimensional visualization of neuronal networks in the whole mouse brain , 2007, Nature Methods.

[29]  N. Kasthuri,et al.  Automating the Collection of Ultrathin Serial Sections for Large Volume TEM Reconstructions , 2006, Microscopy and Microanalysis.

[30]  Rafael Yuste,et al.  Fluorescence microscopy today , 2005, Nature Methods.

[31]  F. Del Bene,et al.  Optical Sectioning Deep Inside Live Embryos by Selective Plane Illumination Microscopy , 2004, Science.

[32]  D. Kleinfeld,et al.  All-Optical Histology Using Ultrashort Laser Pulses , 2003, Neuron.

[33]  P Cloetens,et al.  A synchrotron radiation microtomography system for the analysis of trabecular bone samples. , 1999, Medical physics.

[34]  Bryan Kolb,et al.  A method for vibratome sectioning of Golgi–Cox stained whole rat brain , 1998, Journal of Neuroscience Methods.

[35]  E. Cavalheiro,et al.  The Pilocarpine Model of Epilepsy in Mice , 1996, Epilepsia.

[36]  R. C. Collins,et al.  The functional anatomy and pathology of lithium-pilocarpine and high-dose pilocarpine seizures , 1987, Neuroscience.

[37]  S. Brenner,et al.  The structure of the nervous system of the nematode Caenorhabditis elegans. , 1986, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

[38]  J. Olney,et al.  Systemic cholinergic agents induce seizures and brain damage in lithium-treated rats. , 1983, Science.

[39]  W. H. Cox.  Imprägnation des centralen Nervensystems mit Quecksilbersalzen , 1891 .

[40]  S. R. Cajal,et al.  Estructura de los centros nerviosos de las Aves , 1888 .

[41]  F Busch,et al.  X-ray computed microtomography (microCT) using synchrotron radiation (SR). , 1996, Progress in biophysics and molecular biology.

[42]  Ulrich Bonse,et al.  X-ray computed microtomography (μCT) using synchrotron radiation (SR) , 1996 .

[43]  I. Barajon,et al.  A comparision between rapid Golgi and Golgi-Cox impregnation methods for 3-D reconstruction of neurons at the confocal scanning laser microscope. , 1995, Italian journal of anatomy and embryology = Archivio italiano di anatomia ed embriologia.

[44]  R. Dobarzić,et al.  [Fluorescence microscopy]. , 1975, Plucne bolesti i tuberkuloza.

[45]  S. R. Y. Cajal.  The Croonian lecture.—La fine structure des centres nerveux , 1894 .