Testing the performances of automated identification of bat echolocation calls: A request for prudence

Echolocating bats are surveyed and studied acoustically with bat detectors routinely and worldwide, yet identification of species from calls often remains ambiguous or impossible due to intraspecific call variation and/or interspecific overlap in call design. To overcome such difficulties and to reduce workload, automated classifiers of echolocation calls have become popular, but their performance has not been tested sufficiently in the field. We examined the absolute performance of two commercially available programs (SonoChiro and Kaleidoscope) and one freeware package (BatClassify). We recorded noise from rain and calls of seven common bat species with Pettersson real-time full spectrum detectors in Sweden. The programs could always (100%) distinguish rain from bat calls, usually (68–100%) identify bats to group (Nyctalus/Vespertilio/Eptesicus, Pipistrellus, Myotis, Plecotus, Barbastella) and usually (83–99%) recognize typical calls of some species whose echolocation pulses are structurally distinct (Pipistrellus pygmaeus, Barbastella barbastellus). Species with less characteristic echolocation calls were not identified reliably, including Vespertilio murinus (16–26%), Myotis spp. (4–93%) and Plecotus auritus (0–89%). All programs showed major although different shortcomings and the often poor performance raising serious concerns about the use of automated classifiers for identification to species level in research and surveys. We highlight the importance of validating output from automated classifiers, and restricting their use to specific situations where identification can be made with high confidence. For comparison we also present the result of a manual identification test on a random subset of the files used to test the programs. It showed a higher classification success but performances were still low for more problematic taxa.

[1]  Gareth Jones,et al.  Identification of twenty‐two bat species (Mammalia: Chiroptera) from Italy by analysis of time‐expanded recordings of echolocation calls , 2002 .

[2]  Stuart Parsons,et al.  Acoustic identification of 12 species of echolocating bat by discriminant function analysis and artificial neural networks , 2000 .

[3]  S. Harris,et al.  The Switch from Low-Pressure Sodium to Light Emitting Diodes Does Not Affect Bat Activity at Street Lights , 2016, PloS one.

[4]  S. Parsons,et al.  Human vs. machine : identification of bat species from their echolocation calls by humans and by artificial neural networks , 2008 .

[5]  Joseph M. Szewczak,et al.  Detecting, recording and analysing the vocalisations of bats , 2009 .

[6]  M. Borowiec,et al.  Reproductive Status and Vocalisation in Swarming Bats Indicate a Mating Function of Swarming and an Extended Mating Period in Plecotus auritus , 2013 .

[7]  Paul A. Racey,et al.  Feeding behaviour of captive brown long-eared bats, Plecotus auritus , 1991, Animal Behaviour.

[8]  Kate E. Jones,et al.  Acoustic identification of Mexican bats based on taxonomic and ecological constraints on call design , 2016 .

[9]  Patricia W. Freeman,et al.  The Problem of Low Agreement among Automated Identification Programs for Acoustical Surveys of Bats , 2015 .

[10]  Xiaoli Z. Fern,et al.  Acoustic classification of multiple simultaneous bird species: a multi-instance multi-label approach. , 2012, The Journal of the Acoustical Society of America.

[11]  Christian Dietz,et al.  A continental-scale tool for acoustic identification of European bats , 2012 .

[12]  M. Holderied,et al.  Bat echolocation calls: adaptation and convergent evolution , 2007, Proceedings of the Royal Society B: Biological Sciences.

[13]  M. Obrist Flexible bat echolocation: the influence of individual, habitat and conspecifics on sonar signal design , 1995, Behavioral Ecology and Sociobiology.

[14]  M. Holderied,et al.  An Aerial-Hawking Bat Uses Stealth Echolocation to Counter Moth Hearing , 2010, Current Biology.

[15]  K. Frommolt,et al.  Baseline data for automated acoustic monitoring of Orthoptera in a Mediterranean landscape, the Hymettos, Greece , 2014, Journal of Insect Conservation.

[16]  S. Parsons,et al.  Acoustic identification of twelve species of echolocating bat by discriminant function analysis and artificial neural networks. , 2000, The Journal of experimental biology.

[17]  R. Barclay,et al.  Bats are not birds- a cautionary note on using echolocation calls to identify bats: a comment , 1999 .

[18]  Eva J. Lewandowski,et al.  Influence of volunteer and project characteristics on data quality of biological surveys , 2015, Conservation biology : the journal of the Society for Conservation Biology.

[19]  Christian C. Voigt,et al.  The use of automated identification of bat echolocation calls in acoustic monitoring: A cautionary note for a sound analysis , 2016 .

[20]  Michael W. Towsey,et al.  Ecology and acoustics at a large scale , 2014, Ecol. Informatics.